RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 HSPB6O14558 160 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 RGS10O43665 173 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 SLCO2B1O94956 709 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 RASAL1O95294 804 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 VNN2O95498 520 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 NADKO95544 446 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 C22orf31O95567 290 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 HOXD4P09016 255 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 AGXTP21549 392 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 MATN1P21941 496 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 AARSP49588 968 aaKnown RBP eCLIP-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 EPHB1P54762 984 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 TAS2R38P59533 333 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 ECT2LQ008S8 904 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 ELF2Q15723 593 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 KIAA1644Q3SXP7 199 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 PAPPA-AS1Q5QFB9 102 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 GLDNQ6ZMI3 551 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 C11orf96Q7Z7L8 435 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 SLC20A1Q8WUM9 679 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 TOMM40LQ969M1 308 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 DHX58Q96C10 678 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 FAM122AQ96E09 287 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 ZNF333Q96JL9 665 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 ZNF577Q9BSK1 485 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 MSTO1Q9BUK6 570 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 RSPO3Q9BXY4 272 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 PANK2Q9BZ23 570 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 FRMD8Q9BZ67 464 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 SLC39A8Q9C0K1 460 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 TGIF2Q9GZN2 237 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 UPF3AQ9H1J1 476 aaKnown RBP-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 WDCPQ9H6R7 721 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 MAGEE1Q9HCI5 957 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 VTA1Q9NP79 307 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 ZNF277Q9NRM2 450 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 TMEM51Q9NW97 253 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 ABCF2Q9UG63 623 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 GPR45Q9Y5Y3 372 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 KIF26AQ9ULI4 1882 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 A0A087WWV3 80 aa-0.79□□□□□ -2.54
RNU6-539P-201ENST00000516665 PANO1I0J062 215 aa-0.79□□□□□ -2.54
RNU6-539P-201ENST00000516665 PHF1O43189 567 aaPredicted RBP-0.79□□□□□ -2.54
RNU6-539P-201ENST00000516665 RASA4O43374 803 aa-0.79□□□□□ -2.54
RNU6-539P-201ENST00000516665 KAT7O95251 611 aa-0.79□□□□□ -2.54
RNU6-539P-201ENST00000516665 TSHBP01222 138 aa-0.79□□□□□ -2.54
RNU6-539P-201ENST00000516665 FAM157CP0CG43 387 aa-0.79□□□□□ -2.54
RNU6-539P-201ENST00000516665 CHRNA3P32297 505 aa-0.79□□□□□ -2.54
RNU6-539P-201ENST00000516665 IGHMBP2P38935 993 aaKnown RBP-0.79□□□□□ -2.54
RNU6-539P-201ENST00000516665 EFNA5P52803 228 aa-0.79□□□□□ -2.54
RNU6-539P-201ENST00000516665 SESN3P58005 492 aa-0.79□□□□□ -2.54
RNU6-539P-201ENST00000516665 SH2D5Q6ZV89 423 aa-0.79□□□□□ -2.54
RNU6-539P-201ENST00000516665 C14orf80Q86SX3 495 aa-0.79□□□□□ -2.54
RNU6-539P-201ENST00000516665 VASH2Q86V25 355 aa-0.79□□□□□ -2.54
RNU6-539P-201ENST00000516665 VPS37DQ86XT2 251 aa-0.79□□□□□ -2.54
RNU6-539P-201ENST00000516665 SLC15A4Q8N697 577 aa-0.79□□□□□ -2.54
RNU6-539P-201ENST00000516665 ZNF611Q8N823 705 aa-0.79□□□□□ -2.54
RNU6-539P-201ENST00000516665 CREB3L4Q8TEY5 395 aa-0.79□□□□□ -2.54
RNU6-539P-201ENST00000516665 TMEM18Q96B42 140 aa-0.79□□□□□ -2.54
RNU6-539P-201ENST00000516665 NPAS1Q99742 590 aa-0.79□□□□□ -2.54
RNU6-539P-201ENST00000516665 POLR3CQ9BUI4 534 aaPredicted RBP-0.79□□□□□ -2.54
RNU6-539P-201ENST00000516665 MS4A7Q9GZW8 240 aaPredicted RBP-0.79□□□□□ -2.54
RNU6-539P-201ENST00000516665 BICC1Q9H694 974 aaKnown RBP-0.79□□□□□ -2.54
RNU6-539P-201ENST00000516665 ZDHHC7Q9NXF8 308 aa-0.79□□□□□ -2.54
RNU6-539P-201ENST00000516665 C1RLQ9NZP8 487 aa-0.79□□□□□ -2.54
RNU6-539P-201ENST00000516665 ADAM22Q9P0K1 906 aa-0.79□□□□□ -2.54
RNU6-539P-201ENST00000516665 MAGEC2Q9UBF1 373 aaPredicted RBP-0.79□□□□□ -2.54
RNU6-539P-201ENST00000516665 SAP30BPQ9UHR5 308 aaKnown RBP-0.79□□□□□ -2.54
RNU6-539P-201ENST00000516665 TNFSF13BQ9Y275 285 aa-0.79□□□□□ -2.54
RNU6-539P-201ENST00000516665 SYNE1Q8NF91 8797 aaKnown RBP-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 MUC12Q9UKN1 5478 aa-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 FAM168BA1KXE4 195 aa-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 NDUFS7O75251 213 aa-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 LRCH4O75427 683 aa-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 IL18RAPO95256 599 aa-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 CAVIN2O95810 425 aa-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 IGLV3-19P01714 112 aa-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 IGHV4-39P01824 125 aa-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 PRB1P04280 392 aa-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 MMP2P08253 660 aa-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 CKMT1AP12532 417 aa-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 ERCC3P19447 782 aa-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 KLRC2P26717 231 aa-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 ITGA8P53708 1063 aa-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 LRRC63Q05C16 580 aa-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 CLCA4Q14CN2 919 aa-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 SGSM1Q2NKQ1 1148 aa-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 PPP4R3AQ6IN85 833 aa-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 IRGCQ6NXR0 463 aa-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 CCDC129Q6ZRS4 1044 aa-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 HEATR3Q7Z4Q2 680 aa-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 IGFN1Q86VF2 1251 aa-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 KMT5CQ86Y97 462 aa-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 C3orf20Q8ND61 904 aa-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 ABCF1Q8NE71 845 aaKnown RBP eCLIP-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 SCRN2Q96FV2 425 aa-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 DDX23Q9BUQ8 820 aaKnown RBP-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 STK33Q9BYT3 514 aa-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 ACTR5Q9H9F9 607 aaPredicted RBP-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 KRT84Q9NSB2 600 aa-0.8□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms