RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 CDH6P55285 790 aa18.09■□□□□ 0.49
TRAPPC9-211ENST00000521700 CLDN2P57739 230 aa18.09■□□□□ 0.49
TRAPPC9-211ENST00000521700 KRT81Q14533 505 aa18.09■□□□□ 0.49
TRAPPC9-211ENST00000521700 RFTN1Q14699 578 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC9-211ENST00000521700 LRRC73Q5JTD7 316 aa18.09■□□□□ 0.49
TRAPPC9-211ENST00000521700 GCNT7Q6ZNI0 430 aa18.09■□□□□ 0.49
TRAPPC9-211ENST00000521700 SRLQ86TD4 932 aa18.09■□□□□ 0.49
TRAPPC9-211ENST00000521700 CNGA4Q8IV77 575 aa18.09■□□□□ 0.49
TRAPPC9-211ENST00000521700 SAP25Q8TEE9 199 aa18.09■□□□□ 0.49
TRAPPC9-211ENST00000521700 BMFQ96LC9 184 aa18.09■□□□□ 0.49
TRAPPC9-211ENST00000521700 SUV39H2Q9H5I1 410 aa18.09■□□□□ 0.49
TRAPPC9-211ENST00000521700 HS3ST3A1Q9Y663 406 aa18.09■□□□□ 0.49
TRAPPC9-211ENST00000521700 TPRP12270 2363 aaKnown RBP18.08■□□□□ 0.48
TRAPPC9-211ENST00000521700 ARRB1P49407 418 aaPredicted RBP18.08■□□□□ 0.48
TRAPPC9-211ENST00000521700 TAS2R40P59535 323 aa18.08■□□□□ 0.48
TRAPPC9-211ENST00000521700 BNIP3Q12983 259 aa18.08■□□□□ 0.48
TRAPPC9-211ENST00000521700 MMRN1Q13201 1228 aa18.08■□□□□ 0.48
TRAPPC9-211ENST00000521700 GRM3Q14832 879 aa18.08■□□□□ 0.48
TRAPPC9-211ENST00000521700 ABI3BPQ7Z7G0 1075 aa18.08■□□□□ 0.48
TRAPPC9-211ENST00000521700 SLCO6A1Q86UG4 719 aa18.08■□□□□ 0.48
TRAPPC9-211ENST00000521700 ZSCAN30Q86W11 494 aa18.08■□□□□ 0.48
TRAPPC9-211ENST00000521700 CAMK1DQ8IU85 385 aa18.08■□□□□ 0.48
TRAPPC9-211ENST00000521700 OXR1Q8N573 874 aa18.08■□□□□ 0.48
TRAPPC9-211ENST00000521700 PNPLA1Q8N8W4 532 aa18.08■□□□□ 0.48
TRAPPC9-211ENST00000521700 OR13H1Q8NG92 308 aa18.08■□□□□ 0.48
TRAPPC9-211ENST00000521700 HCAR2Q8TDS4 363 aa18.08■□□□□ 0.48
TRAPPC9-211ENST00000521700 KLF6Q99612 283 aaPredicted RBP18.08■□□□□ 0.48
TRAPPC9-211ENST00000521700 CDC6Q99741 560 aa18.08■□□□□ 0.48
TRAPPC9-211ENST00000521700 CINPQ9BW66 212 aaPredicted RBP18.08■□□□□ 0.48
TRAPPC9-211ENST00000521700 RCOR3Q9P2K3 495 aaPredicted RBP18.08■□□□□ 0.48
TRAPPC9-211ENST00000521700 TSPAN11A1L157 253 aa18.07■□□□□ 0.48
TRAPPC9-211ENST00000521700 POM121BA6NF01 834 aa18.07■□□□□ 0.48
TRAPPC9-211ENST00000521700 MUSKO15146 869 aa18.07■□□□□ 0.48
TRAPPC9-211ENST00000521700 YKT6O15498 198 aa18.07■□□□□ 0.48
TRAPPC9-211ENST00000521700 HYAL3O43820 417 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC9-211ENST00000521700 PEX11BO96011 259 aa18.07■□□□□ 0.48
TRAPPC9-211ENST00000521700 ITGAVP06756 1048 aa18.07■□□□□ 0.48
TRAPPC9-211ENST00000521700 FTH1P19P0C7X4 201 aa18.07■□□□□ 0.48
TRAPPC9-211ENST00000521700 EPHA8P29322 1005 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC9-211ENST00000521700 NSUN2Q08J23 767 aaKnown RBP eCLIP18.07■□□□□ 0.48
TRAPPC9-211ENST00000521700 SLC10A7Q0GE19 358 aa18.07■□□□□ 0.48
TRAPPC9-211ENST00000521700 SGCGQ13326 291 aa18.07■□□□□ 0.48
TRAPPC9-211ENST00000521700 DPYSL3Q14195 570 aa18.07■□□□□ 0.48
TRAPPC9-211ENST00000521700 LBRQ14739 615 aaKnown RBP18.07■□□□□ 0.48
TRAPPC9-211ENST00000521700 CHCHD4Q8N4Q1 142 aa18.07■□□□□ 0.48
TRAPPC9-211ENST00000521700 SLC35G2Q8TBE7 412 aa18.07■□□□□ 0.48
TRAPPC9-211ENST00000521700 ASB12Q8WXK4 309 aa18.07■□□□□ 0.48
TRAPPC9-211ENST00000521700 NSMCE3Q96MG7 304 aa18.07■□□□□ 0.48
TRAPPC9-211ENST00000521700 ZNF641Q96N77 438 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC9-211ENST00000521700 ZNF599Q96NL3 588 aa18.07■□□□□ 0.48
TRAPPC9-211ENST00000521700 LENG8Q96PV6 779 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC9-211ENST00000521700 PSKH2Q96QS6 385 aa18.07■□□□□ 0.48
TRAPPC9-211ENST00000521700 SCNM1Q9BWG6 230 aa18.07■□□□□ 0.48
TRAPPC9-211ENST00000521700 RBSNQ9H1K0 784 aa18.07■□□□□ 0.48
TRAPPC9-211ENST00000521700 TMEM110-MUSTN1A8MSY1 372 aa18.06■□□□□ 0.48
TRAPPC9-211ENST00000521700 MAFKO60675 156 aa18.06■□□□□ 0.48
TRAPPC9-211ENST00000521700 MMP20O60882 483 aa18.06■□□□□ 0.48
TRAPPC9-211ENST00000521700 TRIM16O95361 564 aa18.06■□□□□ 0.48
TRAPPC9-211ENST00000521700 ATXN1LP0C7T5 689 aaKnown RBP18.06■□□□□ 0.48
TRAPPC9-211ENST00000521700 MAN1A1P33908 653 aa18.06■□□□□ 0.48
TRAPPC9-211ENST00000521700 GJC1P36383 396 aa18.06■□□□□ 0.48
TRAPPC9-211ENST00000521700 SUOXP51687 545 aa18.06■□□□□ 0.48
TRAPPC9-211ENST00000521700 MESDQ14696 234 aa18.06■□□□□ 0.48
TRAPPC9-211ENST00000521700 UGP2Q16851 508 aa18.06■□□□□ 0.48
TRAPPC9-211ENST00000521700 TMCO4Q5TGY1 634 aa18.06■□□□□ 0.48
TRAPPC9-211ENST00000521700 Q6ZSR6 202 aa18.06■□□□□ 0.48
TRAPPC9-211ENST00000521700 KANSL1Q7Z3B3 1105 aa18.06■□□□□ 0.48
TRAPPC9-211ENST00000521700 ZSWIM9Q86XI8 627 aa18.06■□□□□ 0.48
TRAPPC9-211ENST00000521700 SLC22A18ASQ8N1D0 253 aa18.06■□□□□ 0.48
TRAPPC9-211ENST00000521700 TC2NQ8N9U0 490 aa18.06■□□□□ 0.48
TRAPPC9-211ENST00000521700 KCTD6Q8NC69 237 aa18.06■□□□□ 0.48
TRAPPC9-211ENST00000521700 PCDH19Q8TAB3 1148 aa18.06■□□□□ 0.48
TRAPPC9-211ENST00000521700 FAM174AQ8TBP5 190 aa18.06■□□□□ 0.48
TRAPPC9-211ENST00000521700 TUBGCP5Q96RT8 1024 aa18.06■□□□□ 0.48
TRAPPC9-211ENST00000521700 CALN1Q9BXU9 219 aa18.06■□□□□ 0.48
TRAPPC9-211ENST00000521700 KLHL11Q9NVR0 708 aa18.06■□□□□ 0.48
TRAPPC9-211ENST00000521700 TOR4AQ9NXH8 423 aa18.06■□□□□ 0.48
TRAPPC9-211ENST00000521700 SEPT3Q9UH03 358 aa18.06■□□□□ 0.48
TRAPPC9-211ENST00000521700 LCMT1Q9UIC8 334 aa18.06■□□□□ 0.48
TRAPPC9-211ENST00000521700 ACACBO00763 2458 aa18.05■□□□□ 0.48
TRAPPC9-211ENST00000521700 A6NNZ2 444 aa18.05■□□□□ 0.48
TRAPPC9-211ENST00000521700 XPAP23025 273 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC9-211ENST00000521700 SERPINB6P35237 376 aa18.05■□□□□ 0.48
TRAPPC9-211ENST00000521700 SCNN1BP51168 640 aa18.05■□□□□ 0.48
TRAPPC9-211ENST00000521700 RENBPP51606 427 aa18.05■□□□□ 0.48
TRAPPC9-211ENST00000521700 INAVAQ3KP66 663 aa18.05■□□□□ 0.48
TRAPPC9-211ENST00000521700 TMEM52BQ4KMG9 183 aa18.05■□□□□ 0.48
TRAPPC9-211ENST00000521700 KYAT3Q6YP21 454 aaKnown RBP18.05■□□□□ 0.48
TRAPPC9-211ENST00000521700 RAB44Q7Z6P3 723 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC9-211ENST00000521700 CXorf40AQ8TE69 158 aa18.05■□□□□ 0.48
TRAPPC9-211ENST00000521700 ADAMTS14Q8WXS8 1223 aa18.05■□□□□ 0.48
TRAPPC9-211ENST00000521700 CENPTQ96BT3 561 aa18.05■□□□□ 0.48
TRAPPC9-211ENST00000521700 WRAP53Q9BUR4 548 aaKnown RBP18.05■□□□□ 0.48
TRAPPC9-211ENST00000521700 ATP13A3Q9H7F0 1226 aa18.05■□□□□ 0.48
TRAPPC9-211ENST00000521700 PCDH12Q9NPG4 1184 aa18.05■□□□□ 0.48
TRAPPC9-211ENST00000521700 GPR27Q9NS67 375 aa18.05■□□□□ 0.48
TRAPPC9-211ENST00000521700 APOBEC2Q9Y235 224 aaKnown RBP18.05■□□□□ 0.48
TRAPPC9-211ENST00000521700 ANKRD36A6QL64 1941 aa18.05■□□□□ 0.48
TRAPPC9-211ENST00000521700 TTC24A2A3L6 582 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC9-211ENST00000521700 RIOK3O14730 519 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms