RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 B4GALNT4Q76KP1 1039 aa14.11□□□□□ -0.15
USP46-209ENST00000514536 ZCCHC9Q8N567 271 aaKnown RBP14.11□□□□□ -0.15
USP46-209ENST00000514536 UBL4BQ8N7F7 174 aa14.11□□□□□ -0.15
USP46-209ENST00000514536 CEP76Q8TAP6 659 aa14.11□□□□□ -0.15
USP46-209ENST00000514536 MAML1Q92585 1016 aa14.11□□□□□ -0.15
USP46-209ENST00000514536 ZNF641Q96N77 438 aaPredicted RBP14.11□□□□□ -0.15
USP46-209ENST00000514536 TUBGCP5Q96RT8 1024 aa14.11□□□□□ -0.15
USP46-209ENST00000514536 MGME1Q9BQP7 344 aa14.11□□□□□ -0.15
USP46-209ENST00000514536 ATP13A3Q9H7F0 1226 aa14.11□□□□□ -0.15
USP46-209ENST00000514536 EBF2Q9HAK2 575 aa14.11□□□□□ -0.15
USP46-209ENST00000514536 NOD2Q9HC29 1040 aa14.11□□□□□ -0.15
USP46-209ENST00000514536 PREBQ9HCU5 417 aa14.11□□□□□ -0.15
USP46-209ENST00000514536 RBM22Q9NW64 420 aaKnown RBP eCLIP14.11□□□□□ -0.15
USP46-209ENST00000514536 DKK3Q9UBP4 350 aa14.11□□□□□ -0.15
USP46-209ENST00000514536 SLCO1B1Q9Y6L6 691 aa14.11□□□□□ -0.15
USP46-209ENST00000514536 MIF4GDA9UHW6 222 aaKnown RBP14.1□□□□□ -0.15
USP46-209ENST00000514536 C10orf142B7Z368 130 aa14.1□□□□□ -0.15
USP46-209ENST00000514536 BCAT2O15382 392 aaPredicted RBP14.1□□□□□ -0.15
USP46-209ENST00000514536 DDX3YO15523 660 aaKnown RBP14.1□□□□□ -0.15
USP46-209ENST00000514536 NEBLO76041 1014 aa14.1□□□□□ -0.15
USP46-209ENST00000514536 JCHAINP01591 159 aa14.1□□□□□ -0.15
USP46-209ENST00000514536 PECAM1P16284 738 aaPredicted RBP14.1□□□□□ -0.15
USP46-209ENST00000514536 ITIH2P19823 946 aa14.1□□□□□ -0.15
USP46-209ENST00000514536 CR2P20023 1033 aa14.1□□□□□ -0.15
USP46-209ENST00000514536 TGM2P21980 687 aa14.1□□□□□ -0.15
USP46-209ENST00000514536 CD27P26842 260 aa14.1□□□□□ -0.15
USP46-209ENST00000514536 ABL2P42684 1182 aa14.1□□□□□ -0.15
USP46-209ENST00000514536 ID4P47928 161 aa14.1□□□□□ -0.15
USP46-209ENST00000514536 NR2C2P49116 596 aa14.1□□□□□ -0.15
USP46-209ENST00000514536 AP1S1P61966 158 aa14.1□□□□□ -0.15
USP46-209ENST00000514536 BCL2L1Q07817 233 aa14.1□□□□□ -0.15
USP46-209ENST00000514536 LRRC73Q5JTD7 316 aa14.1□□□□□ -0.15
USP46-209ENST00000514536 FAM182AQ5T1J6 154 aa14.1□□□□□ -0.15
USP46-209ENST00000514536 BBS12Q6ZW61 710 aa14.1□□□□□ -0.15
USP46-209ENST00000514536 BZW1Q7L1Q6 419 aaKnown RBP14.1□□□□□ -0.15
USP46-209ENST00000514536 PRPF39Q86UA1 669 aaKnown RBP14.1□□□□□ -0.15
USP46-209ENST00000514536 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.1□□□□□ -0.15
USP46-209ENST00000514536 C12orf50Q8NA57 414 aaPredicted RBP14.1□□□□□ -0.15
USP46-209ENST00000514536 C1orf216Q8TAB5 229 aa14.1□□□□□ -0.15
USP46-209ENST00000514536 P3H4Q92791 437 aa14.1□□□□□ -0.15
USP46-209ENST00000514536 FATE1Q969F0 183 aa14.1□□□□□ -0.15
USP46-209ENST00000514536 HAUS1Q96CS2 278 aa14.1□□□□□ -0.15
USP46-209ENST00000514536 PDLIM2Q96JY6 352 aa14.1□□□□□ -0.15
USP46-209ENST00000514536 OLFM3Q96PB7 478 aa14.1□□□□□ -0.15
USP46-209ENST00000514536 NUDCD1Q96RS6 583 aa14.1□□□□□ -0.15
USP46-209ENST00000514536 HERPUD2Q9BSE4 406 aa14.1□□□□□ -0.15
USP46-209ENST00000514536 OSBPL8Q9BZF1 889 aa14.1□□□□□ -0.15
USP46-209ENST00000514536 SCUBE2Q9NQ36 999 aa14.1□□□□□ -0.15
USP46-209ENST00000514536 FSCN3Q9NQT6 498 aa14.1□□□□□ -0.15
USP46-209ENST00000514536 SUSD2Q9UGT4 822 aa14.1□□□□□ -0.15
USP46-209ENST00000514536 FADS3Q9Y5Q0 445 aa14.1□□□□□ -0.15
USP46-209ENST00000514536 A0A1B0GTW7 788 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 A0A1W2PPC4 97 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 A0A1W2PQU0 124 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 KCNK1O00180 336 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 NEMP1O14524 444 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 PPP1R12AO14974 1030 aaPredicted RBP14.09□□□□□ -0.15
USP46-209ENST00000514536 SERPINF2P08697 491 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 XPAP23025 273 aaPredicted RBP14.09□□□□□ -0.15
USP46-209ENST00000514536 SERPINA4P29622 427 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 CETN2P41208 172 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 MAPK8P45983 427 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 ZNF211Q13398 564 aaPredicted RBP14.09□□□□□ -0.15
USP46-209ENST00000514536 AASDHQ4L235 1098 aaPredicted RBP14.09□□□□□ -0.15
USP46-209ENST00000514536 CFAP58Q5T655 872 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 CCDC181Q5TID7 509 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 NEK5Q6P3R8 708 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 SLC23A3Q6PIS1 610 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 RABEPKQ7Z6M1 372 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 TRIM69Q86WT6 500 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 PAF1Q8N7H5 531 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 HCAR2Q8TDS4 363 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 KLK6Q92876 244 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 RAB7BQ96AH8 199 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 HES6Q96HZ4 224 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 FEM1CQ96JP0 617 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 ORAI3Q9BRQ5 295 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 NUSAP1Q9BXS6 441 aaKnown RBP14.09□□□□□ -0.15
USP46-209ENST00000514536 KCNF1Q9H3M0 494 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 RXFP3Q9NSD7 469 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 SLC6A14Q9UN76 642 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 ZFR2Q9UPR6 939 aaKnown RBP14.09□□□□□ -0.15
USP46-209ENST00000514536 ITM2BQ9Y287 266 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 TTLL3Q9Y4R7 772 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 PCDHGC4Q9Y5F7 938 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 DMXL1Q9Y485 3027 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.09□□□□□ -0.15
USP46-209ENST00000514536 LATO43561 262 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 AP1G1O43747 822 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 GDF9O60383 454 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 CSNK1EP49674 416 aaKnown RBP14.09□□□□□ -0.15
USP46-209ENST00000514536 FOXK2Q01167 660 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 SEL1L3Q68CR1 1132 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 ZC3H18Q86VM9 953 aaKnown RBP14.09□□□□□ -0.15
USP46-209ENST00000514536 HORMAD1Q86X24 394 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 ZSWIM9Q86XI8 627 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 SEMA3CQ99985 751 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 BRD8Q9H0E9 1235 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 TM9SF3Q9HD45 589 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 SEPT10Q9P0V9 454 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms