RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 THOP1P52888 689 aa18.68■□□□□ 0.58
TOP1MT-216ENST00000522121 ELP6Q0PNE2 266 aa18.68■□□□□ 0.58
TOP1MT-216ENST00000522121 CYTH1Q15438 398 aa18.68■□□□□ 0.58
TOP1MT-216ENST00000522121 LRRC73Q5JTD7 316 aa18.68■□□□□ 0.58
TOP1MT-216ENST00000522121 CFAP58Q5T655 872 aa18.68■□□□□ 0.58
TOP1MT-216ENST00000522121 ZNF571Q7Z3V5 609 aaPredicted RBP18.68■□□□□ 0.58
TOP1MT-216ENST00000522121 HCAR2Q8TDS4 363 aa18.68■□□□□ 0.58
TOP1MT-216ENST00000522121 FNIP1Q8TF40 1166 aa18.68■□□□□ 0.58
TOP1MT-216ENST00000522121 BTN2A2Q8WVV5 523 aa18.68■□□□□ 0.58
TOP1MT-216ENST00000522121 TRIM11Q96F44 468 aa18.68■□□□□ 0.58
TOP1MT-216ENST00000522121 EXOC2Q96KP1 924 aa18.68■□□□□ 0.58
TOP1MT-216ENST00000522121 EDEM3Q9BZQ6 932 aa18.68■□□□□ 0.58
TOP1MT-216ENST00000522121 NRSN2Q9GZP1 204 aa18.68■□□□□ 0.58
TOP1MT-216ENST00000522121 LRRC19Q9H756 370 aa18.68■□□□□ 0.58
TOP1MT-216ENST00000522121 SCUBE2Q9NQ36 999 aa18.68■□□□□ 0.58
TOP1MT-216ENST00000522121 LHX3Q9UBR4 397 aa18.68■□□□□ 0.58
TOP1MT-216ENST00000522121 CNOT8Q9UFF9 292 aaKnown RBP18.68■□□□□ 0.58
TOP1MT-216ENST00000522121 CSNK1G3Q9Y6M4 447 aa18.68■□□□□ 0.58
TOP1MT-216ENST00000522121 DOCK9Q9BZ29 2069 aa18.68■□□□□ 0.58
TOP1MT-216ENST00000522121 PKD1L2Q7Z442 2459 aa18.68■□□□□ 0.58
TOP1MT-216ENST00000522121 CHD5Q8TDI0 1954 aa18.68■□□□□ 0.58
TOP1MT-216ENST00000522121 K7ESM1 405 aa18.67■□□□□ 0.58
TOP1MT-216ENST00000522121 TOR1BO14657 336 aa18.67■□□□□ 0.58
TOP1MT-216ENST00000522121 PRAMEF11O60813 436 aa18.67■□□□□ 0.58
TOP1MT-216ENST00000522121 MMP20O60882 483 aa18.67■□□□□ 0.58
TOP1MT-216ENST00000522121 GIMD1P0DJR0 217 aa18.67■□□□□ 0.58
TOP1MT-216ENST00000522121 TIMP2P16035 220 aa18.67■□□□□ 0.58
TOP1MT-216ENST00000522121 JUNDP17535 347 aa18.67■□□□□ 0.58
TOP1MT-216ENST00000522121 PFN3P60673 137 aa18.67■□□□□ 0.58
TOP1MT-216ENST00000522121 TPM4P67936 248 aa18.67■□□□□ 0.58
TOP1MT-216ENST00000522121 INSM1Q01101 510 aaPredicted RBP18.67■□□□□ 0.58
TOP1MT-216ENST00000522121 RFX8Q6ZV50 586 aa18.67■□□□□ 0.58
TOP1MT-216ENST00000522121 VPS36Q86VN1 386 aa18.67■□□□□ 0.58
TOP1MT-216ENST00000522121 PSTKQ8IV42 348 aaKnown RBP18.67■□□□□ 0.58
TOP1MT-216ENST00000522121 FAM181AQ8N9Y4 354 aa18.67■□□□□ 0.58
TOP1MT-216ENST00000522121 ZNF548Q8NEK5 533 aaPredicted RBP18.67■□□□□ 0.58
TOP1MT-216ENST00000522121 HNRNPLLQ8WVV9 542 aaKnown RBP18.67■□□□□ 0.58
TOP1MT-216ENST00000522121 CENPTQ96BT3 561 aa18.67■□□□□ 0.58
TOP1MT-216ENST00000522121 ZNF653Q96CK0 615 aa18.67■□□□□ 0.58
TOP1MT-216ENST00000522121 CELF6Q96J87 481 aaKnown RBP18.67■□□□□ 0.58
TOP1MT-216ENST00000522121 APOLD1Q96LR9 279 aa18.67■□□□□ 0.58
TOP1MT-216ENST00000522121 NAP1L5Q96NT1 182 aaPredicted RBP18.67■□□□□ 0.58
TOP1MT-216ENST00000522121 SNRNP25Q9BV90 132 aaKnown RBP18.67■□□□□ 0.58
TOP1MT-216ENST00000522121 MRPL47Q9HD33 250 aaKnown RBP18.67■□□□□ 0.58
TOP1MT-216ENST00000522121 NCKIPSDQ9NZQ3 722 aa18.67■□□□□ 0.58
TOP1MT-216ENST00000522121 TRPM6Q9BX84 2022 aa18.66■□□□□ 0.58
TOP1MT-216ENST00000522121 J3KR12 359 aa18.66■□□□□ 0.58
TOP1MT-216ENST00000522121 RIOK3O14730 519 aaKnown RBP18.66■□□□□ 0.58
TOP1MT-216ENST00000522121 INSIG1O15503 277 aa18.66■□□□□ 0.58
TOP1MT-216ENST00000522121 AQP9O43315 295 aa18.66■□□□□ 0.58
TOP1MT-216ENST00000522121 NEBLO76041 1014 aa18.66■□□□□ 0.58
TOP1MT-216ENST00000522121 PIGNO95427 931 aa18.66■□□□□ 0.58
TOP1MT-216ENST00000522121 MYBL1P10243 752 aa18.66■□□□□ 0.58
TOP1MT-216ENST00000522121 PAPOLAP51003 745 aaKnown RBP18.66■□□□□ 0.58
TOP1MT-216ENST00000522121 ZNF135P52742 658 aaPredicted RBP18.66■□□□□ 0.58
TOP1MT-216ENST00000522121 YPEL5P62699 121 aa18.66■□□□□ 0.58
TOP1MT-216ENST00000522121 CA9Q16790 459 aa18.66■□□□□ 0.58
TOP1MT-216ENST00000522121 COL28A1Q2UY09 1125 aa18.66■□□□□ 0.58
TOP1MT-216ENST00000522121 PPP6R3Q5H9R7 873 aaPredicted RBP18.66■□□□□ 0.58
TOP1MT-216ENST00000522121 ZCCHC8Q6NZY4 707 aaKnown RBP18.66■□□□□ 0.58
TOP1MT-216ENST00000522121 DCBLD1Q8N8Z6 715 aa18.66■□□□□ 0.58
TOP1MT-216ENST00000522121 ZNF641Q96N77 438 aaPredicted RBP18.66■□□□□ 0.58
TOP1MT-216ENST00000522121 TUBGCP5Q96RT8 1024 aa18.66■□□□□ 0.58
TOP1MT-216ENST00000522121 WRAP53Q9BUR4 548 aaKnown RBP18.66■□□□□ 0.58
TOP1MT-216ENST00000522121 SLC39A8Q9C0K1 460 aa18.66■□□□□ 0.58
TOP1MT-216ENST00000522121 ABCG4Q9H172 646 aa18.66■□□□□ 0.58
TOP1MT-216ENST00000522121 SUV39H2Q9H5I1 410 aa18.66■□□□□ 0.58
TOP1MT-216ENST00000522121 PDFQ9HBH1 243 aa18.66■□□□□ 0.58
TOP1MT-216ENST00000522121 FAM208BQ5VWN6 2430 aa18.66■□□□□ 0.58
TOP1MT-216ENST00000522121 ANKRD11Q6UB99 2663 aaPredicted RBP18.66■□□□□ 0.58
TOP1MT-216ENST00000522121 DDX3XO00571 662 aaKnown RBP eCLIP18.65■□□□□ 0.58
TOP1MT-216ENST00000522121 PALMO75781 387 aa18.65■□□□□ 0.58
TOP1MT-216ENST00000522121 MT-CO3P00414 261 aa18.65■□□□□ 0.58
TOP1MT-216ENST00000522121 GP1BAP07359 652 aa18.65■□□□□ 0.58
TOP1MT-216ENST00000522121 MIPP30301 263 aa18.65■□□□□ 0.58
TOP1MT-216ENST00000522121 IGFALSP35858 605 aa18.65■□□□□ 0.58
TOP1MT-216ENST00000522121 SEMG2Q02383 582 aa18.65■□□□□ 0.58
TOP1MT-216ENST00000522121 RTP5Q14D33 572 aa18.65■□□□□ 0.58
TOP1MT-216ENST00000522121 UGP2Q16851 508 aa18.65■□□□□ 0.58
TOP1MT-216ENST00000522121 KLHL40Q2TBA0 621 aa18.65■□□□□ 0.58
TOP1MT-216ENST00000522121 TMEM52BQ4KMG9 183 aa18.65■□□□□ 0.58
TOP1MT-216ENST00000522121 ERAP2Q6P179 960 aa18.65■□□□□ 0.58
TOP1MT-216ENST00000522121 BRAT1Q6PJG6 821 aa18.65■□□□□ 0.58
TOP1MT-216ENST00000522121 ARFGAP1Q8N6T3 406 aa18.65■□□□□ 0.58
TOP1MT-216ENST00000522121 LMX1AQ8TE12 382 aa18.65■□□□□ 0.58
TOP1MT-216ENST00000522121 PEBP4Q96S96 227 aa18.65■□□□□ 0.58
TOP1MT-216ENST00000522121 KCTD15Q96SI1 283 aaPredicted RBP18.65■□□□□ 0.58
TOP1MT-216ENST00000522121 IL12RB2Q99665 862 aa18.65■□□□□ 0.58
TOP1MT-216ENST00000522121 CAAP1Q9H8G2 361 aa18.65■□□□□ 0.58
TOP1MT-216ENST00000522121 SP110Q9HB58 689 aa18.65■□□□□ 0.58
TOP1MT-216ENST00000522121 MYO1AQ9UBC5 1043 aa18.65■□□□□ 0.58
TOP1MT-216ENST00000522121 SPASTQ9UBP0 616 aa18.65■□□□□ 0.58
TOP1MT-216ENST00000522121 DSPP15924 2871 aaKnown RBP18.64■□□□□ 0.58
TOP1MT-216ENST00000522121 GOLGA4Q13439 2230 aaKnown RBP18.64■□□□□ 0.57
TOP1MT-216ENST00000522121 A0A087WV48 116 aa18.64■□□□□ 0.57
TOP1MT-216ENST00000522121 TSPAN11A1L157 253 aa18.64■□□□□ 0.57
TOP1MT-216ENST00000522121 DFFAO00273 331 aa18.64■□□□□ 0.57
TOP1MT-216ENST00000522121 OPA1O60313 960 aa18.64■□□□□ 0.57
TOP1MT-216ENST00000522121 SKILP12757 684 aa18.64■□□□□ 0.57
TOP1MT-216ENST00000522121 ERCC2P18074 760 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms