RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 PEX5P50542 639 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 ATP1A2P50993 1020 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 ARSDP51689 593 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 CETN1Q12798 172 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 C16orf72Q14CZ0 275 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 TCEA2Q15560 299 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 BRMS1LQ5PSV4 323 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 ARTNQ5T4W7 220 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 TMEM164Q5U3C3 297 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 ANKRD40Q6AI12 368 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 OLFML1Q6UWY5 402 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 Q8N9G6 341 aaPredicted RBP11.09□□□□□ -0.63
DDX41-216ENST00000513562 JPH3Q8WXH2 748 aaPredicted RBP11.09□□□□□ -0.63
DDX41-216ENST00000513562 NKD1Q969G9 470 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 TSACCQ96A04 125 aaPredicted RBP11.09□□□□□ -0.63
DDX41-216ENST00000513562 ISG20Q96AZ6 181 aaKnown RBP11.09□□□□□ -0.63
DDX41-216ENST00000513562 CATSPER2Q96P56 530 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 CPXM1Q96SM3 734 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 RBM15Q96T37 977 aaKnown RBP eCLIP11.09□□□□□ -0.63
DDX41-216ENST00000513562 SPON2Q9BUD6 331 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 TM6SF2Q9BZW4 377 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 TKTL2Q9H0I9 626 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 ATP13A1Q9HD20 1204 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 PLAAQ9Y263 795 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 SNX10Q9Y5X0 201 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 CXorf51AA0A1B0GTR3 108 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 ENO4A6NNW6 628 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 TMEM110-MUSTN1A8MSY1 372 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 MMP20O60882 483 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 LIFP15018 202 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 GNA15P30679 374 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 CD97P48960 835 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 CXCR3P49682 368 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 LRRC63Q05C16 580 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 NFATC4Q14934 902 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 IRF4Q15306 451 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 PHF19Q5T6S3 580 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 ACBD5Q5T8D3 534 aaPredicted RBP11.08□□□□□ -0.64
DDX41-216ENST00000513562 HIST2H2BCQ6DN03 193 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 OGFOD3Q6PK18 319 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 LRRC31Q6UY01 552 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 C11orf57Q6ZUT1 292 aaPredicted RBP11.08□□□□□ -0.64
DDX41-216ENST00000513562 FAM183BPQ6ZVS7 135 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 SLC26A9Q7LBE3 791 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 WDTC1Q8N5D0 677 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 OR6K2Q8NGY2 324 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 C9orf43Q8TAL5 461 aaPredicted RBP11.08□□□□□ -0.64
DDX41-216ENST00000513562 GPBAR1Q8TDU6 330 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 CXorf40AQ8TE69 158 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 MIB2Q96AX9 1013 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 C1orf74Q96LT6 269 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 OSBPL1AQ9BXW6 950 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 CDH19Q9H159 772 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 SEMA6CQ9H3T2 930 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 WDCPQ9H6R7 721 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 LRRC4CQ9HCJ2 640 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 ACP6Q9NPH0 428 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 AKAP7Q9P0M2 348 aaPredicted RBP11.08□□□□□ -0.64
DDX41-216ENST00000513562 PCDHGA3Q9Y5H0 932 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 ACTL7AQ9Y615 435 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 KIF26BQ2KJY2 2108 aa11.08□□□□□ -0.64
DDX41-216ENST00000513562 RP1P56715 2156 aa11.07□□□□□ -0.64
DDX41-216ENST00000513562 TDRD6O60522 2096 aaKnown RBP11.07□□□□□ -0.64
DDX41-216ENST00000513562 TRIM49BA6NDI0 452 aa11.07□□□□□ -0.64
DDX41-216ENST00000513562 THAP12O43422 761 aa11.07□□□□□ -0.64
DDX41-216ENST00000513562 GSRP00390 522 aa11.07□□□□□ -0.64
DDX41-216ENST00000513562 UGT2B4P06133 528 aa11.07□□□□□ -0.64
DDX41-216ENST00000513562 CCL4P13236 92 aa11.07□□□□□ -0.64
DDX41-216ENST00000513562 HTR1BP28222 390 aa11.07□□□□□ -0.64
DDX41-216ENST00000513562 SRP54P61011 504 aaKnown RBP11.07□□□□□ -0.64
DDX41-216ENST00000513562 GNA12Q03113 381 aa11.07□□□□□ -0.64
DDX41-216ENST00000513562 PKP1Q13835 747 aa11.07□□□□□ -0.64
DDX41-216ENST00000513562 HLTFQ14527 1009 aaKnown RBP eCLIP11.07□□□□□ -0.64
DDX41-216ENST00000513562 KLHL40Q2TBA0 621 aa11.07□□□□□ -0.64
DDX41-216ENST00000513562 MAP9Q49MG5 647 aa11.07□□□□□ -0.64
DDX41-216ENST00000513562 C14orf28Q4W4Y0 310 aa11.07□□□□□ -0.64
DDX41-216ENST00000513562 EFHC2Q5JST6 749 aa11.07□□□□□ -0.64
DDX41-216ENST00000513562 LRRC73Q5JTD7 316 aa11.07□□□□□ -0.64
DDX41-216ENST00000513562 ENPP7Q6UWV6 458 aa11.07□□□□□ -0.64
DDX41-216ENST00000513562 NYAP1Q6ZVC0 841 aa11.07□□□□□ -0.64
DDX41-216ENST00000513562 RYBPQ8N488 228 aaPredicted RBP11.07□□□□□ -0.64
DDX41-216ENST00000513562 EHBP1Q8NDI1 1231 aa11.07□□□□□ -0.64
DDX41-216ENST00000513562 ZNF397Q8NF99 534 aaPredicted RBP11.07□□□□□ -0.64
DDX41-216ENST00000513562 OR2AP1Q8NGE2 309 aa11.07□□□□□ -0.64
DDX41-216ENST00000513562 ARHGEF2Q92974 986 aaKnown RBP11.07□□□□□ -0.64
DDX41-216ENST00000513562 PMEPA1Q969W9 287 aa11.07□□□□□ -0.64
DDX41-216ENST00000513562 PGAP3Q96FM1 320 aaPredicted RBP11.07□□□□□ -0.64
DDX41-216ENST00000513562 KLHL32Q96NJ5 620 aa11.07□□□□□ -0.64
DDX41-216ENST00000513562 NPY6RQ99463 290 aa11.07□□□□□ -0.64
DDX41-216ENST00000513562 ZNF71Q9NQZ8 489 aaPredicted RBP11.07□□□□□ -0.64
DDX41-216ENST00000513562 RMND1Q9NWS8 449 aa11.07□□□□□ -0.64
DDX41-216ENST00000513562 RRN3Q9NYV6 651 aa11.07□□□□□ -0.64
DDX41-216ENST00000513562 KLQ9UEF7 1012 aa11.07□□□□□ -0.64
DDX41-216ENST00000513562 DGKBQ9Y6T7 804 aa11.07□□□□□ -0.64
DDX41-216ENST00000513562 SPTAN1Q13813 2472 aaKnown RBP11.06□□□□□ -0.64
DDX41-216ENST00000513562 ZNF891A8MT65 544 aaPredicted RBP11.06□□□□□ -0.64
DDX41-216ENST00000513562 KRIT1O00522 736 aa11.06□□□□□ -0.64
DDX41-216ENST00000513562 HGSO14964 777 aaPredicted RBP11.06□□□□□ -0.64
DDX41-216ENST00000513562 NUDT21O43809 227 aaKnown RBP11.06□□□□□ -0.64
DDX41-216ENST00000513562 CPNE6O95741 557 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms