RNA–Protein interactions for RNA: ENST00000519221.5

MCPH1-202, Transcript of microcephalin 1, humanhuman

TSL 3

Gene MCPH1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-202ENST00000519221 RARAP10276 462 aa12.88□□□□□ -0.35
MCPH1-202ENST00000519221 IL1R2P27930 398 aa12.88□□□□□ -0.35
MCPH1-202ENST00000519221 RENBPP51606 427 aa12.88□□□□□ -0.35
MCPH1-202ENST00000519221 NSUN2Q08J23 767 aaKnown RBP eCLIP12.88□□□□□ -0.35
MCPH1-202ENST00000519221 ELP6Q0PNE2 266 aa12.88□□□□□ -0.35
MCPH1-202ENST00000519221 MAPK8IP2Q13387 824 aaPredicted RBP12.88□□□□□ -0.35
MCPH1-202ENST00000519221 FGL2Q14314 439 aa12.88□□□□□ -0.35
MCPH1-202ENST00000519221 SLC18A3Q16572 532 aa12.88□□□□□ -0.35
MCPH1-202ENST00000519221 TSR1Q2NL82 804 aaKnown RBP12.88□□□□□ -0.35
MCPH1-202ENST00000519221 BRAT1Q6PJG6 821 aa12.88□□□□□ -0.35
MCPH1-202ENST00000519221 KANSL1Q7Z3B3 1105 aa12.88□□□□□ -0.35
MCPH1-202ENST00000519221 POLNQ7Z5Q5 900 aa12.88□□□□□ -0.35
MCPH1-202ENST00000519221 TTC7BQ86TV6 843 aa12.88□□□□□ -0.35
MCPH1-202ENST00000519221 GATAD2AQ86YP4 633 aa12.88□□□□□ -0.35
MCPH1-202ENST00000519221 OR13H1Q8NG92 308 aa12.88□□□□□ -0.35
MCPH1-202ENST00000519221 C1QTNF7Q9BXJ2 289 aa12.88□□□□□ -0.35
MCPH1-202ENST00000519221 SP110Q9HB58 689 aa12.88□□□□□ -0.35
MCPH1-202ENST00000519221 GPR27Q9NS67 375 aa12.88□□□□□ -0.35
MCPH1-202ENST00000519221 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.88□□□□□ -0.35
MCPH1-202ENST00000519221 ZNHIT6Q9NWK9 470 aaKnown RBP12.88□□□□□ -0.35
MCPH1-202ENST00000519221 RCOR3Q9P2K3 495 aaPredicted RBP12.88□□□□□ -0.35
MCPH1-202ENST00000519221 UVRAGQ9P2Y5 699 aa12.88□□□□□ -0.35
MCPH1-202ENST00000519221 IPO11Q9UI26 975 aaKnown RBP12.88□□□□□ -0.35
MCPH1-202ENST00000519221 KLK13Q9UKR3 277 aa12.88□□□□□ -0.35
MCPH1-202ENST00000519221 CA5BQ9Y2D0 317 aa12.88□□□□□ -0.35
MCPH1-202ENST00000519221 PCDHGA1Q9Y5H4 931 aa12.88□□□□□ -0.35
MCPH1-202ENST00000519221 ASXL3Q9C0F0 2248 aa12.88□□□□□ -0.35
MCPH1-202ENST00000519221 MYLKQ15746 1914 aa12.88□□□□□ -0.35
MCPH1-202ENST00000519221 IGLON5A6NGN9 336 aa12.87□□□□□ -0.35
MCPH1-202ENST00000519221 DFFAO00273 331 aa12.87□□□□□ -0.35
MCPH1-202ENST00000519221 TOR1BO14657 336 aa12.87□□□□□ -0.35
MCPH1-202ENST00000519221 ENC1O14682 589 aa12.87□□□□□ -0.35
MCPH1-202ENST00000519221 FPGTO14772 594 aa12.87□□□□□ -0.35
MCPH1-202ENST00000519221 SPINT1O43278 529 aa12.87□□□□□ -0.35
MCPH1-202ENST00000519221 LDOC1O95751 146 aaPredicted RBP12.87□□□□□ -0.35
MCPH1-202ENST00000519221 PAK4O96013 591 aaPredicted RBP12.87□□□□□ -0.35
MCPH1-202ENST00000519221 C1SP09871 688 aa12.87□□□□□ -0.35
MCPH1-202ENST00000519221 H2AFZP0C0S5 128 aa12.87□□□□□ -0.35
MCPH1-202ENST00000519221 XPAP23025 273 aaPredicted RBP12.87□□□□□ -0.35
MCPH1-202ENST00000519221 SERPINB6P35237 376 aa12.87□□□□□ -0.35
MCPH1-202ENST00000519221 EIF4A3P38919 411 aaKnown RBP12.87□□□□□ -0.35
MCPH1-202ENST00000519221 RABIFP47224 123 aa12.87□□□□□ -0.35
MCPH1-202ENST00000519221 SLC25A11Q02978 314 aaKnown RBP12.87□□□□□ -0.35
MCPH1-202ENST00000519221 BNIP3Q12983 259 aa12.87□□□□□ -0.35
MCPH1-202ENST00000519221 HADHQ16836 314 aaKnown RBP12.87□□□□□ -0.35
MCPH1-202ENST00000519221 SMTNL2Q2TAL5 461 aa12.87□□□□□ -0.35
MCPH1-202ENST00000519221 TMCO3Q6UWJ1 677 aa12.87□□□□□ -0.35
MCPH1-202ENST00000519221 Q6ZSR6 202 aa12.87□□□□□ -0.35
MCPH1-202ENST00000519221 H2AFVQ71UI9 128 aa12.87□□□□□ -0.35
MCPH1-202ENST00000519221 VSTM4Q8IW00 320 aa12.87□□□□□ -0.35
MCPH1-202ENST00000519221 GALNT15Q8N3T1 639 aa12.87□□□□□ -0.35
MCPH1-202ENST00000519221 NPWQ8N729 165 aa12.87□□□□□ -0.35
MCPH1-202ENST00000519221 PNPLA1Q8N8W4 532 aa12.87□□□□□ -0.35
MCPH1-202ENST00000519221 KDF1Q8NAX2 398 aaPredicted RBP12.87□□□□□ -0.35
MCPH1-202ENST00000519221 CTNNBL1Q8WYA6 563 aaPredicted RBP12.87□□□□□ -0.35
MCPH1-202ENST00000519221 BMFQ96LC9 184 aa12.87□□□□□ -0.35
MCPH1-202ENST00000519221 CSPG4P5Q96PW8 444 aa12.87□□□□□ -0.35
MCPH1-202ENST00000519221 PSKH2Q96QS6 385 aa12.87□□□□□ -0.35
MCPH1-202ENST00000519221 KLF6Q99612 283 aaPredicted RBP12.87□□□□□ -0.35
MCPH1-202ENST00000519221 MYOCQ99972 504 aa12.87□□□□□ -0.35
MCPH1-202ENST00000519221 CINPQ9BW66 212 aaPredicted RBP12.87□□□□□ -0.35
MCPH1-202ENST00000519221 CALN1Q9BXU9 219 aa12.87□□□□□ -0.35
MCPH1-202ENST00000519221 SUV39H2Q9H5I1 410 aa12.87□□□□□ -0.35
MCPH1-202ENST00000519221 ATP13A3Q9H7F0 1226 aa12.87□□□□□ -0.35
MCPH1-202ENST00000519221 PCDH18Q9HCL0 1135 aa12.87□□□□□ -0.35
MCPH1-202ENST00000519221 FZD3Q9NPG1 666 aa12.87□□□□□ -0.35
MCPH1-202ENST00000519221 SEPT3Q9UH03 358 aa12.87□□□□□ -0.35
MCPH1-202ENST00000519221 ZFHX4Q86UP3 3567 aa12.86□□□□□ -0.35
MCPH1-202ENST00000519221 POM121BA6NF01 834 aa12.86□□□□□ -0.35
MCPH1-202ENST00000519221 C1QTNF9BB2RNN3 333 aa12.86□□□□□ -0.35
MCPH1-202ENST00000519221 TM7SF2O76062 418 aa12.86□□□□□ -0.35
MCPH1-202ENST00000519221 C1QTNF9P0C862 333 aa12.86□□□□□ -0.35
MCPH1-202ENST00000519221 TCF4P15884 667 aa12.86□□□□□ -0.35
MCPH1-202ENST00000519221 TIMP2P16035 220 aa12.86□□□□□ -0.35
MCPH1-202ENST00000519221 AMPD1P23109 780 aa12.86□□□□□ -0.35
MCPH1-202ENST00000519221 SERPINA4P29622 427 aa12.86□□□□□ -0.35
MCPH1-202ENST00000519221 HSPA9P38646 679 aaKnown RBP12.86□□□□□ -0.35
MCPH1-202ENST00000519221 CLDN2P57739 230 aa12.86□□□□□ -0.35
MCPH1-202ENST00000519221 HNRNPKP61978 463 aaKnown RBP eCLIP12.86□□□□□ -0.354e-6■■■■□ 24.6
MCPH1-202ENST00000519221 ASTE1Q2TB18 679 aaPredicted RBP12.86□□□□□ -0.35
MCPH1-202ENST00000519221 TMEM52BQ4KMG9 183 aa12.86□□□□□ -0.35
MCPH1-202ENST00000519221 CFAP58Q5T655 872 aa12.86□□□□□ -0.35
MCPH1-202ENST00000519221 CCNI2Q6ZMN8 369 aaPredicted RBP12.86□□□□□ -0.35
MCPH1-202ENST00000519221 TMPRSS7Q7RTY8 843 aa12.86□□□□□ -0.35
MCPH1-202ENST00000519221 PTAR1Q7Z6K3 402 aaPredicted RBP12.86□□□□□ -0.35
MCPH1-202ENST00000519221 SRLQ86TD4 932 aa12.86□□□□□ -0.35
MCPH1-202ENST00000519221 LRRC49Q8IUZ0 686 aa12.86□□□□□ -0.35
MCPH1-202ENST00000519221 SLC22A18ASQ8N1D0 253 aa12.86□□□□□ -0.35
MCPH1-202ENST00000519221 EID2Q8N6I1 236 aa12.86□□□□□ -0.35
MCPH1-202ENST00000519221 TSEN2Q8NCE0 465 aaKnown RBP12.86□□□□□ -0.35
MCPH1-202ENST00000519221 ZNF564Q8TBZ8 553 aaPredicted RBP12.86□□□□□ -0.35
MCPH1-202ENST00000519221 FAM71BQ8TC56 605 aa12.86□□□□□ -0.35
MCPH1-202ENST00000519221 CXorf40AQ8TE69 158 aa12.86□□□□□ -0.35
MCPH1-202ENST00000519221 TSC1Q92574 1164 aa12.86□□□□□ -0.35
MCPH1-202ENST00000519221 HSPH1Q92598 858 aa12.86□□□□□ -0.35
MCPH1-202ENST00000519221 EXOC2Q96KP1 924 aa12.86□□□□□ -0.35
MCPH1-202ENST00000519221 CNDP2Q96KP4 475 aaKnown RBP12.86□□□□□ -0.35
MCPH1-202ENST00000519221 DEF6Q9H4E7 631 aa12.86□□□□□ -0.35
MCPH1-202ENST00000519221 CTTNBP2NLQ9P2B4 639 aa12.86□□□□□ -0.35
MCPH1-202ENST00000519221 GGT7Q9UJ14 662 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms