RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 HS1BP3Q53T59 392 aa16.42■□□□□ 0.22
CLN8-206ENST00000523237 AFMIDQ63HM1 303 aa16.42■□□□□ 0.22
CLN8-206ENST00000523237 DHRS13Q6UX07 377 aa16.42■□□□□ 0.22
CLN8-206ENST00000523237 SLC22A18ASQ8N1D0 253 aa16.42■□□□□ 0.22
CLN8-206ENST00000523237 LZTR1Q8N653 840 aa16.42■□□□□ 0.22
CLN8-206ENST00000523237 DENND6BQ8NEG7 585 aa16.42■□□□□ 0.22
CLN8-206ENST00000523237 HCAR2Q8TDS4 363 aa16.42■□□□□ 0.22
CLN8-206ENST00000523237 CXorf40AQ8TE69 158 aa16.42■□□□□ 0.22
CLN8-206ENST00000523237 SP110Q9HB58 689 aa16.42■□□□□ 0.22
CLN8-206ENST00000523237 GPR27Q9NS67 375 aa16.42■□□□□ 0.22
CLN8-206ENST00000523237 CWC15Q9P013 229 aaKnown RBP16.42■□□□□ 0.22
CLN8-206ENST00000523237 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.42■□□□□ 0.22
CLN8-206ENST00000523237 ARID1BQ8NFD5 2236 aaPredicted RBP16.42■□□□□ 0.22
CLN8-206ENST00000523237 LRRK1Q38SD2 2015 aa16.41■□□□□ 0.22
CLN8-206ENST00000523237 SPEGQ15772 3267 aa16.41■□□□□ 0.22
CLN8-206ENST00000523237 A0A087X0T9 212 aa16.41■□□□□ 0.22
CLN8-206ENST00000523237 H3BRJ5 948 aa16.41■□□□□ 0.22
CLN8-206ENST00000523237 DFFAO00273 331 aa16.41■□□□□ 0.22
CLN8-206ENST00000523237 INSIG1O15503 277 aa16.41■□□□□ 0.22
CLN8-206ENST00000523237 PIAS2O75928 621 aa16.41■□□□□ 0.22
CLN8-206ENST00000523237 PIGNO95427 931 aa16.41■□□□□ 0.22
CLN8-206ENST00000523237 FAM228BP0C875 321 aa16.41■□□□□ 0.22
CLN8-206ENST00000523237 CKMT2P17540 419 aa16.41■□□□□ 0.22
CLN8-206ENST00000523237 ACADVLP49748 655 aa16.41■□□□□ 0.22
CLN8-206ENST00000523237 IL10RBQ08334 325 aa16.41■□□□□ 0.22
CLN8-206ENST00000523237 ELP6Q0PNE2 266 aa16.41■□□□□ 0.22
CLN8-206ENST00000523237 DPYSQ14117 519 aa16.41■□□□□ 0.22
CLN8-206ENST00000523237 RFTN1Q14699 578 aaPredicted RBP16.41■□□□□ 0.22
CLN8-206ENST00000523237 DPYSL2Q16555 572 aa16.41■□□□□ 0.22
CLN8-206ENST00000523237 SMTNL2Q2TAL5 461 aa16.41■□□□□ 0.22
CLN8-206ENST00000523237 LRRC73Q5JTD7 316 aa16.41■□□□□ 0.22
CLN8-206ENST00000523237 CFAP58Q5T655 872 aa16.41■□□□□ 0.22
CLN8-206ENST00000523237 ALKBH5Q6P6C2 394 aaKnown RBP16.41■□□□□ 0.22
CLN8-206ENST00000523237 ARHGAP12Q8IWW6 846 aa16.41■□□□□ 0.22
CLN8-206ENST00000523237 NPWQ8N729 165 aa16.41■□□□□ 0.22
CLN8-206ENST00000523237 NIPA2Q8N8Q9 360 aa16.41■□□□□ 0.22
CLN8-206ENST00000523237 TSC1Q92574 1164 aa16.41■□□□□ 0.22
CLN8-206ENST00000523237 ZNF641Q96N77 438 aaPredicted RBP16.41■□□□□ 0.22
CLN8-206ENST00000523237 TUBGCP5Q96RT8 1024 aa16.41■□□□□ 0.22
CLN8-206ENST00000523237 KLF6Q99612 283 aaPredicted RBP16.41■□□□□ 0.22
CLN8-206ENST00000523237 NUP85Q9BW27 656 aa16.41■□□□□ 0.22
CLN8-206ENST00000523237 CINPQ9BW66 212 aaPredicted RBP16.41■□□□□ 0.22
CLN8-206ENST00000523237 C1QTNF7Q9BXJ2 289 aa16.41■□□□□ 0.22
CLN8-206ENST00000523237 SUV39H2Q9H5I1 410 aa16.41■□□□□ 0.22
CLN8-206ENST00000523237 DNAJC28Q9NX36 388 aa16.41■□□□□ 0.22
CLN8-206ENST00000523237 IP6K2Q9UHH9 426 aa16.41■□□□□ 0.22
CLN8-206ENST00000523237 ANAPC7Q9UJX3 599 aa16.41■□□□□ 0.22
CLN8-206ENST00000523237 IGF2RP11717 2491 aa16.4■□□□□ 0.22
CLN8-206ENST00000523237 SPTY2D1-AS1A0A0U1RR47 76 aa16.4■□□□□ 0.22
CLN8-206ENST00000523237 MMP20O60882 483 aa16.4■□□□□ 0.22
CLN8-206ENST00000523237 TM7SF2O76062 418 aa16.4■□□□□ 0.22
CLN8-206ENST00000523237 CYP1A2P05177 515 aa16.4■□□□□ 0.22
CLN8-206ENST00000523237 TIMP2P16035 220 aa16.4■□□□□ 0.22
CLN8-206ENST00000523237 IL1R2P27930 398 aa16.4■□□□□ 0.22
CLN8-206ENST00000523237 CASP14P31944 242 aa16.4■□□□□ 0.22
CLN8-206ENST00000523237 CSNK1DP48730 415 aa16.4■□□□□ 0.22
CLN8-206ENST00000523237 HNRNPKP61978 463 aaKnown RBP eCLIP16.4■□□□□ 0.22
CLN8-206ENST00000523237 ZNF211Q13398 564 aaPredicted RBP16.4■□□□□ 0.22
CLN8-206ENST00000523237 ILKQ13418 452 aa16.4■□□□□ 0.22
CLN8-206ENST00000523237 CCDC122Q5T0U0 273 aa16.4■□□□□ 0.22
CLN8-206ENST00000523237 BRAT1Q6PJG6 821 aa16.4■□□□□ 0.22
CLN8-206ENST00000523237 PARGQ86W56 976 aa16.4■□□□□ 0.22
CLN8-206ENST00000523237 TMPRSS12Q86WS5 348 aa16.4■□□□□ 0.22
CLN8-206ENST00000523237 SLC25A45Q8N413 288 aa16.4■□□□□ 0.22
CLN8-206ENST00000523237 TSEN2Q8NCE0 465 aaKnown RBP16.4■□□□□ 0.22
CLN8-206ENST00000523237 OR4C6Q8NH72 309 aa16.4■□□□□ 0.22
CLN8-206ENST00000523237 TEKT4Q8WW24 435 aa16.4■□□□□ 0.22
CLN8-206ENST00000523237 HSPH1Q92598 858 aa16.4■□□□□ 0.22
CLN8-206ENST00000523237 XPO4Q9C0E2 1151 aaKnown RBP16.4■□□□□ 0.22
CLN8-206ENST00000523237 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.4■□□□□ 0.22
CLN8-206ENST00000523237 UCKL1Q9NWZ5 548 aa16.4■□□□□ 0.22
CLN8-206ENST00000523237 IPO11Q9UI26 975 aaKnown RBP16.4■□□□□ 0.22
CLN8-206ENST00000523237 TSPAN11A1L157 253 aa16.39■□□□□ 0.21
CLN8-206ENST00000523237 NEMP2A6NFY4 417 aa16.39■□□□□ 0.21
CLN8-206ENST00000523237 SRRM3A6NNA2 597 aaPredicted RBP16.39■□□□□ 0.21
CLN8-206ENST00000523237 H3BM21 787 aa16.39■□□□□ 0.21
CLN8-206ENST00000523237 RARAP10276 462 aa16.39■□□□□ 0.21
CLN8-206ENST00000523237 ALPPL2P10696 532 aa16.39■□□□□ 0.21
CLN8-206ENST00000523237 TCF4P15884 667 aa16.39■□□□□ 0.21
CLN8-206ENST00000523237 HNF1BP35680 557 aa16.39■□□□□ 0.21
CLN8-206ENST00000523237 PFN3P60673 137 aa16.39■□□□□ 0.21
CLN8-206ENST00000523237 PDE1CQ14123 709 aaPredicted RBP16.39■□□□□ 0.21
CLN8-206ENST00000523237 FZD2Q14332 565 aa16.39■□□□□ 0.21
CLN8-206ENST00000523237 UGP2Q16851 508 aa16.39■□□□□ 0.21
CLN8-206ENST00000523237 PROX2Q3B8N5 592 aa16.39■□□□□ 0.21
CLN8-206ENST00000523237 TMEM52BQ4KMG9 183 aa16.39■□□□□ 0.21
CLN8-206ENST00000523237 TMCO3Q6UWJ1 677 aa16.39■□□□□ 0.21
CLN8-206ENST00000523237 POLNQ7Z5Q5 900 aa16.39■□□□□ 0.21
CLN8-206ENST00000523237 SRLQ86TD4 932 aa16.39■□□□□ 0.21
CLN8-206ENST00000523237 CENPTQ96BT3 561 aa16.39■□□□□ 0.21
CLN8-206ENST00000523237 WRAP53Q9BUR4 548 aaKnown RBP16.39■□□□□ 0.21
CLN8-206ENST00000523237 CCDC86Q9H6F5 360 aaKnown RBP16.39■□□□□ 0.21
CLN8-206ENST00000523237 ATP13A3Q9H7F0 1226 aa16.39■□□□□ 0.21
CLN8-206ENST00000523237 FAM149AA5PLN7 773 aa16.38■□□□□ 0.21
CLN8-206ENST00000523237 MYO1FO00160 1098 aa16.38■□□□□ 0.21
CLN8-206ENST00000523237 TRIM38O00635 465 aa16.38■□□□□ 0.21
CLN8-206ENST00000523237 TOR1BO14657 336 aa16.38■□□□□ 0.21
CLN8-206ENST00000523237 FFAR2O15552 330 aa16.38■□□□□ 0.21
CLN8-206ENST00000523237 CBFA2T2O43439 604 aa16.38■□□□□ 0.21
CLN8-206ENST00000523237 SIGLEC6O43699 453 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms