RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 IGFALSP35858 605 aa15.36■□□□□ 0.05
CSMD1-207ENST00000520451 YBEYP58557 167 aaPredicted RBP15.36■□□□□ 0.05
CSMD1-207ENST00000520451 RPL7AP62424 266 aaKnown RBP15.36■□□□□ 0.05
CSMD1-207ENST00000520451 CCDC173Q0VFZ6 552 aa15.36■□□□□ 0.05
CSMD1-207ENST00000520451 PTK2BQ14289 1009 aa15.36■□□□□ 0.05
CSMD1-207ENST00000520451 STX1AQ16623 288 aa15.36■□□□□ 0.05
CSMD1-207ENST00000520451 INO80DQ53TQ3 878 aaPredicted RBP15.36■□□□□ 0.05
CSMD1-207ENST00000520451 DCUN1D2Q6PH85 259 aa15.36■□□□□ 0.05
CSMD1-207ENST00000520451 RBFAQ8N0V3 343 aa15.36■□□□□ 0.05
CSMD1-207ENST00000520451 BTN2A2Q8WVV5 523 aa15.36■□□□□ 0.05
CSMD1-207ENST00000520451 CENPTQ96BT3 561 aa15.36■□□□□ 0.05
CSMD1-207ENST00000520451 ERGIC2Q96RQ1 377 aa15.36■□□□□ 0.05
CSMD1-207ENST00000520451 UBL7Q96S82 380 aaPredicted RBP15.36■□□□□ 0.05
CSMD1-207ENST00000520451 IL12RB2Q99665 862 aa15.36■□□□□ 0.05
CSMD1-207ENST00000520451 CNPY3Q9BT09 278 aa15.36■□□□□ 0.05
CSMD1-207ENST00000520451 WRAP53Q9BUR4 548 aaKnown RBP15.36■□□□□ 0.05
CSMD1-207ENST00000520451 C1QTNF7Q9BXJ2 289 aa15.36■□□□□ 0.05
CSMD1-207ENST00000520451 PRORYQ9H606 182 aa15.36■□□□□ 0.05
CSMD1-207ENST00000520451 CATSPERBQ9H7T0 1116 aa15.36■□□□□ 0.05
CSMD1-207ENST00000520451 NCKIPSDQ9NZQ3 722 aa15.36■□□□□ 0.05
CSMD1-207ENST00000520451 SPASTQ9UBP0 616 aa15.36■□□□□ 0.05
CSMD1-207ENST00000520451 APOBEC3BQ9UH17 382 aaKnown RBP15.36■□□□□ 0.05
CSMD1-207ENST00000520451 RAI2Q9Y5P3 530 aa15.36■□□□□ 0.05
CSMD1-207ENST00000520451 WASH4PA8MWX3 477 aa15.35■□□□□ 0.05
CSMD1-207ENST00000520451 INSIG1O15503 277 aa15.35■□□□□ 0.05
CSMD1-207ENST00000520451 USP12O75317 370 aa15.35■□□□□ 0.05
CSMD1-207ENST00000520451 TM7SF2O76062 418 aa15.35■□□□□ 0.05
CSMD1-207ENST00000520451 TIMP2P16035 220 aa15.35■□□□□ 0.05
CSMD1-207ENST00000520451 DESP17661 470 aa15.35■□□□□ 0.05
CSMD1-207ENST00000520451 ITIH2P19823 946 aa15.35■□□□□ 0.05
CSMD1-207ENST00000520451 XPAP23025 273 aaPredicted RBP15.35■□□□□ 0.05
CSMD1-207ENST00000520451 AIF1P55008 147 aa15.35■□□□□ 0.05
CSMD1-207ENST00000520451 GABREP78334 506 aa15.35■□□□□ 0.05
CSMD1-207ENST00000520451 SERINC3Q13530 473 aa15.35■□□□□ 0.05
CSMD1-207ENST00000520451 PARP15Q460N3 678 aa15.35■□□□□ 0.05
CSMD1-207ENST00000520451 GUSBP11Q6P575 273 aa15.35■□□□□ 0.05
CSMD1-207ENST00000520451 EFL1Q7Z2Z2 1120 aaKnown RBP15.35■□□□□ 0.05
CSMD1-207ENST00000520451 PHACTR4Q8IZ21 702 aa15.35■□□□□ 0.05
CSMD1-207ENST00000520451 EXOC2Q96KP1 924 aa15.35■□□□□ 0.05
CSMD1-207ENST00000520451 FCRL3Q96P31 734 aaPredicted RBP15.35■□□□□ 0.05
CSMD1-207ENST00000520451 NCAPGQ9BPX3 1015 aa15.35■□□□□ 0.05
CSMD1-207ENST00000520451 TCEAL2Q9H3H9 227 aaPredicted RBP15.35■□□□□ 0.05
CSMD1-207ENST00000520451 DKK3Q9UBP4 350 aa15.35■□□□□ 0.05
CSMD1-207ENST00000520451 LHX3Q9UBR4 397 aa15.35■□□□□ 0.05
CSMD1-207ENST00000520451 UBA2Q9UBT2 640 aaPredicted RBP15.35■□□□□ 0.05
CSMD1-207ENST00000520451 SALL4Q9UJQ4 1053 aa15.35■□□□□ 0.05
CSMD1-207ENST00000520451 MFHAS1Q9Y4C4 1052 aa15.35■□□□□ 0.05
CSMD1-207ENST00000520451 PTPRQQ9UMZ3 2332 aa15.34■□□□□ 0.05
CSMD1-207ENST00000520451 TPP1O14773 563 aa15.34■□□□□ 0.05
CSMD1-207ENST00000520451 FGF10O15520 208 aaPredicted RBP15.34■□□□□ 0.05
CSMD1-207ENST00000520451 GCATO75600 419 aa15.34■□□□□ 0.05
CSMD1-207ENST00000520451 PIGNO95427 931 aa15.34■□□□□ 0.05
CSMD1-207ENST00000520451 FERP16591 822 aa15.34■□□□□ 0.05
CSMD1-207ENST00000520451 ANP32AP39687 249 aaKnown RBP15.34■□□□□ 0.05
CSMD1-207ENST00000520451 TPI1P60174 286 aa15.34■□□□□ 0.05
CSMD1-207ENST00000520451 YPEL5P62699 121 aa15.34■□□□□ 0.05
CSMD1-207ENST00000520451 C1orf61Q13536 156 aa15.34■□□□□ 0.05
CSMD1-207ENST00000520451 NR0B2Q15466 257 aa15.34■□□□□ 0.05
CSMD1-207ENST00000520451 KLHL40Q2TBA0 621 aa15.34■□□□□ 0.05
CSMD1-207ENST00000520451 PRRT3Q5FWE3 981 aa15.34■□□□□ 0.05
CSMD1-207ENST00000520451 PPP1R15BQ5SWA1 713 aa15.34■□□□□ 0.05
CSMD1-207ENST00000520451 ACAD10Q6JQN1 1059 aa15.34■□□□□ 0.05
CSMD1-207ENST00000520451 MCOLN2Q8IZK6 566 aa15.34■□□□□ 0.05
CSMD1-207ENST00000520451 UMODL1-AS1Q8N2C9 162 aa15.34■□□□□ 0.05
CSMD1-207ENST00000520451 TP53I13Q8NBR0 393 aaPredicted RBP15.34■□□□□ 0.05
CSMD1-207ENST00000520451 ZNF578Q96N58 590 aaPredicted RBP15.34■□□□□ 0.05
CSMD1-207ENST00000520451 GBP4Q96PP9 640 aa15.34■□□□□ 0.05
CSMD1-207ENST00000520451 LGMNQ99538 433 aa15.34■□□□□ 0.05
CSMD1-207ENST00000520451 SLC13A1Q9BZW2 595 aa15.34■□□□□ 0.05
CSMD1-207ENST00000520451 MBNL1Q9NR56 388 aaKnown RBP15.34■□□□□ 0.05
CSMD1-207ENST00000520451 PNMA8BQ9ULN7 279 aaPredicted RBP15.34■□□□□ 0.05
CSMD1-207ENST00000520451 EME2A4GXA9 379 aaPredicted RBP15.33■□□□□ 0.04
CSMD1-207ENST00000520451 LRRC10BA6NIK2 292 aa15.33■□□□□ 0.04
CSMD1-207ENST00000520451 TOR1BO14657 336 aa15.33■□□□□ 0.04
CSMD1-207ENST00000520451 RIOK3O14730 519 aaKnown RBP15.33■□□□□ 0.04
CSMD1-207ENST00000520451 MUSKO15146 869 aa15.33■□□□□ 0.04
CSMD1-207ENST00000520451 CCDC172P0C7W6 258 aa15.33■□□□□ 0.04
CSMD1-207ENST00000520451 TGM2P21980 687 aa15.33■□□□□ 0.04
CSMD1-207ENST00000520451 EIF4A3P38919 411 aaKnown RBP15.33■□□□□ 0.04
CSMD1-207ENST00000520451 SUOXP51687 545 aa15.33■□□□□ 0.04
CSMD1-207ENST00000520451 ADKP55263 362 aaKnown RBP15.33■□□□□ 0.04
CSMD1-207ENST00000520451 PCBP4P57723 403 aaKnown RBP15.33■□□□□ 0.04
CSMD1-207ENST00000520451 OGDHQ02218 1023 aa15.33■□□□□ 0.04
CSMD1-207ENST00000520451 TLE3Q04726 772 aa15.33■□□□□ 0.04
CSMD1-207ENST00000520451 ELP6Q0PNE2 266 aa15.33■□□□□ 0.04
CSMD1-207ENST00000520451 IRF4Q15306 451 aa15.33■□□□□ 0.04
CSMD1-207ENST00000520451 CYTH1Q15438 398 aa15.33■□□□□ 0.04
CSMD1-207ENST00000520451 TMEM52BQ4KMG9 183 aa15.33■□□□□ 0.04
CSMD1-207ENST00000520451 FAXCQ5TGI0 409 aa15.33■□□□□ 0.04
CSMD1-207ENST00000520451 CRTC1Q6UUV9 634 aa15.33■□□□□ 0.04
CSMD1-207ENST00000520451 MACC1Q6ZN28 852 aa15.33■□□□□ 0.04
CSMD1-207ENST00000520451 APTXQ7Z2E3 356 aaKnown RBP15.33■□□□□ 0.04
CSMD1-207ENST00000520451 DNAAF5Q86Y56 855 aa15.33■□□□□ 0.04
CSMD1-207ENST00000520451 SPACA3Q8IXA5 215 aa15.33■□□□□ 0.04
CSMD1-207ENST00000520451 LSMEM2Q8N112 164 aa15.33■□□□□ 0.04
CSMD1-207ENST00000520451 ZNF248Q8NDW4 579 aa15.33■□□□□ 0.04
CSMD1-207ENST00000520451 GLMNQ92990 594 aa15.33■□□□□ 0.04
CSMD1-207ENST00000520451 NAF1Q96HR8 494 aaKnown RBP15.33■□□□□ 0.04
CSMD1-207ENST00000520451 LRRC61Q9BV99 259 aa15.33■□□□□ 0.04
CSMD1-207ENST00000520451 CPEB1Q9BZB8 566 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms