RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 CAMK1DQ8IU85 385 aa20.88■□□□□ 0.93
TRIM35-203ENST00000521253 SPC24Q8NBT2 197 aa20.88■□□□□ 0.93
TRIM35-203ENST00000521253 TMEM145Q8NBT3 493 aa20.88■□□□□ 0.93
TRIM35-203ENST00000521253 DEFB124Q8NES8 71 aa20.88■□□□□ 0.93
TRIM35-203ENST00000521253 TUBGCP5Q96RT8 1024 aa20.88■□□□□ 0.93
TRIM35-203ENST00000521253 MYOCQ99972 504 aa20.88■□□□□ 0.93
TRIM35-203ENST00000521253 FZD3Q9NPG1 666 aa20.88■□□□□ 0.93
TRIM35-203ENST00000521253 REXO2Q9Y3B8 237 aaKnown RBP20.88■□□□□ 0.93
TRIM35-203ENST00000521253 A0A0A6YYK5 440 aaPredicted RBP20.87■□□□□ 0.93
TRIM35-203ENST00000521253 RCCD1A6NED2 376 aa20.87■□□□□ 0.93
TRIM35-203ENST00000521253 C3orf70A6NLC5 250 aaPredicted RBP20.87■□□□□ 0.93
TRIM35-203ENST00000521253 H0Y8X5 98 aa20.87■□□□□ 0.93
TRIM35-203ENST00000521253 TLR4O00206 839 aa20.87■□□□□ 0.93
TRIM35-203ENST00000521253 NEMP1O14524 444 aa20.87■□□□□ 0.93
TRIM35-203ENST00000521253 GIPC1O14908 333 aa20.87■□□□□ 0.93
TRIM35-203ENST00000521253 TSPAN6O43657 245 aa20.87■□□□□ 0.93
TRIM35-203ENST00000521253 SPOPO43791 374 aa20.87■□□□□ 0.93
TRIM35-203ENST00000521253 MAP3K6O95382 1288 aa20.87■□□□□ 0.93
TRIM35-203ENST00000521253 ZNF883P0CG24 379 aa20.87■□□□□ 0.93
TRIM35-203ENST00000521253 TNNT1P13805 278 aa20.87■□□□□ 0.93
TRIM35-203ENST00000521253 ITIH2P19823 946 aa20.87■□□□□ 0.93
TRIM35-203ENST00000521253 SCNN1BP51168 640 aa20.87■□□□□ 0.93
TRIM35-203ENST00000521253 RENBPP51606 427 aa20.87■□□□□ 0.93
TRIM35-203ENST00000521253 FGL2Q14314 439 aa20.87■□□□□ 0.93
TRIM35-203ENST00000521253 ZNF235Q14590 738 aa20.87■□□□□ 0.93
TRIM35-203ENST00000521253 STAT4Q14765 748 aa20.87■□□□□ 0.93
TRIM35-203ENST00000521253 ZNF423Q2M1K9 1284 aa20.87■□□□□ 0.93
TRIM35-203ENST00000521253 LRRC49Q8IUZ0 686 aa20.87■□□□□ 0.93
TRIM35-203ENST00000521253 RHOT1Q8IXI2 618 aa20.87■□□□□ 0.93
TRIM35-203ENST00000521253 MFSD2AQ8NA29 543 aa20.87■□□□□ 0.93
TRIM35-203ENST00000521253 HCAR2Q8TDS4 363 aa20.87■□□□□ 0.93
TRIM35-203ENST00000521253 ZNF641Q96N77 438 aaPredicted RBP20.87■□□□□ 0.93
TRIM35-203ENST00000521253 RNF157Q96PX1 679 aa20.87■□□□□ 0.93
TRIM35-203ENST00000521253 BAG1Q99933 345 aaPredicted RBP20.87■□□□□ 0.93
TRIM35-203ENST00000521253 SLC17A9Q9BYT1 436 aa20.87■□□□□ 0.93
TRIM35-203ENST00000521253 GOLPH3Q9H4A6 298 aa20.87■□□□□ 0.93
TRIM35-203ENST00000521253 ATP13A3Q9H7F0 1226 aa20.87■□□□□ 0.93
TRIM35-203ENST00000521253 TM7SF3Q9NS93 570 aa20.87■□□□□ 0.93
TRIM35-203ENST00000521253 IMPACTQ9P2X3 320 aa20.87■□□□□ 0.93
TRIM35-203ENST00000521253 ALG6Q9Y672 507 aa20.87■□□□□ 0.93
TRIM35-203ENST00000521253 TSPAN11A1L157 253 aa20.86■□□□□ 0.93
TRIM35-203ENST00000521253 IPO7O95373 1038 aaKnown RBP20.86■□□□□ 0.93
TRIM35-203ENST00000521253 KRT1P04264 644 aa20.86■□□□□ 0.93
TRIM35-203ENST00000521253 HNRNPA2B1P22626 353 aaKnown RBP20.86■□□□□ 0.93
TRIM35-203ENST00000521253 GARSP41250 739 aaKnown RBP20.86■□□□□ 0.93
TRIM35-203ENST00000521253 NXPH1P58417 271 aa20.86■□□□□ 0.93
TRIM35-203ENST00000521253 FOXK2Q01167 660 aa20.86■□□□□ 0.93
TRIM35-203ENST00000521253 GBE1Q04446 702 aa20.86■□□□□ 0.93
TRIM35-203ENST00000521253 PRAMEF14Q5SWL7 426 aa20.86■□□□□ 0.93
TRIM35-203ENST00000521253 TMEM139Q8IV31 216 aa20.86■□□□□ 0.93
TRIM35-203ENST00000521253 PGBD5Q8N414 524 aa20.86■□□□□ 0.93
TRIM35-203ENST00000521253 NSMCE1Q8WV22 266 aa20.86■□□□□ 0.93
TRIM35-203ENST00000521253 NSMCE3Q96MG7 304 aa20.86■□□□□ 0.93
TRIM35-203ENST00000521253 SALL4Q9UJQ4 1053 aa20.86■□□□□ 0.93
TRIM35-203ENST00000521253 TTC24A2A3L6 582 aaPredicted RBP20.85■□□□□ 0.93
TRIM35-203ENST00000521253 IGLON5A6NGN9 336 aa20.85■□□□□ 0.93
TRIM35-203ENST00000521253 ZNF487B1APH4 448 aa20.85■□□□□ 0.93
TRIM35-203ENST00000521253 PAK4O96013 591 aaPredicted RBP20.85■□□□□ 0.93
TRIM35-203ENST00000521253 CEACAM1P13688 526 aa20.85■□□□□ 0.93
TRIM35-203ENST00000521253 SERPINA4P29622 427 aa20.85■□□□□ 0.93
TRIM35-203ENST00000521253 AKT2P31751 481 aa20.85■□□□□ 0.93
TRIM35-203ENST00000521253 HSPA9P38646 679 aaKnown RBP20.85■□□□□ 0.93
TRIM35-203ENST00000521253 MMP13P45452 471 aa20.85■□□□□ 0.93
TRIM35-203ENST00000521253 AP1S1P61966 158 aa20.85■□□□□ 0.93
TRIM35-203ENST00000521253 UGP2Q16851 508 aa20.85■□□□□ 0.93
TRIM35-203ENST00000521253 CFAP58Q5T655 872 aa20.85■□□□□ 0.93
TRIM35-203ENST00000521253 MARC1Q5VT66 337 aa20.85■□□□□ 0.93
TRIM35-203ENST00000521253 IQCHQ86VS3 1027 aa20.85■□□□□ 0.93
TRIM35-203ENST00000521253 ZSWIM9Q86XI8 627 aa20.85■□□□□ 0.93
TRIM35-203ENST00000521253 VSIG1Q86XK7 387 aa20.85■□□□□ 0.93
TRIM35-203ENST00000521253 BBS5Q8N3I7 341 aa20.85■□□□□ 0.93
TRIM35-203ENST00000521253 ACRBPQ8NEB7 543 aa20.85■□□□□ 0.93
TRIM35-203ENST00000521253 MGME1Q9BQP7 344 aa20.85■□□□□ 0.93
TRIM35-203ENST00000521253 C1QTNF2Q9BXJ5 285 aa20.85■□□□□ 0.93
TRIM35-203ENST00000521253 SLC32A1Q9H598 525 aa20.85■□□□□ 0.93
TRIM35-203ENST00000521253 GDF3Q9NR23 364 aa20.85■□□□□ 0.93
TRIM35-203ENST00000521253 DDX56Q9NY93 547 aaKnown RBP20.85■□□□□ 0.93
TRIM35-203ENST00000521253 SH3BP5O60239 455 aa20.84■□□□□ 0.93
TRIM35-203ENST00000521253 CR2P20023 1033 aa20.84■□□□□ 0.93
TRIM35-203ENST00000521253 XPAP23025 273 aaPredicted RBP20.84■□□□□ 0.93
TRIM35-203ENST00000521253 CCT8P50990 548 aa20.84■□□□□ 0.93
TRIM35-203ENST00000521253 SUOXP51687 545 aa20.84■□□□□ 0.93
TRIM35-203ENST00000521253 CLDN2P57739 230 aa20.84■□□□□ 0.93
TRIM35-203ENST00000521253 BCL2L1Q07817 233 aa20.84■□□□□ 0.93
TRIM35-203ENST00000521253 OVGP1Q12889 678 aa20.84■□□□□ 0.93
TRIM35-203ENST00000521253 SLC10A2Q12908 348 aaPredicted RBP20.84■□□□□ 0.93
TRIM35-203ENST00000521253 BRAT1Q6PJG6 821 aa20.84■□□□□ 0.93
TRIM35-203ENST00000521253 GCNT7Q6ZNI0 430 aa20.84■□□□□ 0.93
TRIM35-203ENST00000521253 ZSCAN30Q86W11 494 aa20.84■□□□□ 0.93
TRIM35-203ENST00000521253 SPATS2Q86XZ4 545 aaKnown RBP20.84■□□□□ 0.93
TRIM35-203ENST00000521253 NAXDQ8IW45 347 aa20.84■□□□□ 0.93
TRIM35-203ENST00000521253 TEX26Q8N6G2 289 aa20.84■□□□□ 0.93
TRIM35-203ENST00000521253 PLD5Q8N7P1 536 aa20.84■□□□□ 0.93
TRIM35-203ENST00000521253 LRRN4Q8WUT4 740 aa20.84■□□□□ 0.93
TRIM35-203ENST00000521253 RNF25Q96BH1 459 aaPredicted RBP20.84■□□□□ 0.93
TRIM35-203ENST00000521253 ECHDC3Q96DC8 303 aa20.84■□□□□ 0.93
TRIM35-203ENST00000521253 CAMK1GQ96NX5 476 aa20.84■□□□□ 0.93
TRIM35-203ENST00000521253 ELF4Q99607 663 aaPredicted RBP20.84■□□□□ 0.93
TRIM35-203ENST00000521253 PCDH12Q9NPG4 1184 aa20.84■□□□□ 0.93
TRIM35-203ENST00000521253 DTLQ9NZJ0 730 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms