RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 HSF1Q00613 529 aa4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 CEBPZQ03701 1054 aaKnown RBP4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 ZNF91Q05481 1191 aa4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 NEXNQ0ZGT2 675 aa4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 CSTF3Q12996 717 aaKnown RBP4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 AIMP2Q13155 320 aaKnown RBP4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 MTA1Q13330 715 aa4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 PLEKHS1Q5SXH7 462 aa4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 JADE1Q6IE81 842 aa4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 TTI2Q6NXR4 508 aa4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 KLHL24Q6TFL4 600 aa4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 IL20RBQ6UXL0 311 aa4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 C16orf52Q8NHV5 167 aa4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 PSPC1Q8WXF1 523 aaKnown RBP4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 PIGKQ92643 395 aa4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 COQ8BQ96D53 544 aa4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 NAF1Q96HR8 494 aaKnown RBP4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 TMEM79Q9BSE2 394 aa4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 HIPK3Q9H422 1215 aa4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 EIF2B3Q9NR50 452 aaKnown RBP4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 MKLN1Q9UL63 735 aa4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 CORO1CQ9ULV4 474 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 TNFSF13BQ9Y275 285 aa4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 SNX8Q9Y5X2 465 aa4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 A0A0U1RQF3 1178 aa4.92□□□□□ -1.62
HMGB1P1-201ENST00000522557 hCG_1807616A0A1W2PRN6 198 aa4.92□□□□□ -1.62
HMGB1P1-201ENST00000522557 FOXO6A8MYZ6 492 aa4.92□□□□□ -1.62
HMGB1P1-201ENST00000522557 FAM157AC9JC47 383 aa4.92□□□□□ -1.62
HMGB1P1-201ENST00000522557 ZNF500O60304 480 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P1-201ENST00000522557 CNOT3O75175 753 aaKnown RBP4.92□□□□□ -1.62
HMGB1P1-201ENST00000522557 CYP19A1P11511 503 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P1-201ENST00000522557 UNGP13051 313 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P1-201ENST00000522557 PTPN2P17706 415 aa4.92□□□□□ -1.62
HMGB1P1-201ENST00000522557 CTPS1P17812 591 aa4.92□□□□□ -1.62
HMGB1P1-201ENST00000522557 CDAP32320 146 aa4.92□□□□□ -1.62
HMGB1P1-201ENST00000522557 GABRB2P47870 512 aa4.92□□□□□ -1.62
HMGB1P1-201ENST00000522557 IRX6P78412 446 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P1-201ENST00000522557 SHBQ15464 509 aa4.92□□□□□ -1.62
HMGB1P1-201ENST00000522557 MED22Q15528 200 aa4.92□□□□□ -1.62
HMGB1P1-201ENST00000522557 GSTA3Q16772 222 aa4.92□□□□□ -1.62
HMGB1P1-201ENST00000522557 SHC4Q6S5L8 630 aa4.92□□□□□ -1.62
HMGB1P1-201ENST00000522557 KDELC2Q7Z4H8 507 aa4.92□□□□□ -1.62
HMGB1P1-201ENST00000522557 KRT77Q7Z794 578 aa4.92□□□□□ -1.62
HMGB1P1-201ENST00000522557 ADGRF2Q8IZF7 708 aa4.92□□□□□ -1.62
HMGB1P1-201ENST00000522557 CADM3Q8N126 398 aa4.92□□□□□ -1.62
HMGB1P1-201ENST00000522557 GHDCQ8N2G8 530 aa4.92□□□□□ -1.62
HMGB1P1-201ENST00000522557 C1orf131Q8NDD1 294 aaKnown RBP4.92□□□□□ -1.62
HMGB1P1-201ENST00000522557 GDPD5Q8WTR4 605 aa4.92□□□□□ -1.62
HMGB1P1-201ENST00000522557 SCFD2Q8WU76 684 aa4.92□□□□□ -1.62
HMGB1P1-201ENST00000522557 ACTR5Q9H9F9 607 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P1-201ENST00000522557 WSB2Q9NYS7 404 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P1-201ENST00000522557 KLK8O60259 260 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 ERAL1O75616 437 aaKnown RBP4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 BMP15O95972 392 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 FGBP02675 491 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 SPARCP09486 303 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 PRF1P14222 555 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 ITGAXP20702 1163 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 CHRNA5P30532 468 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 PIP4K2AP48426 406 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 CXCR3P49682 368 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 CTCFP49711 727 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 CYP2J2P51589 502 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 SLC12A2P55011 1212 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 IFI35P80217 286 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 NIPAL4Q0D2K0 466 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 FGFBP1Q14512 234 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 WTAPQ15007 396 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 RBMS2Q15434 407 aaKnown RBP4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 TAF11Q15544 211 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 ASTE1Q2TB18 679 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 CXorf66Q5JRM2 361 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 C10orf25Q5T742 122 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 SARM1Q6SZW1 724 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 LRIG3Q6UXM1 1119 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 DEF8Q6ZN54 512 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 DDIASQ8IXT1 998 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 PDILTQ8N807 584 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 FRMD1Q8N878 549 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 NKAIN3Q8N8D7 197 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 NRACQ8N912 160 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 KDM1BQ8NB78 822 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 MCPH1Q8NEM0 835 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 NOC3LQ8WTT2 800 aaKnown RBP4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 KAT2BQ92831 832 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 PABPC5Q96DU9 382 aaKnown RBP4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 MMABQ96EY8 250 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 PPP1R13BQ96KQ4 1090 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 PDZD7Q9H5P4 517 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 FBRSL1Q9HCM7 1045 aaKnown RBP4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 WDR6Q9NNW5 1121 aaKnown RBP4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 EHD2Q9NZN4 543 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 DHDHQ9UQ10 334 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 RAI2Q9Y5P3 530 aa4.91□□□□□ -1.62
HMGB1P1-201ENST00000522557 TRBV5-3A0A0A0MS03 114 aa4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 KIR2DS5A0A0G2JLQ3 304 aa4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 FAM237BA0A1B0GVD1 139 aa4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 PTGES3LE9PB15 166 aa4.9□□□□□ -1.63
HMGB1P1-201ENST00000522557 KIR2DS3K7RE56 304 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms