RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 SCAMP1O15126 338 aa20.76■□□□□ 0.91
SNHG6-203ENST00000520944 MMP20O60882 483 aa20.76■□□□□ 0.91
SNHG6-203ENST00000520944 TM7SF2O76062 418 aa20.76■□□□□ 0.91
SNHG6-203ENST00000520944 CSF2P04141 144 aa20.76■□□□□ 0.91
SNHG6-203ENST00000520944 SKILP12757 684 aa20.76■□□□□ 0.91
SNHG6-203ENST00000520944 TIMP2P16035 220 aa20.76■□□□□ 0.91
SNHG6-203ENST00000520944 PAPOLAP51003 745 aaKnown RBP20.76■□□□□ 0.91
SNHG6-203ENST00000520944 CLDN6P56747 220 aa20.76■□□□□ 0.91
SNHG6-203ENST00000520944 PTK2BQ14289 1009 aa20.76■□□□□ 0.91
SNHG6-203ENST00000520944 IQCB1Q15051 598 aa20.76■□□□□ 0.91
SNHG6-203ENST00000520944 CA9Q16790 459 aa20.76■□□□□ 0.91
SNHG6-203ENST00000520944 PPP6R3Q5H9R7 873 aaPredicted RBP20.76■□□□□ 0.91
SNHG6-203ENST00000520944 LRRC73Q5JTD7 316 aa20.76■□□□□ 0.91
SNHG6-203ENST00000520944 CFAP58Q5T655 872 aa20.76■□□□□ 0.91
SNHG6-203ENST00000520944 PSTKQ8IV42 348 aaKnown RBP20.76■□□□□ 0.91
SNHG6-203ENST00000520944 HCAR2Q8TDS4 363 aa20.76■□□□□ 0.91
SNHG6-203ENST00000520944 VOPP1Q96AW1 172 aa20.76■□□□□ 0.91
SNHG6-203ENST00000520944 SNRNP25Q9BV90 132 aaKnown RBP20.76■□□□□ 0.91
SNHG6-203ENST00000520944 DUSP23Q9BVJ7 150 aa20.76■□□□□ 0.91
SNHG6-203ENST00000520944 SLC39A8Q9C0K1 460 aa20.76■□□□□ 0.91
SNHG6-203ENST00000520944 GPR27Q9NS67 375 aa20.76■□□□□ 0.91
SNHG6-203ENST00000520944 EVA1BQ9NVM1 165 aa20.76■□□□□ 0.91
SNHG6-203ENST00000520944 MYO1AQ9UBC5 1043 aa20.76■□□□□ 0.91
SNHG6-203ENST00000520944 LHX6Q9UPM6 363 aa20.76■□□□□ 0.91
SNHG6-203ENST00000520944 TRPM6Q9BX84 2022 aa20.75■□□□□ 0.91
SNHG6-203ENST00000520944 INSIG1O15503 277 aa20.75■□□□□ 0.91
SNHG6-203ENST00000520944 SPINT1O43278 529 aa20.75■□□□□ 0.91
SNHG6-203ENST00000520944 PRAMEF11O60813 436 aa20.75■□□□□ 0.91
SNHG6-203ENST00000520944 PALMO75781 387 aa20.75■□□□□ 0.91
SNHG6-203ENST00000520944 NME1P15531 152 aaKnown RBP20.75■□□□□ 0.91
SNHG6-203ENST00000520944 MIPP30301 263 aa20.75■□□□□ 0.91
SNHG6-203ENST00000520944 ZNF135P52742 658 aaPredicted RBP20.75■□□□□ 0.91
SNHG6-203ENST00000520944 THOP1P52888 689 aa20.75■□□□□ 0.91
SNHG6-203ENST00000520944 ELP6Q0PNE2 266 aa20.75■□□□□ 0.91
SNHG6-203ENST00000520944 FIGNQ5HY92 759 aa20.75■□□□□ 0.91
SNHG6-203ENST00000520944 E4F1Q66K89 784 aaPredicted RBP20.75■□□□□ 0.91
SNHG6-203ENST00000520944 RFX8Q6ZV50 586 aa20.75■□□□□ 0.91
SNHG6-203ENST00000520944 VPS36Q86VN1 386 aa20.75■□□□□ 0.91
SNHG6-203ENST00000520944 ARFGAP1Q8N6T3 406 aa20.75■□□□□ 0.91
SNHG6-203ENST00000520944 CENPTQ96BT3 561 aa20.75■□□□□ 0.91
SNHG6-203ENST00000520944 NXPE2Q96DL1 559 aa20.75■□□□□ 0.91
SNHG6-203ENST00000520944 KCTD15Q96SI1 283 aaPredicted RBP20.75■□□□□ 0.91
SNHG6-203ENST00000520944 WRAP53Q9BUR4 548 aaKnown RBP20.75■□□□□ 0.91
SNHG6-203ENST00000520944 TRIM7Q9C029 511 aa20.75■□□□□ 0.91
SNHG6-203ENST00000520944 SUV39H2Q9H5I1 410 aa20.75■□□□□ 0.91
SNHG6-203ENST00000520944 LHX3Q9UBR4 397 aa20.75■□□□□ 0.91
SNHG6-203ENST00000520944 GPSM3Q9Y4H4 160 aa20.75■□□□□ 0.91
SNHG6-203ENST00000520944 BZW2Q9Y6E2 419 aaKnown RBP20.75■□□□□ 0.91
SNHG6-203ENST00000520944 KNTC1P50748 2209 aa20.75■□□□□ 0.91
SNHG6-203ENST00000520944 NBEAQ8NFP9 2946 aa20.75■□□□□ 0.91
SNHG6-203ENST00000520944 TP53BP1Q12888 1972 aaPredicted RBP20.75■□□□□ 0.91
SNHG6-203ENST00000520944 FAM208BQ5VWN6 2430 aa20.75■□□□□ 0.91
SNHG6-203ENST00000520944 PIGNO95427 931 aa20.74■□□□□ 0.91
SNHG6-203ENST00000520944 CKMT1AP12532 417 aa20.74■□□□□ 0.91
SNHG6-203ENST00000520944 JUNDP17535 347 aa20.74■□□□□ 0.91
SNHG6-203ENST00000520944 ERCC2P18074 760 aa20.74■□□□□ 0.91
SNHG6-203ENST00000520944 DUSP3P51452 185 aaPredicted RBP20.74■□□□□ 0.91
SNHG6-203ENST00000520944 PFN3P60673 137 aa20.74■□□□□ 0.91
SNHG6-203ENST00000520944 C19orf48Q6RUI8 117 aa20.74■□□□□ 0.91
SNHG6-203ENST00000520944 ZNF548Q8NEK5 533 aaPredicted RBP20.74■□□□□ 0.91
SNHG6-203ENST00000520944 BTN2A2Q8WVV5 523 aa20.74■□□□□ 0.91
SNHG6-203ENST00000520944 ZNF641Q96N77 438 aaPredicted RBP20.74■□□□□ 0.91
SNHG6-203ENST00000520944 PEBP4Q96S96 227 aa20.74■□□□□ 0.91
SNHG6-203ENST00000520944 FUCA2Q9BTY2 467 aa20.74■□□□□ 0.91
SNHG6-203ENST00000520944 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.74■□□□□ 0.91
SNHG6-203ENST00000520944 PDFQ9HBH1 243 aa20.74■□□□□ 0.91
SNHG6-203ENST00000520944 CLCA2Q9UQC9 943 aa20.74■□□□□ 0.91
SNHG6-203ENST00000520944 AK5Q9Y6K8 562 aa20.74■□□□□ 0.91
SNHG6-203ENST00000520944 SYCE3A1L190 88 aa20.73■□□□□ 0.91
SNHG6-203ENST00000520944 K7ESM1 405 aa20.73■□□□□ 0.91
SNHG6-203ENST00000520944 DFFAO00273 331 aa20.73■□□□□ 0.91
SNHG6-203ENST00000520944 ITIH2P19823 946 aa20.73■□□□□ 0.91
SNHG6-203ENST00000520944 HCAR3P49019 387 aa20.73■□□□□ 0.91
SNHG6-203ENST00000520944 YPEL5P62699 121 aa20.73■□□□□ 0.91
SNHG6-203ENST00000520944 FANCCQ00597 558 aa20.73■□□□□ 0.91
SNHG6-203ENST00000520944 INSM1Q01101 510 aaPredicted RBP20.73■□□□□ 0.91
SNHG6-203ENST00000520944 ACAP1Q15027 740 aa20.73■□□□□ 0.91
SNHG6-203ENST00000520944 UGP2Q16851 508 aa20.73■□□□□ 0.91
SNHG6-203ENST00000520944 KLHL40Q2TBA0 621 aa20.73■□□□□ 0.91
SNHG6-203ENST00000520944 TDRD12Q587J7 1177 aaKnown RBP20.73■□□□□ 0.91
SNHG6-203ENST00000520944 ERAP2Q6P179 960 aa20.73■□□□□ 0.91
SNHG6-203ENST00000520944 CACTIN-AS1Q8N1I8 211 aa20.73■□□□□ 0.91
SNHG6-203ENST00000520944 FAM181AQ8N9Y4 354 aa20.73■□□□□ 0.91
SNHG6-203ENST00000520944 RFFLQ8WZ73 363 aa20.73■□□□□ 0.91
SNHG6-203ENST00000520944 APOLD1Q96LR9 279 aa20.73■□□□□ 0.91
SNHG6-203ENST00000520944 TUBGCP5Q96RT8 1024 aa20.73■□□□□ 0.91
SNHG6-203ENST00000520944 ISCUQ9H1K1 167 aa20.73■□□□□ 0.91
SNHG6-203ENST00000520944 ZWILCHQ9H900 591 aa20.73■□□□□ 0.91
SNHG6-203ENST00000520944 SP110Q9HB58 689 aa20.73■□□□□ 0.91
SNHG6-203ENST00000520944 USP29Q9HBJ7 922 aa20.73■□□□□ 0.91
SNHG6-203ENST00000520944 CBX8Q9HC52 389 aa20.73■□□□□ 0.91
SNHG6-203ENST00000520944 CSNK1G3Q9Y6M4 447 aa20.73■□□□□ 0.91
SNHG6-203ENST00000520944 CHD5Q8TDI0 1954 aa20.73■□□□□ 0.91
SNHG6-203ENST00000520944 TOR1BO14657 336 aa20.72■□□□□ 0.91
SNHG6-203ENST00000520944 AQP9O43315 295 aa20.72■□□□□ 0.91
SNHG6-203ENST00000520944 LRCH4O75427 683 aa20.72■□□□□ 0.91
SNHG6-203ENST00000520944 NEBLO76041 1014 aa20.72■□□□□ 0.91
SNHG6-203ENST00000520944 GIMD1P0DJR0 217 aa20.72■□□□□ 0.91
SNHG6-203ENST00000520944 PCK1P35558 622 aa20.72■□□□□ 0.91
SNHG6-203ENST00000520944 CSNK1DP48730 415 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms