RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 SKA1Q96BD8 255 aa10.05□□□□□ -0.8
CCL28-203ENST00000513525 MS4A14Q96JA4 679 aa10.05□□□□□ -0.8
CCL28-203ENST00000513525 CFAP57Q96MR6 1250 aa10.05□□□□□ -0.8
CCL28-203ENST00000513525 SLC6A18Q96N87 628 aa10.05□□□□□ -0.8
CCL28-203ENST00000513525 MUC3BQ9H195 1237 aa10.05□□□□□ -0.8
CCL28-203ENST00000513525 VIPAS39Q9H9C1 493 aa10.05□□□□□ -0.8
CCL28-203ENST00000513525 METTL5Q9NRN9 209 aaKnown RBP10.05□□□□□ -0.8
CCL28-203ENST00000513525 ZNF212Q9UDV6 495 aa10.05□□□□□ -0.8
CCL28-203ENST00000513525 VPS51Q9UID3 782 aa10.05□□□□□ -0.8
CCL28-203ENST00000513525 PPM1HQ9ULR3 514 aa10.05□□□□□ -0.8
CCL28-203ENST00000513525 PACSIN2Q9UNF0 486 aaPredicted RBP10.05□□□□□ -0.8
CCL28-203ENST00000513525 ACACAQ13085 2346 aa10.05□□□□□ -0.8
CCL28-203ENST00000513525 PKD1L2Q7Z442 2459 aa10.04□□□□□ -0.8
CCL28-203ENST00000513525 A0A1B0GTQ1 180 aa10.04□□□□□ -0.8
CCL28-203ENST00000513525 CXorf51AA0A1B0GTR3 108 aa10.04□□□□□ -0.8
CCL28-203ENST00000513525 A0A1W2PR77 199 aa10.04□□□□□ -0.8
CCL28-203ENST00000513525 ILVBLA1L0T0 632 aa10.04□□□□□ -0.8
CCL28-203ENST00000513525 H0Y8X5 98 aa10.04□□□□□ -0.8
CCL28-203ENST00000513525 GOLGA8SH3BPF8 625 aa10.04□□□□□ -0.8
CCL28-203ENST00000513525 DDX3YO15523 660 aaKnown RBP10.04□□□□□ -0.8
CCL28-203ENST00000513525 WNT1P04628 370 aa10.04□□□□□ -0.8
CCL28-203ENST00000513525 UNGP13051 313 aaPredicted RBP10.04□□□□□ -0.8
CCL28-203ENST00000513525 GRK6P43250 576 aa10.04□□□□□ -0.8
CCL28-203ENST00000513525 METAP1P53582 386 aa10.04□□□□□ -0.8
CCL28-203ENST00000513525 C21orf59P57076 290 aa10.04□□□□□ -0.8
CCL28-203ENST00000513525 NRG1Q02297 640 aaPredicted RBP10.04□□□□□ -0.8
CCL28-203ENST00000513525 C6orf118Q5T5N4 469 aa10.04□□□□□ -0.8
CCL28-203ENST00000513525 AGBL4Q5VU57 503 aa10.04□□□□□ -0.8
CCL28-203ENST00000513525 ZNF783Q6ZMS7 281 aa10.04□□□□□ -0.8
CCL28-203ENST00000513525 SLCO6A1Q86UG4 719 aa10.04□□□□□ -0.8
CCL28-203ENST00000513525 TRIM69Q86WT6 500 aa10.04□□□□□ -0.8
CCL28-203ENST00000513525 UBL4BQ8N7F7 174 aa10.04□□□□□ -0.8
CCL28-203ENST00000513525 EIF1ADQ8N9N8 165 aaKnown RBP10.04□□□□□ -0.8
CCL28-203ENST00000513525 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.04□□□□□ -0.8
CCL28-203ENST00000513525 ZNF653Q96CK0 615 aa10.04□□□□□ -0.8
CCL28-203ENST00000513525 VCPIP1Q96JH7 1222 aa10.04□□□□□ -0.8
CCL28-203ENST00000513525 CCDC114Q96M63 670 aa10.04□□□□□ -0.8
CCL28-203ENST00000513525 LRRC1Q9BTT6 524 aa10.04□□□□□ -0.8
CCL28-203ENST00000513525 ACBD3Q9H3P7 528 aa10.04□□□□□ -0.8
CCL28-203ENST00000513525 RETREG1Q9H6L5 497 aa10.04□□□□□ -0.8
CCL28-203ENST00000513525 TMPRSS4Q9NRS4 437 aa10.04□□□□□ -0.8
CCL28-203ENST00000513525 PPARGC1AQ9UBK2 798 aaKnown RBP10.04□□□□□ -0.8
CCL28-203ENST00000513525 ZMIZ1Q9ULJ6 1067 aa10.04□□□□□ -0.8
CCL28-203ENST00000513525 BTBD3Q9Y2F9 522 aa10.04□□□□□ -0.8
CCL28-203ENST00000513525 ALG6Q9Y672 507 aa10.04□□□□□ -0.8
CCL28-203ENST00000513525 ADAMTS20P59510 1910 aa10.04□□□□□ -0.8
CCL28-203ENST00000513525 TBC1D3DA0A087WVF3 549 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 TBC1D3IA0A087WXS9 549 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 TBC1D3EA0A087X179 549 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 TBC1D3KA0A087X1G2 549 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 A0A0D9SEW6 157 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 TBC1D3FA6NER0 549 aaPredicted RBP10.03□□□□□ -0.8
CCL28-203ENST00000513525 TBC1D3LB9A6J9 549 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 YKT6O15498 198 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 SNAP91O60641 907 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 MT-CO1P00395 513 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 TBC1D3HP0C7X1 549 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 CTNNA2P26232 953 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 OR1E1P30953 314 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 PTPN9P43378 593 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 NSFP46459 744 aaKnown RBP10.03□□□□□ -0.8
CCL28-203ENST00000513525 DNA2P51530 1060 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 PPP2CBP62714 309 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 PPP2CAP67775 309 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 CNTN1Q12860 1018 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 GPS2Q13227 327 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 INAVAQ3KP66 663 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 MANEALQ5VSG8 457 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 TBC1D3GQ6DHY5 549 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 TBC1D3CQ6IPX1 549 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 NAPEPLDQ6IQ20 393 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.03□□□□□ -0.8
CCL28-203ENST00000513525 STRADAQ7RTN6 431 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 TFAP2DQ7Z6R9 452 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 IQCHQ86VS3 1027 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 FAM131BQ86XD5 332 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 IFT20Q8IY31 132 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 MCOLN2Q8IZK6 566 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 TBC1D3Q8IZP1 549 aaPredicted RBP10.03□□□□□ -0.8
CCL28-203ENST00000513525 EMC1Q8N766 993 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 ATP11CQ8NB49 1132 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 TMIEQ8NEW7 156 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 OR2A12Q8NGT7 310 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 ZNF564Q8TBZ8 553 aaPredicted RBP10.03□□□□□ -0.8
CCL28-203ENST00000513525 ELF4Q99607 663 aaPredicted RBP10.03□□□□□ -0.8
CCL28-203ENST00000513525 NUP85Q9BW27 656 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 ZYG11BQ9C0D3 744 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 GOLPH3Q9H4A6 298 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 AASDHPPTQ9NRN7 309 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 SMARCAL1Q9NZC9 954 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 MPP6Q9NZW5 540 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 CNOT8Q9UFF9 292 aaKnown RBP10.03□□□□□ -0.8
CCL28-203ENST00000513525 LCMT1Q9UIC8 334 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 DMTF1Q9Y222 760 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 SNX10Q9Y5X0 201 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 LAMA5O15230 3695 aa10.03□□□□□ -0.8
CCL28-203ENST00000513525 CCDC66A2RUB6 948 aa10.02□□□□□ -0.8
CCL28-203ENST00000513525 C2CD4BA6NLJ0 364 aa10.02□□□□□ -0.8
CCL28-203ENST00000513525 MAGEC1O60732 1142 aa10.02□□□□□ -0.8
CCL28-203ENST00000513525 ZMPSTE24O75844 475 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms