RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 APLFQ8IW19 511 aaPredicted RBP14.99□□□□□ -0.01
NUP54-217ENST00000514987 CEP97Q8IW35 865 aa14.99□□□□□ -0.01
NUP54-217ENST00000514987 ABI1Q8IZP0 508 aa14.99□□□□□ -0.01
NUP54-217ENST00000514987 TADA1Q96BN2 335 aa14.99□□□□□ -0.01
NUP54-217ENST00000514987 NXNL1Q96CM4 212 aa14.99□□□□□ -0.01
NUP54-217ENST00000514987 CEP295NLQ96MC4 621 aa14.99□□□□□ -0.01
NUP54-217ENST00000514987 CDK5RAP1Q96SZ6 601 aaKnown RBP14.99□□□□□ -0.01
NUP54-217ENST00000514987 PPP1R12CQ9BZL4 782 aa14.99□□□□□ -0.01
NUP54-217ENST00000514987 MARCH2Q9P0N8 246 aa14.99□□□□□ -0.01
NUP54-217ENST00000514987 XPR1Q9UBH6 696 aa14.99□□□□□ -0.01
NUP54-217ENST00000514987 SLC2A6Q9UGQ3 507 aa14.99□□□□□ -0.01
NUP54-217ENST00000514987 PRPF19Q9UMS4 504 aaKnown RBP14.99□□□□□ -0.01
NUP54-217ENST00000514987 CDYLQ9Y232 598 aa14.99□□□□□ -0.01
NUP54-217ENST00000514987 PRG3Q9Y2Y8 225 aaPredicted RBP14.99□□□□□ -0.01
NUP54-217ENST00000514987 RGSL1A5PLK6 1076 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 H7C4K7 107 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 DLX3O60479 287 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 RAMP2O60895 175 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 ELNP15502 786 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 MPSTP25325 297 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 AVPR1AP37288 418 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 PBX3P40426 434 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 PCSK7Q16549 785 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 SH2D4BQ5SQS7 431 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 C16orf89Q6UX73 402 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 POU5F2Q8N7G0 328 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 SLC43A3Q8NBI5 491 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 RP9Q8TA86 221 aaKnown RBP14.98□□□□□ -0.01
NUP54-217ENST00000514987 LINC01599Q8WXQ3 324 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 ZNF599Q96NL3 588 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 SERPINI1Q99574 410 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 OMDQ99983 421 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 SEZ6LQ9BYH1 1024 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 VCX3BQ9H321 246 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 MFSD1Q9H3U5 465 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 EML4Q9HC35 981 aaKnown RBP14.98□□□□□ -0.01
NUP54-217ENST00000514987 TRPC7Q9HCX4 862 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 CORO1CQ9ULV4 474 aaPredicted RBP14.98□□□□□ -0.01
NUP54-217ENST00000514987 ABT1Q9ULW3 272 aaKnown RBP14.98□□□□□ -0.01
NUP54-217ENST00000514987 SSX2IPQ9Y2D8 614 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 MIA3Q5JRA6 1907 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 MROH6A6NGR9 719 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 MEI4A8MW99 385 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 E9PBE3 544 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 GRID2O43424 1007 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 KLHL41O60662 606 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 PENKP01210 267 aaPredicted RBP14.98□□□□□ -0.01
NUP54-217ENST00000514987 EPOP01588 193 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 ALDH2P05091 517 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 CHRNGP07510 517 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 F7P08709 466 aaPredicted RBP14.98□□□□□ -0.01
NUP54-217ENST00000514987 ITGAXP20702 1163 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 FGFR3P22607 806 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 GRK4P32298 578 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 CD86P42081 329 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 CHRNA4P43681 627 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 GLRBP48167 497 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 USP46P62068 366 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 SATB1Q01826 763 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 SP3Q02447 781 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 GPR17Q13304 367 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 MSLNQ13421 630 aaPredicted RBP14.98□□□□□ -0.01
NUP54-217ENST00000514987 SERINC3Q13530 473 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 CUL3Q13618 768 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 MBTPS1Q14703 1052 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 POLD3Q15054 466 aaPredicted RBP14.98□□□□□ -0.01
NUP54-217ENST00000514987 PSMD5Q16401 504 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 C10orf120Q5SQS8 335 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 FAM171A1Q5VUB5 890 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 SDHAF4Q5VUM1 108 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 TRIM68Q6AZZ1 485 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 IRGCQ6NXR0 463 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 FBXL22Q6P050 247 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 TFAP2DQ7Z6R9 452 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 SLC22A9Q8IVM8 553 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 REM2Q8IYK8 340 aaPredicted RBP14.98□□□□□ -0.01
NUP54-217ENST00000514987 PHTF2Q8N3S3 785 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 SLC25A41Q8N5S1 370 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 MAPK15Q8TD08 544 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 DTX3LQ8TDB6 740 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 PABPC5Q96DU9 382 aaKnown RBP14.98□□□□□ -0.01
NUP54-217ENST00000514987 FEM1CQ96JP0 617 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 CLPTM1LQ96KA5 538 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 OR52B2Q96RD2 323 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 BCAP29Q9UHQ4 241 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 CDH22Q9UJ99 828 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 RIMKLBQ9ULI2 386 aa14.98□□□□□ -0.01
NUP54-217ENST00000514987 MYLKQ15746 1914 aa14.97□□□□□ -0.01
NUP54-217ENST00000514987 LOC285095A0A1B0GVY8 99 aa14.97□□□□□ -0.01
NUP54-217ENST00000514987 J3KR12 359 aa14.97□□□□□ -0.01
NUP54-217ENST00000514987 HOXA2O43364 376 aa14.97□□□□□ -0.01
NUP54-217ENST00000514987 ZBTB14O43829 449 aa14.97□□□□□ -0.01
NUP54-217ENST00000514987 MMP2P08253 660 aa14.97□□□□□ -0.01
NUP54-217ENST00000514987 LTA4HP09960 611 aaKnown RBP14.97□□□□□ -0.01
NUP54-217ENST00000514987 HLA-DPA1P20036 260 aa14.97□□□□□ -0.01
NUP54-217ENST00000514987 PPARGP37231 505 aaPredicted RBP14.97□□□□□ -0.01
NUP54-217ENST00000514987 GPR15P49685 360 aa14.97□□□□□ -0.01
NUP54-217ENST00000514987 PFKPQ01813 784 aa14.97□□□□□ -0.01
NUP54-217ENST00000514987 KLC1Q07866 573 aa14.97□□□□□ -0.01
NUP54-217ENST00000514987 SLC10A7Q0GE19 358 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms