RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 IPMKQ8NFU5 416 aa13.21□□□□□ -0.29
CPNE3-205ENST00000522240 FRS2Q8WU20 508 aa13.21□□□□□ -0.29
CPNE3-205ENST00000522240 EXOC2Q96KP1 924 aa13.21□□□□□ -0.29
CPNE3-205ENST00000522240 RPL10LQ96L21 214 aaKnown RBP13.21□□□□□ -0.29
CPNE3-205ENST00000522240 MRGPRX2Q96LB1 330 aa13.21□□□□□ -0.29
CPNE3-205ENST00000522240 TUBGCP5Q96RT8 1024 aa13.21□□□□□ -0.29
CPNE3-205ENST00000522240 P2RY13Q9BPV8 354 aa13.21□□□□□ -0.29
CPNE3-205ENST00000522240 FICDQ9BVA6 458 aa13.21□□□□□ -0.29
CPNE3-205ENST00000522240 TM6SF2Q9BZW4 377 aa13.21□□□□□ -0.29
CPNE3-205ENST00000522240 NOD2Q9HC29 1040 aa13.21□□□□□ -0.29
CPNE3-205ENST00000522240 UBP1Q9NZI7 540 aa13.21□□□□□ -0.29
CPNE3-205ENST00000522240 PIAS3Q9Y6X2 628 aa13.21□□□□□ -0.29
CPNE3-205ENST00000522240 TBC1D3BA6NDS4 549 aa13.2□□□□□ -0.3
CPNE3-205ENST00000522240 WASH3PC4AMC7 463 aa13.2□□□□□ -0.3
CPNE3-205ENST00000522240 PMPCBO75439 489 aa13.2□□□□□ -0.3
CPNE3-205ENST00000522240 ZNF821O75541 412 aaPredicted RBP13.2□□□□□ -0.3
CPNE3-205ENST00000522240 ASGR2P07307 311 aa13.2□□□□□ -0.3
CPNE3-205ENST00000522240 HLA-DPA1P20036 260 aa13.2□□□□□ -0.3
CPNE3-205ENST00000522240 TNFRSF4P43489 277 aa13.2□□□□□ -0.3
CPNE3-205ENST00000522240 TNNT3P45378 269 aaPredicted RBP13.2□□□□□ -0.3
CPNE3-205ENST00000522240 SOX9P48436 509 aa13.2□□□□□ -0.3
CPNE3-205ENST00000522240 ZP2Q05996 745 aa13.2□□□□□ -0.3
CPNE3-205ENST00000522240 DLG2Q15700 870 aa13.2□□□□□ -0.3
CPNE3-205ENST00000522240 SYCP2LQ5T4T6 812 aa13.2□□□□□ -0.3
CPNE3-205ENST00000522240 NAIF1Q69YI7 327 aaPredicted RBP13.2□□□□□ -0.3
CPNE3-205ENST00000522240 CCDC25Q86WR0 208 aa13.2□□□□□ -0.3
CPNE3-205ENST00000522240 CYB5D2Q8WUJ1 264 aa13.2□□□□□ -0.3
CPNE3-205ENST00000522240 TTC25Q96NG3 672 aa13.2□□□□□ -0.3
CPNE3-205ENST00000522240 TMUB1Q9BVT8 246 aa13.2□□□□□ -0.3
CPNE3-205ENST00000522240 TDRD1Q9BXT4 1180 aaKnown RBP13.2□□□□□ -0.3
CPNE3-205ENST00000522240 ARNT2Q9HBZ2 717 aa13.2□□□□□ -0.3
CPNE3-205ENST00000522240 DUSP12Q9UNI6 340 aa13.2□□□□□ -0.3
CPNE3-205ENST00000522240 PLA2G4CQ9UP65 541 aa13.2□□□□□ -0.3
CPNE3-205ENST00000522240 STARD13Q9Y3M8 1113 aa13.2□□□□□ -0.3
CPNE3-205ENST00000522240 LOC285095A0A1B0GVY8 99 aa13.19□□□□□ -0.3
CPNE3-205ENST00000522240 GJB3O75712 270 aa13.19□□□□□ -0.3
CPNE3-205ENST00000522240 FGF1P05230 155 aa13.19□□□□□ -0.3
CPNE3-205ENST00000522240 NUDT7P0C024 238 aa13.19□□□□□ -0.3
CPNE3-205ENST00000522240 HNRNPLP14866 589 aaKnown RBP eCLIP13.19□□□□□ -0.3
CPNE3-205ENST00000522240 TSHRP16473 764 aa13.19□□□□□ -0.3
CPNE3-205ENST00000522240 RECQLP46063 649 aaPredicted RBP13.19□□□□□ -0.3
CPNE3-205ENST00000522240 CCNHP51946 323 aaPredicted RBP13.19□□□□□ -0.3
CPNE3-205ENST00000522240 RAD51Q06609 339 aa13.19□□□□□ -0.3
CPNE3-205ENST00000522240 CDK18Q07002 472 aa13.19□□□□□ -0.3
CPNE3-205ENST00000522240 DHX9Q08211 1270 aaKnown RBP13.19□□□□□ -0.3
CPNE3-205ENST00000522240 PDIA2Q13087 525 aaKnown RBP13.19□□□□□ -0.3
CPNE3-205ENST00000522240 IHHQ14623 411 aa13.19□□□□□ -0.3
CPNE3-205ENST00000522240 BBS9Q3SYG4 887 aa13.19□□□□□ -0.3
CPNE3-205ENST00000522240 FNDC3BQ53EP0 1204 aaKnown RBP13.19□□□□□ -0.3
CPNE3-205ENST00000522240 CARD16Q5EG05 197 aa13.19□□□□□ -0.3
CPNE3-205ENST00000522240 ARSIQ5FYB1 569 aa13.19□□□□□ -0.3
CPNE3-205ENST00000522240 DGKKQ5KSL6 1271 aa13.19□□□□□ -0.3
CPNE3-205ENST00000522240 FNBP1LQ5T0N5 605 aa13.19□□□□□ -0.3
CPNE3-205ENST00000522240 ATXN7L2Q5T6C5 722 aaPredicted RBP13.19□□□□□ -0.3
CPNE3-205ENST00000522240 RANBP10Q6VN20 620 aa13.19□□□□□ -0.3
CPNE3-205ENST00000522240 Q6ZVU0 165 aa13.19□□□□□ -0.3
CPNE3-205ENST00000522240 TRMT10CQ7L0Y3 403 aaKnown RBP13.19□□□□□ -0.3
CPNE3-205ENST00000522240 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.19□□□□□ -0.3
CPNE3-205ENST00000522240 OR52K1Q8NGK4 314 aa13.19□□□□□ -0.3
CPNE3-205ENST00000522240 SORCS1Q8WY21 1168 aa13.19□□□□□ -0.3
CPNE3-205ENST00000522240 IFT43Q96FT9 208 aa13.19□□□□□ -0.3
CPNE3-205ENST00000522240 PWWP2AQ96N64 755 aa13.19□□□□□ -0.3
CPNE3-205ENST00000522240 TRIB3Q96RU7 358 aa13.19□□□□□ -0.3
CPNE3-205ENST00000522240 CPEB1Q9BZB8 566 aaKnown RBP13.19□□□□□ -0.3
CPNE3-205ENST00000522240 ZMYND15Q9H091 742 aa13.19□□□□□ -0.3
CPNE3-205ENST00000522240 TNKS2Q9H2K2 1166 aa13.19□□□□□ -0.3
CPNE3-205ENST00000522240 ATP13A3Q9H7F0 1226 aa13.19□□□□□ -0.3
CPNE3-205ENST00000522240 SAYSD1Q9NPB0 183 aa13.19□□□□□ -0.3
CPNE3-205ENST00000522240 HEBP1Q9NRV9 189 aa13.19□□□□□ -0.3
CPNE3-205ENST00000522240 THAP10Q9P2Z0 257 aaPredicted RBP13.19□□□□□ -0.3
CPNE3-205ENST00000522240 SLCO3A1Q9UIG8 710 aa13.19□□□□□ -0.3
CPNE3-205ENST00000522240 ANKRD36A6QL64 1941 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 EDDM13A0A1B0GTR0 161 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 A0A1W2PQ67 120 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 ALOX15BO15296 676 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 HTRA2O43464 458 aaPredicted RBP13.18□□□□□ -0.3
CPNE3-205ENST00000522240 NARSO43776 548 aaKnown RBP13.18□□□□□ -0.3
CPNE3-205ENST00000522240 USP12O75317 370 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 NDST3O95803 873 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 ATXN1LP0C7T5 689 aaKnown RBP13.18□□□□□ -0.3
CPNE3-205ENST00000522240 DRD1P21728 446 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 SERPINA4P29622 427 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 GRIA1P42261 906 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 MAGEA4P43358 317 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 NPY2RP49146 381 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 GALK1P51570 392 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 PMS2P54278 862 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 RPL26P61254 145 aaKnown RBP13.18□□□□□ -0.3
CPNE3-205ENST00000522240 BCL2L1Q07817 233 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 TRAF2Q12933 501 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 ENPP2Q13822 863 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 SPARCL1Q14515 664 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 ZNF234Q14588 700 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 SLC1A5Q15758 541 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 PCSK7Q16549 785 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 HNRNPA1L2Q32P51 320 aaKnown RBP13.18□□□□□ -0.3
CPNE3-205ENST00000522240 ACCSLQ4AC99 568 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 MSS51Q4VC12 460 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 CCDC38Q502W7 563 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 TMEM196Q5HYL7 178 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms