RNA–Protein interactions for RNA: ENST00000520143.1

IGHV3-57-201, Transcript of immunoglobulin heavy variable 3-57 (pseudogene), humanhuman

BASIC

Gene IGHV3-57, Length 280 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-57-201ENST00000520143 KIAA0408Q6ZU52 694 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 CCDC121Q6ZUS5 278 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 TMC7Q7Z402 723 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 STRA8Q7Z7C7 330 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 LCA5Q86VQ0 697 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 TMC8Q8IU68 726 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 LMNTD2Q8IXW0 634 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 CFAP52Q8N1V2 620 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 ELMOD1Q8N336 334 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 CPXM2Q8N436 756 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 OTUD6BQ8N6M0 293 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 KREMEN2Q8NCW0 462 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 OR7D4Q8NG98 312 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 ZNF398Q8TD17 642 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 ADAMTS19Q8TE59 1207 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 BADQ92934 168 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 PEX13Q92968 403 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 GCNAQ96QF7 691 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 SEMA3CQ99985 751 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 MGME1Q9BQP7 344 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 RHOJQ9H4E5 214 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 MANSC1Q9H8J5 431 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 IARS2Q9NSE4 1012 aaKnown RBP6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 TREX1Q9NSU2 369 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 PCMTD2Q9NV79 361 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 UBA2Q9UBT2 640 aaPredicted RBP6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 LSM7Q9UK45 103 aaKnown RBP6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 PRDM4Q9UKN5 801 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 RIMKLBQ9ULI2 386 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 ARL2BPQ9Y2Y0 163 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 PSAT1Q9Y617 370 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 SLC4A7Q9Y6M7 1214 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 GBF1Q92538 1859 aa6.72□□□□□ -1.33
IGHV3-57-201ENST00000520143 NOTCH4Q99466 2003 aa6.71□□□□□ -1.33
IGHV3-57-201ENST00000520143 TRAV19A0A0A6YYK7 116 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 A0A0D9SEW6 157 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 CXorf51AA0A1B0GTR3 108 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 MROH6A6NGR9 719 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 TPP1O14773 563 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 SLC7A4O43246 635 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 GREM1O60565 184 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 TSPAN3O60637 253 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 TGDSO95455 350 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 NDST3O95803 873 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 GLUD1P00367 558 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 C8AP07357 584 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 BPGMP07738 259 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 SERPINF2P08697 491 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 ATXN1LP0C7T5 689 aaKnown RBP6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 SPATA31D3P0C874 917 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 IRF1P10914 325 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 COL6A2P12110 1019 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 CR2P20023 1033 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 DDX6P26196 483 aaKnown RBP eCLIP6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 TYK2P29597 1187 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 CHRNA4P43681 627 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 MAXP61244 160 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 CDK18Q07002 472 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 THOC5Q13769 683 aaKnown RBP6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 PDE1CQ14123 709 aaPredicted RBP6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 IHHQ14623 411 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 ZKSCAN8Q15776 578 aaPredicted RBP6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 PCSK7Q16549 785 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 TUSC1Q2TAM9 212 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 INO80DQ53TQ3 878 aaPredicted RBP6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 RALGPS1Q5JS13 557 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 SIRPB2Q5JXA9 342 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 MPP7Q5T2T1 576 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 FYB2Q5VWT5 728 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 RNF219Q5W0B1 726 aaPredicted RBP6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 ATG16L1Q676U5 607 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 TXNDC8Q6A555 127 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 FSTL4Q6MZW2 842 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 CXorf57Q6NSI4 855 aaKnown RBP6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 CGB2Q6NT52 195 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 ESRP1Q6NXG1 681 aaKnown RBP6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 CDHR3Q6ZTQ4 885 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 SPATA31D4Q6ZUB0 917 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 FAM47EQ6ZV65 393 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 HTR3DQ70Z44 454 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 GALNT7Q86SF2 657 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 NUDCD3Q8IVD9 361 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 DCLK2Q8N568 766 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 SLC25A41Q8N5S1 370 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 ARL14EPQ8N8R7 260 aaPredicted RBP6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 GBP7Q8N8V2 638 aaPredicted RBP6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 MRPL43Q8N983 215 aaKnown RBP6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 ARMC2Q8NEN0 867 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 CALML6Q8TD86 181 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 CCT6BQ92526 530 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 WBP2Q969T9 261 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 IFT43Q96FT9 208 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 ZNF778Q96MU6 729 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 SLC22A12Q96S37 553 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 AGAP2Q99490 1192 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 GPR22Q99680 433 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 FAM167BQ9BTA0 163 aa6.71□□□□□ -1.34
IGHV3-57-201ENST00000520143 SPON2Q9BUD6 331 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms