RNA–Protein interactions for RNA: ENST00000520166.5

TSNARE1-205, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSNARE1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-205ENST00000520166 CCDC78A2IDD5 438 aa17.18■□□□□ 0.34
TSNARE1-205ENST00000520166 PIAS1O75925 651 aa17.18■□□□□ 0.34
TSNARE1-205ENST00000520166 SRPRAP08240 638 aaKnown RBP17.18■□□□□ 0.34
TSNARE1-205ENST00000520166 SRFP11831 508 aa17.18■□□□□ 0.34
TSNARE1-205ENST00000520166 MAGEA4P43358 317 aa17.18■□□□□ 0.34
TSNARE1-205ENST00000520166 KIR2DL1P43626 348 aaPredicted RBP17.18■□□□□ 0.34
TSNARE1-205ENST00000520166 ARL4CP56559 192 aa17.18■□□□□ 0.34
TSNARE1-205ENST00000520166 SEMG2Q02383 582 aa17.18■□□□□ 0.34
TSNARE1-205ENST00000520166 MSLNQ13421 630 aaPredicted RBP17.18■□□□□ 0.34
TSNARE1-205ENST00000520166 SMAD1Q15797 465 aaKnown RBP17.18■□□□□ 0.34
TSNARE1-205ENST00000520166 DNAAF3Q8N9W5 541 aa17.18■□□□□ 0.34
TSNARE1-205ENST00000520166 GRIN3AQ8TCU5 1115 aa17.18■□□□□ 0.34
TSNARE1-205ENST00000520166 CAVIN3Q969G5 261 aa17.18■□□□□ 0.34
TSNARE1-205ENST00000520166 ISG20Q96AZ6 181 aaKnown RBP17.18■□□□□ 0.34
TSNARE1-205ENST00000520166 CDC42EP4Q9H3Q1 356 aaKnown RBP17.18■□□□□ 0.34
TSNARE1-205ENST00000520166 ZDHHC6Q9H6R6 413 aa17.18■□□□□ 0.34
TSNARE1-205ENST00000520166 THAP10Q9P2Z0 257 aaPredicted RBP17.18■□□□□ 0.34
TSNARE1-205ENST00000520166 CA14Q9ULX7 337 aa17.18■□□□□ 0.34
TSNARE1-205ENST00000520166 CHMP2BQ9UQN3 213 aa17.18■□□□□ 0.34
TSNARE1-205ENST00000520166 ANKRD36A6QL64 1941 aa17.17■□□□□ 0.34
TSNARE1-205ENST00000520166 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.17■□□□□ 0.34
TSNARE1-205ENST00000520166 TRAFD1O14545 582 aaPredicted RBP17.17■□□□□ 0.34
TSNARE1-205ENST00000520166 PPFIA2O75334 1257 aa17.17■□□□□ 0.34
TSNARE1-205ENST00000520166 ASLP04424 464 aa17.17■□□□□ 0.34
TSNARE1-205ENST00000520166 TUBBP07437 444 aa17.17■□□□□ 0.34
TSNARE1-205ENST00000520166 CDK18Q07002 472 aa17.17■□□□□ 0.34
TSNARE1-205ENST00000520166 SLC1A5Q15758 541 aa17.17■□□□□ 0.34
TSNARE1-205ENST00000520166 TMEM196Q5HYL7 178 aa17.17■□□□□ 0.34
TSNARE1-205ENST00000520166 C9orf64Q5T6V5 341 aa17.17■□□□□ 0.34
TSNARE1-205ENST00000520166 TPRG1Q6ZUI0 275 aa17.17■□□□□ 0.34
TSNARE1-205ENST00000520166 RALGPS2Q86X27 583 aaPredicted RBP17.17■□□□□ 0.34
TSNARE1-205ENST00000520166 STK40Q8N2I9 435 aa17.17■□□□□ 0.34
TSNARE1-205ENST00000520166 PCDH20Q8N6Y1 951 aaKnown RBP17.17■□□□□ 0.34
TSNARE1-205ENST00000520166 HNRNPLLQ8WVV9 542 aaKnown RBP17.17■□□□□ 0.34
TSNARE1-205ENST00000520166 DNASE1L2Q92874 299 aa17.17■□□□□ 0.34
TSNARE1-205ENST00000520166 ZNF778Q96MU6 729 aa17.17■□□□□ 0.34
TSNARE1-205ENST00000520166 FSD1LQ9BXM9 530 aa17.17■□□□□ 0.34
TSNARE1-205ENST00000520166 TDRD1Q9BXT4 1180 aaKnown RBP17.17■□□□□ 0.34
TSNARE1-205ENST00000520166 CEP44Q9C0F1 390 aa17.17■□□□□ 0.34
TSNARE1-205ENST00000520166 SLC2A4RGQ9NR83 387 aa17.17■□□□□ 0.34
TSNARE1-205ENST00000520166 NINJ2Q9NZG7 142 aa17.17■□□□□ 0.34
TSNARE1-205ENST00000520166 SARDHQ9UL12 918 aa17.17■□□□□ 0.34
TSNARE1-205ENST00000520166 FAM50BQ9Y247 325 aa17.17■□□□□ 0.34
TSNARE1-205ENST00000520166 TEX264Q9Y6I9 313 aa17.17■□□□□ 0.34
TSNARE1-205ENST00000520166 E7ESA3 106 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 ALOX15BO15296 676 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 TIMM44O43615 452 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 SIN3BO75182 1162 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 IGSF6O95976 241 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 HSPA9P38646 679 aaKnown RBP17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 GPX6P59796 221 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 SNRPD1P62314 119 aaKnown RBP17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 CDK16Q00536 496 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 EIF4HQ15056 248 aaKnown RBP17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 ARSIQ5FYB1 569 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 LRRC73Q5JTD7 316 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 EMBQ6PCB8 327 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 PDIK1LQ8N165 341 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 FBXO36Q8NEA4 188 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 NECAB3Q96P71 396 aaPredicted RBP17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 VPS45Q9NRW7 570 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 MTF2Q9Y483 593 aaPredicted RBP17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 PCDHB9Q9Y5E1 797 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 SPO11Q9Y5K1 396 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 WASF2Q9Y6W5 498 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 MYLKQ15746 1914 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 MUC3AQ02505 3323 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 C19orf67A6NJJ6 358 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 ERI2A8K979 691 aaKnown RBP17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 AURKAO14965 403 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 FZD6O60353 706 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 ACSL3O95573 720 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 GSRP00390 522 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 UGT2B4P06133 528 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 CTPS1P17812 591 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 HSD17B3P37058 310 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 PMS2P54278 862 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 ST8SIA6P61647 398 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 PTPRCAPQ14761 206 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 POU6F1Q14863 301 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 SERPINA13PQ6UXR4 307 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 CENPUQ71F23 418 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 UNC5BQ8IZJ1 945 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 ZNF513Q8N8E2 541 aaPredicted RBP17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 LPCAT1Q8NF37 534 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 IFT43Q96FT9 208 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 FAM129BQ96TA1 746 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 CHRAC1Q9NRG0 131 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 NDRG2Q9UN36 371 aaKnown RBP17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 DUSP12Q9UNI6 340 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 STARD13Q9Y3M8 1113 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 KCTD3Q9Y597 815 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 MAD1L1Q9Y6D9 718 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 STON1Q9Y6Q2 735 aa17.16■□□□□ 0.34
TSNARE1-205ENST00000520166 A0A0C4DFX4 3053 aa17.15■□□□□ 0.34
TSNARE1-205ENST00000520166 CXorf51AA0A1B0GTR3 108 aa17.15■□□□□ 0.34
TSNARE1-205ENST00000520166 KRBA1A5PL33 1030 aa17.15■□□□□ 0.34
TSNARE1-205ENST00000520166 A8MX80 341 aa17.15■□□□□ 0.34
TSNARE1-205ENST00000520166 PLK4O00444 970 aa17.15■□□□□ 0.34
TSNARE1-205ENST00000520166 PSMD3O43242 534 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms