RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 TRIM38O00635 465 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 NEMP1O14524 444 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 FPGTO14772 594 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 SIGLEC6O43699 453 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 PIGNO95427 931 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 GIMD1P0DJR0 217 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 NME1P15531 152 aaKnown RBP10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 ERCC2P18074 760 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 ACP1P24666 158 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 PCK1P35558 622 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 HCAR3P49019 387 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 PAPOLAP51003 745 aaKnown RBP10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 SUOXP51687 545 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 PFN3P60673 137 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 SGCGQ13326 291 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 ZNF211Q13398 564 aaPredicted RBP10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 GRM3Q14832 879 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 ACAP1Q15027 740 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 DPYSL2Q16555 572 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 TDRD12Q587J7 1177 aaKnown RBP10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 LRRC73Q5JTD7 316 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 TPRG1LQ5T0D9 272 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 PARGQ86W56 976 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 MDM1Q8TC05 714 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 HCAR2Q8TDS4 363 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 CENPTQ96BT3 561 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 IQCDQ96DY2 449 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 NCAPGQ9BPX3 1015 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 CAAP1Q9H8G2 361 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 NLGN3Q9NZ94 848 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 MYO1AQ9UBC5 1043 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 CAPN11Q9UMQ6 739 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 DAPK3O43293 454 aa10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 CSF2P04141 144 aa10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 GYPCP04921 128 aa10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 SERPING1P05155 500 aa10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 TCF4P15884 667 aa10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 TIMP2P16035 220 aa10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 PTMSP20962 102 aa10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 IL1R2P27930 398 aa10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 HNF1BP35680 557 aa10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 IGFALSP35858 605 aa10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 RGRP47804 291 aa10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 CSNK1DP48730 415 aa10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 CLDN6P56747 220 aa10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 UBASH3AP57075 661 aa10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 HNRNPKP61978 463 aaKnown RBP eCLIP10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 ZBED6P86452 979 aa10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 ELP6Q0PNE2 266 aa10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 PDE1CQ14123 709 aaPredicted RBP10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 TMEM52BQ4KMG9 183 aa10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 PPP6R3Q5H9R7 873 aaPredicted RBP10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 HES3Q5TGS1 186 aa10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 KDM7AQ6ZMT4 941 aa10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 ARHGAP36Q6ZRI8 547 aa10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 TTC7BQ86TV6 843 aa10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 NIPA2Q8N8Q9 360 aa10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 TP53I13Q8NBR0 393 aaPredicted RBP10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 ZNF548Q8NEK5 533 aaPredicted RBP10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 CXorf40AQ8TE69 158 aa10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 RFFLQ8WZ73 363 aa10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 ZNF641Q96N77 438 aaPredicted RBP10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 TUBGCP5Q96RT8 1024 aa10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 THAP2Q9H0W7 228 aa10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 ZWILCHQ9H900 591 aa10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 DNAJC28Q9NX36 388 aa10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 CWC15Q9P013 229 aaKnown RBP10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 PKD1L2Q7Z442 2459 aa10.57□□□□□ -0.72
HMGXB3-205ENST00000514469 LY6G6EA0A0G2JKS1 128 aa10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 GOLGA6L19H0YKK7 550 aa10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 H3BM21 787 aa10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 DFFAO00273 331 aa10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 SCAMP1O15126 338 aa10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 FFAR2O15552 330 aa10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 BUB1BO60566 1050 aaPredicted RBP10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 MMP20O60882 483 aa10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 TM7SF2O76062 418 aa10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 CYP1A2P05177 515 aa10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 ALPPL2P10696 532 aa10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 CKMT1AP12532 417 aa10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 ITIH2P19823 946 aa10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 MMP12P39900 470 aa10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 SLC25A11Q02978 314 aaKnown RBP10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 IL10RBQ08334 325 aa10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 EIF2B5Q13144 721 aaKnown RBP10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 PIGHQ14442 188 aaPredicted RBP10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 RFTN1Q14699 578 aaPredicted RBP10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 UGP2Q16851 508 aa10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 SMTNL2Q2TAL5 461 aa10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 ZSCAN23Q3MJ62 389 aa10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 HS1BP3Q53T59 392 aa10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 ZNF542PQ5EBM4 170 aa10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 BRAT1Q6PJG6 821 aa10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 VPS36Q86VN1 386 aa10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 ZSWIM9Q86XI8 627 aa10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 LZTR1Q8N653 840 aa10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 PDCD7Q8N8D1 485 aaKnown RBP10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 FAM181AQ8N9Y4 354 aa10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 TSEN2Q8NCE0 465 aaKnown RBP10.56□□□□□ -0.72
HMGXB3-205ENST00000514469 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms