RNA–Protein interactions for RNA: ENST00000519712.1

NSMCE2-207, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-207ENST00000519712 TRIM7Q9C029 511 aa11.4□□□□□ -0.58
NSMCE2-207ENST00000519712 CBX8Q9HC52 389 aa11.4□□□□□ -0.58
NSMCE2-207ENST00000519712 GPATCH2LQ9NWQ4 482 aa11.4□□□□□ -0.58
NSMCE2-207ENST00000519712 UBA2Q9UBT2 640 aaPredicted RBP11.4□□□□□ -0.58
NSMCE2-207ENST00000519712 CNOT8Q9UFF9 292 aaKnown RBP11.4□□□□□ -0.58
NSMCE2-207ENST00000519712 ITM2BQ9Y287 266 aa11.4□□□□□ -0.58
NSMCE2-207ENST00000519712 ANKRD36A6QL64 1941 aa11.4□□□□□ -0.58
NSMCE2-207ENST00000519712 MYLKQ15746 1914 aa11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 SYCE3A1L190 88 aa11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 IGLON5A6NGN9 336 aa11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 GOLGA8CPA6NN73 597 aa11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 EEF2KO00418 725 aaKnown RBP11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 TRIM38O00635 465 aa11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 TOR1BO14657 336 aa11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 RIOK3O14730 519 aaKnown RBP11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 SDC3O75056 442 aa11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 RNF8O76064 485 aa11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 PAK4O96013 591 aaPredicted RBP11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 SERPINC1P01008 464 aa11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 NME1P15531 152 aaKnown RBP11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 RABIFP47224 123 aa11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 CSNK1DP48730 415 aa11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 FANCCQ00597 558 aa11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 RAD51Q06609 339 aa11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 DPYSQ14117 519 aa11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 FZD2Q14332 565 aa11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 DPYSL2Q16555 572 aa11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 Q6ZSR6 202 aa11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 PTAR1Q7Z6K3 402 aaPredicted RBP11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 LUZP1Q86V48 1076 aa11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 PARGQ86W56 976 aa11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 RYBPQ8N488 228 aaPredicted RBP11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 NPWQ8N729 165 aa11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 CENPTQ96BT3 561 aa11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 TUBGCP5Q96RT8 1024 aa11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 NCAPGQ9BPX3 1015 aa11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 CALN1Q9BXU9 219 aa11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 SLC39A8Q9C0K1 460 aa11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 DHX35Q9H5Z1 703 aaKnown RBP11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 CCDC86Q9H6F5 360 aaKnown RBP11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 UCKL1Q9NWZ5 548 aa11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 NLGN3Q9NZ94 848 aa11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 LAMA5O15230 3695 aa11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 LRP4O75096 1905 aa11.39□□□□□ -0.59
NSMCE2-207ENST00000519712 COL27A1Q8IZC6 1860 aaPredicted RBP11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 URB1O60287 2271 aaKnown RBP11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 LY6G6EA0A0G2JKS1 128 aa11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 ARHGAP42A6NI28 874 aa11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 J3KR12 359 aa11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 FPGTO14772 594 aa11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 SIGLEC6O43699 453 aa11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 PRPSAP2O60256 369 aa11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 CSF2P04141 144 aa11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 SKILP12757 684 aa11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 TIMP2P16035 220 aa11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 ERCC2P18074 760 aa11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 IGFALSP35858 605 aa11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 HNRNPKP61978 463 aaKnown RBP eCLIP11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 ELP6Q0PNE2 266 aa11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 SGCGQ13326 291 aa11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 AGERQ15109 404 aa11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 TMEM52BQ4KMG9 183 aa11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 TPRG1LQ5T0D9 272 aa11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 ZNF354CQ86Y25 554 aa11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 NIPA2Q8N8Q9 360 aa11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 FAM181AQ8N9Y4 354 aa11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 TP53I13Q8NBR0 393 aaPredicted RBP11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 TBATAQ96M53 351 aa11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 ZNF641Q96N77 438 aaPredicted RBP11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 MRPL47Q9HD33 250 aaKnown RBP11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 NENFQ9UMX5 172 aa11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 BZW2Q9Y6E2 419 aaKnown RBP11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 CSNK1G3Q9Y6M4 447 aa11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 U3KQA8 63 aa11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 DSPP15924 2871 aaKnown RBP11.38□□□□□ -0.59
NSMCE2-207ENST00000519712 CELSR3Q9NYQ7 3312 aa11.37□□□□□ -0.59
NSMCE2-207ENST00000519712 CACNA1GO43497 2377 aa11.37□□□□□ -0.59
NSMCE2-207ENST00000519712 FAM149AA5PLN7 773 aa11.37□□□□□ -0.59
NSMCE2-207ENST00000519712 TRABD2BA6NFA1 517 aa11.37□□□□□ -0.59
NSMCE2-207ENST00000519712 SCAMP1O15126 338 aa11.37□□□□□ -0.59
NSMCE2-207ENST00000519712 INSIG1O15503 277 aa11.37□□□□□ -0.59
NSMCE2-207ENST00000519712 LZTS3O60299 673 aaPredicted RBP11.37□□□□□ -0.59
NSMCE2-207ENST00000519712 PIGNO95427 931 aa11.37□□□□□ -0.59
NSMCE2-207ENST00000519712 CKMT1AP12532 417 aa11.37□□□□□ -0.59
NSMCE2-207ENST00000519712 IL1R2P27930 398 aa11.37□□□□□ -0.59
NSMCE2-207ENST00000519712 HNF1BP35680 557 aa11.37□□□□□ -0.59
NSMCE2-207ENST00000519712 PAPOLAP51003 745 aaKnown RBP11.37□□□□□ -0.59
NSMCE2-207ENST00000519712 YPEL5P62699 121 aa11.37□□□□□ -0.59
NSMCE2-207ENST00000519712 ZBED6P86452 979 aa11.37□□□□□ -0.59
NSMCE2-207ENST00000519712 PDE1CQ14123 709 aaPredicted RBP11.37□□□□□ -0.59
NSMCE2-207ENST00000519712 RFTN1Q14699 578 aaPredicted RBP11.37□□□□□ -0.59
NSMCE2-207ENST00000519712 HES3Q5TGS1 186 aa11.37□□□□□ -0.59
NSMCE2-207ENST00000519712 BRAT1Q6PJG6 821 aa11.37□□□□□ -0.59
NSMCE2-207ENST00000519712 TTC7BQ86TV6 843 aa11.37□□□□□ -0.59
NSMCE2-207ENST00000519712 ZSWIM9Q86XI8 627 aa11.37□□□□□ -0.59
NSMCE2-207ENST00000519712 MARCH9Q86YJ5 346 aa11.37□□□□□ -0.59
NSMCE2-207ENST00000519712 LZTR1Q8N653 840 aa11.37□□□□□ -0.59
NSMCE2-207ENST00000519712 NETO2Q8NC67 525 aa11.37□□□□□ -0.59
NSMCE2-207ENST00000519712 ZNF548Q8NEK5 533 aaPredicted RBP11.37□□□□□ -0.59
NSMCE2-207ENST00000519712 MDM1Q8TC05 714 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms