RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 ZNF556Q9HAH1 456 aa2.05□□□□□ -2.08
CCNC-208ENST00000519617 SAP30LQ9HAJ7 183 aa2.05□□□□□ -2.08
CCNC-208ENST00000519617 LY9Q9HBG7 655 aa2.05□□□□□ -2.08
CCNC-208ENST00000519617 NMRK2Q9NPI5 230 aa2.05□□□□□ -2.08
CCNC-208ENST00000519617 DDX4Q9NQI0 724 aaKnown RBP2.05□□□□□ -2.08
CCNC-208ENST00000519617 PLSCR4Q9NRQ2 329 aa2.05□□□□□ -2.08
CCNC-208ENST00000519617 SAGE1Q9NXZ1 904 aa2.05□□□□□ -2.08
CCNC-208ENST00000519617 NCKIPSDQ9NZQ3 722 aa2.05□□□□□ -2.08
CCNC-208ENST00000519617 ADD3Q9UEY8 706 aaKnown RBP2.05□□□□□ -2.08
CCNC-208ENST00000519617 VPS51Q9UID3 782 aa2.05□□□□□ -2.08
CCNC-208ENST00000519617 HOOK1Q9UJC3 728 aaKnown RBP2.05□□□□□ -2.08
CCNC-208ENST00000519617 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.05□□□□□ -2.08
CCNC-208ENST00000519617 NEDD4P46934 1319 aa2.05□□□□□ -2.08
CCNC-208ENST00000519617 STK36Q9NRP7 1315 aa2.05□□□□□ -2.08
CCNC-208ENST00000519617 CNTNAP1P78357 1384 aa2.05□□□□□ -2.08
CCNC-208ENST00000519617 LAMB1P07942 1786 aa2.05□□□□□ -2.08
CCNC-208ENST00000519617 NAV1Q8NEY1 1877 aa2.05□□□□□ -2.08
CCNC-208ENST00000519617 MYH8P13535 1937 aa2.05□□□□□ -2.08
CCNC-208ENST00000519617 SCN9AQ15858 1988 aa2.05□□□□□ -2.08
CCNC-208ENST00000519617 IGKV6D-41A0A0C4DH26 115 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 ESYT2A0FGR8 921 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 SERINC4A6NH21 518 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 A6NNC1 897 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 PDHXO00330 501 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 LAD1O00515 517 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 PRYO14603 147 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 ATP2A1O14983 1001 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 DKC1O60832 514 aaKnown RBP eCLIP2.04□□□□□ -2.081e-5■□□□□ 10.7
CCNC-208ENST00000519617 LDB3O75112 727 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 NDUFB10O96000 172 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 CGAP01215 116 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 ICAM1P05362 532 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 POLR2MP0CAP2 368 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 PF4V1P10720 104 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 PDHBP11177 359 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 SCG2P13521 617 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 PKMP14618 531 aaKnown RBP2.04□□□□□ -2.08
CCNC-208ENST00000519617 GCFC2P16383 781 aaKnown RBP2.04□□□□□ -2.08
CCNC-208ENST00000519617 HSPA6P17066 643 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 RHCEP18577 417 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 ACVR2AP27037 513 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 DUSP1P28562 367 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 RBL1P28749 1068 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 PDIA3P30101 505 aaKnown RBP2.04□□□□□ -2.08
CCNC-208ENST00000519617 SLC7A1P30825 629 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 HTR7P34969 479 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 KRT2P35908 639 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 TM4SF4P48230 202 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 TRAPPC10P48553 1259 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 CPT1AP50416 773 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 ZNF84P51523 738 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 PRELPP51888 382 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 HMGCS2P54868 508 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 NAPAP54920 295 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 C1QTNF8P60827 252 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 RAE1P78406 368 aaKnown RBP2.04□□□□□ -2.08
CCNC-208ENST00000519617 SETQ01105 290 aaPredicted RBP2.04□□□□□ -2.08
CCNC-208ENST00000519617 ZNF543Q08ER8 600 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 TROAPQ12815 778 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 NID2Q14112 1375 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 GOLGB1Q14789 3259 aaKnown RBP2.04□□□□□ -2.08
CCNC-208ENST00000519617 NONOQ15233 471 aaKnown RBP eCLIP2.04□□□□□ -2.08
CCNC-208ENST00000519617 ZRSR1Q15695 479 aaKnown RBP2.04□□□□□ -2.08
CCNC-208ENST00000519617 PKN2Q16513 984 aaKnown RBP2.04□□□□□ -2.08
CCNC-208ENST00000519617 CDC37Q16543 378 aaPredicted RBP2.04□□□□□ -2.08
CCNC-208ENST00000519617 TMEM266Q2M3C6 531 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 KRTAP24-1Q3LI83 254 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 ADCK5Q3MIX3 580 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 ANO6Q4KMQ2 910 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 RILPL1Q5EBL4 403 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 WASHC2DQ5SRD0 308 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 C6orf10Q5SRN2 563 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 FAM83BQ5T0W9 1011 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 OTUD3Q5T2D3 398 aaPredicted RBP2.04□□□□□ -2.08
CCNC-208ENST00000519617 ASPHD1Q5U4P2 390 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 WDR78Q5VTH9 848 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 FOCADQ5VW36 1801 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 ISM2Q6H9L7 571 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 SWSAP1Q6NVH7 229 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 MZT2AQ6P582 158 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 SRCAPQ6ZRS2 3230 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 FAM43BQ6ZT52 329 aaPredicted RBP2.04□□□□□ -2.08
CCNC-208ENST00000519617 TMTC3Q6ZXV5 915 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 CHST3Q7LGC8 479 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 DPP9Q86TI2 863 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 ZBTB46Q86UZ6 589 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 CCDC83Q8IWF9 413 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 ERMNQ8TAM6 284 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 TMEM174Q8WUU8 243 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 KAT2BQ92831 832 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 INPP5DQ92835 1189 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 ZKSCAN4Q969J2 545 aaPredicted RBP2.04□□□□□ -2.08
CCNC-208ENST00000519617 SYAP1Q96A49 352 aaPredicted RBP2.04□□□□□ -2.08
CCNC-208ENST00000519617 CAPNS2Q96L46 248 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 PASKQ96RG2 1323 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 IWS1Q96ST2 819 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 TTLL2Q9BWV7 592 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 SEZ6LQ9BYH1 1024 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 LRRC27Q9C0I9 530 aa2.04□□□□□ -2.08
CCNC-208ENST00000519617 C6orf106Q9H6K1 298 aaPredicted RBP2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms