RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 MS4A13Q5J8X5 152 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 BSPRYQ5W0U4 402 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 HIST2H2BCQ6DN03 193 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 TCTN3Q6NUS6 607 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 ERN2Q76MJ5 926 aaKnown RBP4.99□□□□□ -1.61
SDCBP-207ENST00000520168 EPM2AIP1Q7L775 607 aaPredicted RBP4.99□□□□□ -1.61
SDCBP-207ENST00000520168 ZFAND4Q86XD8 727 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 GKN2Q86XP6 184 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 FRS2Q8WU20 508 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 ASB12Q8WXK4 309 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 IRGQQ8WZA9 623 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 USP7Q93009 1102 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 NKD1Q969G9 470 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 CCDC74AQ96AQ1 378 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 KIAA1143Q96AT1 154 aaPredicted RBP4.99□□□□□ -1.61
SDCBP-207ENST00000520168 EPSTI1Q96J88 318 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 FEM1CQ96JP0 617 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 SLC45A3Q96JT2 553 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 BMFQ96LC9 184 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 PRICKLE1Q96MT3 831 aaPredicted RBP4.99□□□□□ -1.61
SDCBP-207ENST00000520168 SERPINB11Q96P15 392 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 TWNKQ96RR1 684 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 MYOCQ99972 504 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 TRIM62Q9BVG3 475 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 FGFBP2Q9BYJ0 223 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 SLC17A9Q9BYT1 436 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 CPEB1Q9BZB8 566 aaKnown RBP4.99□□□□□ -1.61
SDCBP-207ENST00000520168 ASPSCR1Q9BZE9 553 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 ULBP1Q9BZM6 244 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 FOXP3Q9BZS1 431 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 NIF3L1Q9GZT8 377 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 INTS2Q9H0H0 1204 aaKnown RBP4.99□□□□□ -1.61
SDCBP-207ENST00000520168 LRRN3Q9H3W5 708 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 CUEDC2Q9H467 287 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 LRRC4Q9HBW1 653 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 FZD3Q9NPG1 666 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 ZNF71Q9NQZ8 489 aaPredicted RBP4.99□□□□□ -1.61
SDCBP-207ENST00000520168 FOXJ2Q9P0K8 574 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 HESX1Q9UBX0 185 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 APPL1Q9UKG1 709 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 SARDHQ9UL12 918 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 NAALADL1Q9UQQ1 740 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 TLR6Q9Y2C9 796 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 KCTD3Q9Y597 815 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 PCDHGA3Q9Y5H0 932 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 GPC6Q9Y625 555 aaPredicted RBP4.99□□□□□ -1.61
SDCBP-207ENST00000520168 HIVEP3Q5T1R4 2406 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 DOCK4Q8N1I0 1966 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 SHANK1Q9Y566 2161 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 ANKRD36A6QL64 1941 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 POM121BA6NF01 834 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 TCAF2A6NFQ2 919 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 MKRN2OSH3BPM6 223 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 KPNA3O00505 521 aaPredicted RBP4.98□□□□□ -1.61
SDCBP-207ENST00000520168 YY2O15391 372 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 MSI1O43347 362 aaKnown RBP4.98□□□□□ -1.61
SDCBP-207ENST00000520168 RRP9O43818 475 aaKnown RBP4.98□□□□□ -1.61
SDCBP-207ENST00000520168 APOEP02649 317 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 PRKCGP05129 697 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 KRT7P08729 469 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 SETSIPP0DME0 302 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 GLB1P16278 677 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 WT1P19544 449 aaPredicted RBP4.98□□□□□ -1.61
SDCBP-207ENST00000520168 ITIH1P19827 911 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 MAN1A1P33908 653 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 HOXD13P35453 343 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 CASP4P49662 377 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 STK19P49842 368 aaPredicted RBP4.98□□□□□ -1.61
SDCBP-207ENST00000520168 NEK3P51956 506 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 METAP1P53582 386 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 MAPK10P53779 464 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 CLDN2P57739 230 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 RPS24P62847 133 aaKnown RBP4.98□□□□□ -1.61
SDCBP-207ENST00000520168 ENPEPQ07075 957 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 ADIGQ0VDE8 80 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 CDC20Q12834 499 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 SGCGQ13326 291 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 DRAP1Q14919 205 aaPredicted RBP4.98□□□□□ -1.61
SDCBP-207ENST00000520168 OCLNQ16625 522 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 DCAF6Q58WW2 860 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 FSCBQ5H9T9 825 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 RABGAP1LQ5R372 815 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 FAM26FQ5R3K3 315 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 ARHGAP17Q68EM7 881 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 OR6B2Q6IFH4 312 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 CNNM4Q6P4Q7 775 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 MACC1Q6ZN28 852 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 CLEC17AQ6ZS10 378 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 BHLHA9Q7RTU4 235 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 TIPARPQ7Z3E1 657 aaKnown RBP4.98□□□□□ -1.61
SDCBP-207ENST00000520168 CCNJLQ8IV13 435 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 ANKMY2Q8IV38 441 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 SLC9A9Q8IVB4 645 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 SLITRK4Q8IW52 837 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 FAM114A1Q8IWE2 563 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 PHACTR4Q8IZ21 702 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 SH2D3CQ8N5H7 860 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.98□□□□□ -1.61
SDCBP-207ENST00000520168 ATL2Q8NHH9 583 aa4.98□□□□□ -1.61
SDCBP-207ENST00000520168 CPT1CQ8TCG5 803 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms