RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 PIGZQ86VD9 579 aa6.2□□□□□ -1.42
PABPC1-207ENST00000518716 MMAAQ8IVH4 418 aaKnown RBP6.2□□□□□ -1.42
PABPC1-207ENST00000518716 ARHGAP18Q8N392 663 aa6.2□□□□□ -1.42
PABPC1-207ENST00000518716 TMEM145Q8NBT3 493 aa6.2□□□□□ -1.42
PABPC1-207ENST00000518716 FRS2Q8WU20 508 aa6.2□□□□□ -1.42
PABPC1-207ENST00000518716 PTPRN2Q92932 1015 aa6.2□□□□□ -1.42
PABPC1-207ENST00000518716 AZIN2Q96A70 460 aa6.2□□□□□ -1.42
PABPC1-207ENST00000518716 JAKMIP2Q96AA8 810 aa6.2□□□□□ -1.42
PABPC1-207ENST00000518716 GRAMD1AQ96CP6 724 aa6.2□□□□□ -1.42
PABPC1-207ENST00000518716 FAM210AQ96ND0 272 aa6.2□□□□□ -1.42
PABPC1-207ENST00000518716 DEPDC7Q96QD5 511 aa6.2□□□□□ -1.42
PABPC1-207ENST00000518716 C7orf25Q9BPX7 421 aa6.2□□□□□ -1.42
PABPC1-207ENST00000518716 NT5C1AQ9BXI3 368 aa6.2□□□□□ -1.42
PABPC1-207ENST00000518716 BACH2Q9BYV9 841 aa6.2□□□□□ -1.42
PABPC1-207ENST00000518716 PANK2Q9BZ23 570 aa6.2□□□□□ -1.42
PABPC1-207ENST00000518716 TRIM4Q9C037 500 aa6.2□□□□□ -1.42
PABPC1-207ENST00000518716 CYP3A43Q9HB55 503 aa6.2□□□□□ -1.42
PABPC1-207ENST00000518716 THSD1Q9NS62 852 aa6.2□□□□□ -1.42
PABPC1-207ENST00000518716 KLHL11Q9NVR0 708 aa6.2□□□□□ -1.42
PABPC1-207ENST00000518716 UCKL1Q9NWZ5 548 aa6.2□□□□□ -1.42
PABPC1-207ENST00000518716 SLAMF8Q9P0V8 285 aa6.2□□□□□ -1.42
PABPC1-207ENST00000518716 ANKMY1Q9P2S6 941 aa6.2□□□□□ -1.42
PABPC1-207ENST00000518716 CYTH4Q9UIA0 394 aa6.2□□□□□ -1.42
PABPC1-207ENST00000518716 SLCO3A1Q9UIG8 710 aa6.2□□□□□ -1.42
PABPC1-207ENST00000518716 MAPK8IP1Q9UQF2 711 aa6.2□□□□□ -1.42
PABPC1-207ENST00000518716 HBS1LQ9Y450 684 aaKnown RBP6.2□□□□□ -1.42
PABPC1-207ENST00000518716 ABCA12Q86UK0 2595 aa6.2□□□□□ -1.42
PABPC1-207ENST00000518716 UBE4BO95155 1302 aa6.2□□□□□ -1.42
PABPC1-207ENST00000518716 PMS2P1A4D2B8 440 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 GOLGA6L3A6NEY3 463 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 TTC34A8MYJ7 566 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 IKBKBO14920 756 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 SLC7A4O43246 635 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 SDC3O75056 442 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 RNASEH2AO75792 299 aaKnown RBP6.19□□□□□ -1.42
PABPC1-207ENST00000518716 PIAS2O75928 621 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 ZBED1O96006 694 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 AFPP02771 609 aaKnown RBP6.19□□□□□ -1.42
PABPC1-207ENST00000518716 ASLP04424 464 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 P4HA1P13674 534 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 RAC2P15153 192 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 POLR2EP19388 210 aaKnown RBP6.19□□□□□ -1.42
PABPC1-207ENST00000518716 C5AR1P21730 350 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 SLC6A4P31645 630 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 NUDT1P36639 197 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 CSKP41240 450 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 METAP1P53582 386 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 GYS2P54840 703 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 YWHAGP61981 247 aaKnown RBP eCLIP6.19□□□□□ -1.42
PABPC1-207ENST00000518716 NFATC3Q12968 1075 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 BIRC3Q13489 604 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 SLC39A14Q15043 492 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 KNOP1Q1ED39 458 aaKnown RBP6.19□□□□□ -1.42
PABPC1-207ENST00000518716 FSCBQ5H9T9 825 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 FAM26FQ5R3K3 315 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 ARHGAP17Q68EM7 881 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 NADSYN1Q6IA69 706 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 RFWD3Q6PCD5 774 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 TRIM69Q86WT6 500 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 SCML4Q8N228 414 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 ANKRD52Q8NB46 1076 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 NDRG1Q92597 394 aaKnown RBP6.19□□□□□ -1.42
PABPC1-207ENST00000518716 CCDC120Q96HB5 630 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 FRMD6Q96NE9 622 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 OMDQ99983 421 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.19□□□□□ -1.42
PABPC1-207ENST00000518716 USP29Q9HBJ7 922 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 GPR27Q9NS67 375 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 KLHL42Q9P2K6 505 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 SFMBT1Q9UHJ3 866 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 STRIP2Q9ULQ0 834 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 SATB2Q9UPW6 733 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 ERVW-1Q9UQF0 538 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 DMTF1Q9Y222 760 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 ENTPD2Q9Y5L3 495 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 SCINQ9Y6U3 715 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 DOPEY1Q5JWR5 2465 aa6.19□□□□□ -1.42
PABPC1-207ENST00000518716 CSMD1Q96PZ7 3565 aa6.18□□□□□ -1.42
PABPC1-207ENST00000518716 EDDM13A0A1B0GTR0 161 aa6.18□□□□□ -1.42
PABPC1-207ENST00000518716 GOLGA6L7A0A1B0GV03 622 aa6.18□□□□□ -1.42
PABPC1-207ENST00000518716 TMEM238LA0A1B0GVL6 79 aa6.18□□□□□ -1.42
PABPC1-207ENST00000518716 TLDC2A0PJX2 215 aa6.18□□□□□ -1.42
PABPC1-207ENST00000518716 YJEFN3A6XGL0 299 aa6.18□□□□□ -1.42
PABPC1-207ENST00000518716 E7ENQ6 273 aa6.18□□□□□ -1.42
PABPC1-207ENST00000518716 H3BS24 57 aa6.18□□□□□ -1.42
PABPC1-207ENST00000518716 TULP2O00295 520 aa6.18□□□□□ -1.42
PABPC1-207ENST00000518716 SCAMP1O15126 338 aa6.18□□□□□ -1.42
PABPC1-207ENST00000518716 IRAK2O43187 625 aa6.18□□□□□ -1.42
PABPC1-207ENST00000518716 PLRG1O43660 514 aaKnown RBP6.18□□□□□ -1.42
PABPC1-207ENST00000518716 EXOC3O60645 756 aa6.18□□□□□ -1.42
PABPC1-207ENST00000518716 MAGEC1O60732 1142 aa6.18□□□□□ -1.42
PABPC1-207ENST00000518716 RNASEH1O60930 286 aaKnown RBP6.18□□□□□ -1.42
PABPC1-207ENST00000518716 HLA-DRAP01903 254 aa6.18□□□□□ -1.42
PABPC1-207ENST00000518716 SRPRAP08240 638 aaKnown RBP6.18□□□□□ -1.42
PABPC1-207ENST00000518716 GP1BBP13224 206 aa6.18□□□□□ -1.42
PABPC1-207ENST00000518716 MYF5P13349 255 aa6.18□□□□□ -1.42
PABPC1-207ENST00000518716 TGM2P21980 687 aa6.18□□□□□ -1.42
PABPC1-207ENST00000518716 GSTT1P30711 240 aa6.18□□□□□ -1.42
PABPC1-207ENST00000518716 PDX1P52945 283 aa6.18□□□□□ -1.42
PABPC1-207ENST00000518716 RAD23BP54727 409 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms