RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 BTN2A2Q8WVV5 523 aa11.91□□□□□ -0.5
CTNNA1-237ENST00000523275 BAP1Q92560 729 aa11.91□□□□□ -0.5
CTNNA1-237ENST00000523275 FGF11Q92914 225 aa11.91□□□□□ -0.5
CTNNA1-237ENST00000523275 VCPIP1Q96JH7 1222 aa11.91□□□□□ -0.5
CTNNA1-237ENST00000523275 C1QTNF7Q9BXJ2 289 aa11.91□□□□□ -0.5
CTNNA1-237ENST00000523275 CPEB1Q9BZB8 566 aaKnown RBP11.91□□□□□ -0.5
CTNNA1-237ENST00000523275 ABCG4Q9H172 646 aa11.91□□□□□ -0.5
CTNNA1-237ENST00000523275 DONSONQ9NYP3 566 aa11.91□□□□□ -0.5
CTNNA1-237ENST00000523275 NCKIPSDQ9NZQ3 722 aa11.91□□□□□ -0.5
CTNNA1-237ENST00000523275 KLF15Q9UIH9 416 aa11.91□□□□□ -0.5
CTNNA1-237ENST00000523275 U3KQA8 63 aa11.91□□□□□ -0.5
CTNNA1-237ENST00000523275 RIOK3O14730 519 aaKnown RBP11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 FGF10O15520 208 aaPredicted RBP11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 AQP9O43315 295 aa11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 BRINP1O60477 761 aa11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 TM7SF2O76062 418 aa11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 ATP1A3P13637 1013 aa11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 ITIH2P19823 946 aa11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 XPAP23025 273 aaPredicted RBP11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 ITPKBP27987 946 aa11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 HTR7P34969 479 aa11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 SUOXP51687 545 aa11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 YPEL5P62699 121 aa11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 OGDHQ02218 1023 aa11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 EIF2B5Q13144 721 aaKnown RBP11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 MAMLD1Q13495 774 aa11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 PTK2BQ14289 1009 aa11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 CYTH1Q15438 398 aa11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 LRRC73Q5JTD7 316 aa11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 PPP1R2P3Q6NXS1 205 aa11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 VPS36Q86VN1 386 aa11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 SNIP1Q8TAD8 396 aaKnown RBP11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 HCAR2Q8TDS4 363 aa11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 LMX1AQ8TE12 382 aa11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 CXorf40AQ8TE69 158 aa11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 CRELD1Q96HD1 420 aa11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 DEPDC7Q96QD5 511 aa11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 IL12RB2Q99665 862 aa11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 NAT10Q9H0A0 1025 aaKnown RBP11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 PARVAQ9NVD7 372 aa11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 SPASTQ9UBP0 616 aa11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 SALL4Q9UJQ4 1053 aa11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 MYO6Q9UM54 1294 aa11.9□□□□□ -0.5
CTNNA1-237ENST00000523275 BAHCC1Q9P281 2608 aa11.9□□□□□ -0.51
CTNNA1-237ENST00000523275 CHD5Q8TDI0 1954 aa11.89□□□□□ -0.51
CTNNA1-237ENST00000523275 CPED1A4D0V7 1026 aa11.89□□□□□ -0.51
CTNNA1-237ENST00000523275 TOR1BO14657 336 aa11.89□□□□□ -0.51
CTNNA1-237ENST00000523275 TPP1O14773 563 aa11.89□□□□□ -0.51
CTNNA1-237ENST00000523275 INSIG1O15503 277 aa11.89□□□□□ -0.51
CTNNA1-237ENST00000523275 NDST2P52849 883 aa11.89□□□□□ -0.51
CTNNA1-237ENST00000523275 TPI1P60174 286 aa11.89□□□□□ -0.51
CTNNA1-237ENST00000523275 ELP6Q0PNE2 266 aa11.89□□□□□ -0.51
CTNNA1-237ENST00000523275 GRM3Q14832 879 aa11.89□□□□□ -0.51
CTNNA1-237ENST00000523275 CDKN3Q16667 212 aa11.89□□□□□ -0.51
CTNNA1-237ENST00000523275 KLHL40Q2TBA0 621 aa11.89□□□□□ -0.51
CTNNA1-237ENST00000523275 DEFB133Q30KQ1 61 aa11.89□□□□□ -0.51
CTNNA1-237ENST00000523275 TMEM52BQ4KMG9 183 aa11.89□□□□□ -0.51
CTNNA1-237ENST00000523275 CCDC183Q5T5S1 534 aa11.89□□□□□ -0.51
CTNNA1-237ENST00000523275 AOPEPQ8N6M6 819 aa11.89□□□□□ -0.51
CTNNA1-237ENST00000523275 IFI44Q8TCB0 444 aa11.89□□□□□ -0.51
CTNNA1-237ENST00000523275 MAPK15Q8TD08 544 aa11.89□□□□□ -0.51
CTNNA1-237ENST00000523275 NCAPGQ9BPX3 1015 aa11.89□□□□□ -0.51
CTNNA1-237ENST00000523275 SYT11Q9BT88 431 aa11.89□□□□□ -0.51
CTNNA1-237ENST00000523275 WRAP53Q9BUR4 548 aaKnown RBP11.89□□□□□ -0.51
CTNNA1-237ENST00000523275 MBNL1Q9NR56 388 aaKnown RBP11.89□□□□□ -0.51
CTNNA1-237ENST00000523275 TAS2R14Q9NYV8 317 aa11.89□□□□□ -0.51
CTNNA1-237ENST00000523275 LHX3Q9UBR4 397 aa11.89□□□□□ -0.51
CTNNA1-237ENST00000523275 UBA2Q9UBT2 640 aaPredicted RBP11.89□□□□□ -0.51
CTNNA1-237ENST00000523275 PCDHB1Q9Y5F3 818 aa11.89□□□□□ -0.51
CTNNA1-237ENST00000523275 TDRD6O60522 2096 aaKnown RBP11.89□□□□□ -0.51
CTNNA1-237ENST00000523275 TMCO5BA8MYB1 307 aa11.88□□□□□ -0.51
CTNNA1-237ENST00000523275 EIF3CLB5ME19 914 aaKnown RBP11.88□□□□□ -0.51
CTNNA1-237ENST00000523275 J3KR12 359 aa11.88□□□□□ -0.51
CTNNA1-237ENST00000523275 TEX33O43247 280 aa11.88□□□□□ -0.51
CTNNA1-237ENST00000523275 PRAMEF11O60813 436 aa11.88□□□□□ -0.51
CTNNA1-237ENST00000523275 USP12O75317 370 aa11.88□□□□□ -0.51
CTNNA1-237ENST00000523275 CSO75390 466 aaKnown RBP11.88□□□□□ -0.51
CTNNA1-237ENST00000523275 GCATO75600 419 aa11.88□□□□□ -0.51
CTNNA1-237ENST00000523275 MBD3O95983 291 aa11.88□□□□□ -0.51
CTNNA1-237ENST00000523275 PSMA2P25787 234 aa11.88□□□□□ -0.51
CTNNA1-237ENST00000523275 IGFALSP35858 605 aa11.88□□□□□ -0.51
CTNNA1-237ENST00000523275 EIF4A3P38919 411 aaKnown RBP11.88□□□□□ -0.51
CTNNA1-237ENST00000523275 ADKP55263 362 aaKnown RBP11.88□□□□□ -0.51
CTNNA1-237ENST00000523275 TYRO3Q06418 890 aa11.88□□□□□ -0.51
CTNNA1-237ENST00000523275 C1orf61Q13536 156 aa11.88□□□□□ -0.51
CTNNA1-237ENST00000523275 ACAP1Q15027 740 aa11.88□□□□□ -0.51
CTNNA1-237ENST00000523275 UGP2Q16851 508 aa11.88□□□□□ -0.51
CTNNA1-237ENST00000523275 TBC1D25Q3MII6 688 aa11.88□□□□□ -0.51
CTNNA1-237ENST00000523275 PRRT3Q5FWE3 981 aa11.88□□□□□ -0.51
CTNNA1-237ENST00000523275 FAXCQ5TGI0 409 aa11.88□□□□□ -0.51
CTNNA1-237ENST00000523275 PLEKHA7Q6IQ23 1121 aa11.88□□□□□ -0.51
CTNNA1-237ENST00000523275 EFL1Q7Z2Z2 1120 aaKnown RBP11.88□□□□□ -0.51
CTNNA1-237ENST00000523275 DNAAF5Q86Y56 855 aa11.88□□□□□ -0.51
CTNNA1-237ENST00000523275 PHACTR4Q8IZ21 702 aa11.88□□□□□ -0.51
CTNNA1-237ENST00000523275 RBFAQ8N0V3 343 aa11.88□□□□□ -0.51
CTNNA1-237ENST00000523275 LSMEM2Q8N112 164 aa11.88□□□□□ -0.51
CTNNA1-237ENST00000523275 TP53I13Q8NBR0 393 aaPredicted RBP11.88□□□□□ -0.51
CTNNA1-237ENST00000523275 TPCN2Q8NHX9 752 aa11.88□□□□□ -0.51
CTNNA1-237ENST00000523275 GLMNQ92990 594 aa11.88□□□□□ -0.51
CTNNA1-237ENST00000523275 EXOC2Q96KP1 924 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms