RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 WNT9AO14904 365 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 AREL1O15033 823 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 VILLO15195 856 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 ARHGAP6O43182 974 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 MAP3K6O95382 1288 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 CCNB1P14635 433 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 MAT2AP31153 395 aaKnown RBP11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 CTNNA1P35221 906 aaKnown RBP11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 MMP13P45452 471 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 MAPK8P45983 427 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 GRIA4P48058 902 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 NR2C2P49116 596 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 PEX5P50542 639 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 SUOXP51687 545 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 COPS2P61201 443 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 RPS21P63220 83 aaKnown RBP11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 BNC1Q01954 994 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 BCL2L1Q07817 233 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 TFDP2Q14188 446 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 TEAD4Q15561 434 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 UGP2Q16851 508 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 TMEM259Q4ZIN3 620 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 TFDP3Q5H9I0 405 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 RALGPS1Q5JS13 557 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 BRAT1Q6PJG6 821 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 SPOCD1Q6ZMY3 1216 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 CCNYQ8ND76 341 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 CCDC112Q8NEF3 446 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 EXD1Q8NHP7 514 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 KRT35Q92764 455 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 HDAC11Q96DB2 347 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 SERAC1Q96JX3 654 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 NUDCD1Q96RS6 583 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 MGME1Q9BQP7 344 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 RTKNQ9BST9 563 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 EDEM2Q9BV94 578 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 C1QTNF2Q9BXJ5 285 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 SLC17A9Q9BYT1 436 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 ATP13A3Q9H7F0 1226 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 TMEM9BQ9NQ34 198 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 TRIM10Q9UDY6 481 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 AMACRQ9UHK6 382 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 CDV3Q9UKY7 258 aaKnown RBP11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 ANKRD6Q9Y2G4 727 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 HEY1Q9Y5J3 304 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 CEP250Q9BV73 2442 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 NYNRINQ9P2P1 1898 aaKnown RBP11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 A0A1B0GVT2 93 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 A0A1W2PR77 199 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 TSPAN11A1L157 253 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 TTC24A2A3L6 582 aaPredicted RBP11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 CCDC66A2RUB6 948 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 GRID2IPA4D2P6 1211 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 PRAMEF26H0Y7S4 382 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 SLC31A1O15431 190 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 HTRA2O43464 458 aaPredicted RBP11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 CST8O60676 142 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 GJB3O75712 270 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 PIGNO95427 931 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 PAK4O96013 591 aaPredicted RBP11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 WNT1P04628 370 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 KRT10P13645 584 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 ITIH2P19823 946 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 CES1P23141 567 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 CTNNA2P26232 953 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 CD38P28907 300 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 SERPINA4P29622 427 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 ABL2P42684 1182 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 ATXN3P54252 364 aaPredicted RBP11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 AP1S1P61966 158 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 POLR2LP62875 67 aaKnown RBP11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 ADCY2Q08462 1091 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 PPIDQ08752 370 aaKnown RBP11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 ZNF235Q14590 738 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 STAT4Q14765 748 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 PDK1Q15118 436 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 SETMARQ53H47 684 aaPredicted RBP11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 KIAA1161Q6NSJ0 714 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 IL27RAQ6UWB1 636 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 BZW1Q7L1Q6 419 aaKnown RBP11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 NT5DC3Q86UY8 548 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 ZSCAN30Q86W11 494 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 RFX6Q8HWS3 928 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 MFSD2AQ8NA29 543 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 LRRN4Q8WUT4 740 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 UBE2Q2Q8WVN8 375 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 ASB12Q8WXK4 309 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 SPOCK2Q92563 424 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 SKA1Q96BD8 255 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 ECHDC3Q96DC8 303 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 LENG8Q96PV6 779 aaPredicted RBP11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 LGMNQ99538 433 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 GTPBP2Q9BX10 602 aaKnown RBP11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 BRD8Q9H0E9 1235 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 NOD2Q9HC29 1040 aa11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 DNAAF2Q9NVR5 837 aaKnown RBP11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 RBM22Q9NW64 420 aaKnown RBP eCLIP11.26□□□□□ -0.61
SCARNA20-201ENST00000516768 EFR3BQ9Y2G0 817 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 545.2 ms