RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 ELP5Q8TE02 316 aa5.6□□□□□ -1.51
CHD1-209ENST00000512844 ELP4Q96EB1 424 aa5.6□□□□□ -1.51
CHD1-209ENST00000512844 APOPT1Q96IL0 206 aa5.6□□□□□ -1.51
CHD1-209ENST00000512844 TXNDC15Q96J42 360 aa5.6□□□□□ -1.51
CHD1-209ENST00000512844 TBATAQ96M53 351 aa5.6□□□□□ -1.51
CHD1-209ENST00000512844 SIN3AQ96ST3 1273 aa5.6□□□□□ -1.51
CHD1-209ENST00000512844 CLSTN3Q9BQT9 956 aa5.6□□□□□ -1.51
CHD1-209ENST00000512844 NUF2Q9BZD4 464 aa5.6□□□□□ -1.51
CHD1-209ENST00000512844 WASH6PQ9NQA3 447 aa5.6□□□□□ -1.51
CHD1-209ENST00000512844 SNTG1Q9NSN8 517 aa5.6□□□□□ -1.51
CHD1-209ENST00000512844 SAGE1Q9NXZ1 904 aa5.6□□□□□ -1.51
CHD1-209ENST00000512844 KIAA1456Q9P272 454 aa5.6□□□□□ -1.51
CHD1-209ENST00000512844 CREB3O43889 395 aa5.59□□□□□ -1.51
CHD1-209ENST00000512844 GLUD1P00367 558 aa5.59□□□□□ -1.51
CHD1-209ENST00000512844 ACAA1P09110 424 aaPredicted RBP5.59□□□□□ -1.51
CHD1-209ENST00000512844 HOXA11P31270 313 aaPredicted RBP5.59□□□□□ -1.51
CHD1-209ENST00000512844 CCKARP32238 428 aa5.59□□□□□ -1.51
CHD1-209ENST00000512844 RPL3P39023 403 aaKnown RBP5.59□□□□□ -1.51
CHD1-209ENST00000512844 AMTP48728 403 aa5.59□□□□□ -1.51
CHD1-209ENST00000512844 GLUD2P49448 558 aa5.59□□□□□ -1.51
CHD1-209ENST00000512844 CYP4A11Q02928 519 aa5.59□□□□□ -1.51
CHD1-209ENST00000512844 GALNT2Q10471 571 aa5.59□□□□□ -1.51
CHD1-209ENST00000512844 EFHC1Q5JVL4 640 aa5.59□□□□□ -1.51
CHD1-209ENST00000512844 KIAA1161Q6NSJ0 714 aa5.59□□□□□ -1.51
CHD1-209ENST00000512844 TMEM81Q6P7N7 255 aa5.59□□□□□ -1.51
CHD1-209ENST00000512844 TMTC1Q8IUR5 882 aa5.59□□□□□ -1.51
CHD1-209ENST00000512844 KIAA2013Q8IYS2 634 aa5.59□□□□□ -1.51
CHD1-209ENST00000512844 HTRA1Q92743 480 aa5.59□□□□□ -1.51
CHD1-209ENST00000512844 MED30Q96HR3 178 aa5.59□□□□□ -1.51
CHD1-209ENST00000512844 ZNF479Q96JC4 524 aa5.59□□□□□ -1.51
CHD1-209ENST00000512844 MMTAG2Q9BU76 263 aaKnown RBP5.59□□□□□ -1.51
CHD1-209ENST00000512844 NDRG3Q9UGV2 375 aa5.59□□□□□ -1.51
CHD1-209ENST00000512844 A0A1B0GVM2 712 aa5.58□□□□□ -1.52
CHD1-209ENST00000512844 KCNJ13O60928 360 aa5.58□□□□□ -1.52
CHD1-209ENST00000512844 COX7A2P14406 83 aa5.58□□□□□ -1.52
CHD1-209ENST00000512844 TTKP33981 857 aa5.58□□□□□ -1.52
CHD1-209ENST00000512844 GGT5P36269 586 aa5.58□□□□□ -1.52
CHD1-209ENST00000512844 RFX5P48382 616 aaPredicted RBP5.58□□□□□ -1.52
CHD1-209ENST00000512844 NR1H2P55055 460 aa5.58□□□□□ -1.52
CHD1-209ENST00000512844 HNRNPA0Q13151 305 aaKnown RBP5.58□□□□□ -1.52
CHD1-209ENST00000512844 MYBPC2Q14324 1141 aa5.58□□□□□ -1.52
CHD1-209ENST00000512844 HNF4GQ14541 408 aa5.58□□□□□ -1.52
CHD1-209ENST00000512844 C8orf82Q6P1X6 216 aaPredicted RBP5.58□□□□□ -1.52
CHD1-209ENST00000512844 CPLX2Q6PUV4 134 aaKnown RBP5.58□□□□□ -1.52
CHD1-209ENST00000512844 SFTPA2Q8IWL1 248 aa5.58□□□□□ -1.52
CHD1-209ENST00000512844 TCP11L2Q8N4U5 519 aa5.58□□□□□ -1.52
CHD1-209ENST00000512844 GJC3Q8NFK1 279 aa5.58□□□□□ -1.52
CHD1-209ENST00000512844 NEUROG1Q92886 237 aa5.58□□□□□ -1.52
CHD1-209ENST00000512844 PHF21BQ96EK2 531 aa5.58□□□□□ -1.52
CHD1-209ENST00000512844 BBS4Q96RK4 519 aa5.58□□□□□ -1.52
CHD1-209ENST00000512844 MEIS3Q99687 375 aa5.58□□□□□ -1.52
CHD1-209ENST00000512844 FUZQ9BT04 418 aa5.58□□□□□ -1.52
CHD1-209ENST00000512844 TM6SF1Q9BZW5 370 aa5.58□□□□□ -1.52
CHD1-209ENST00000512844 GGA3Q9NZ52 723 aa5.58□□□□□ -1.52
CHD1-209ENST00000512844 SELENONQ9NZV5 590 aa5.58□□□□□ -1.52
CHD1-209ENST00000512844 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.58□□□□□ -1.52
CHD1-209ENST00000512844 CRYL1Q9Y2S2 319 aa5.58□□□□□ -1.52
CHD1-209ENST00000512844 RAI2Q9Y5P3 530 aa5.58□□□□□ -1.52
CHD1-209ENST00000512844 LOC102724159A0A0B4J2E5 919 aa5.57□□□□□ -1.52
CHD1-209ENST00000512844 IGHV4-28A0A0C4DH34 117 aa5.57□□□□□ -1.52
CHD1-209ENST00000512844 URODP06132 367 aa5.57□□□□□ -1.52
CHD1-209ENST00000512844 GALTP07902 379 aa5.57□□□□□ -1.52
CHD1-209ENST00000512844 CD58P19256 250 aa5.57□□□□□ -1.52
CHD1-209ENST00000512844 NANOS2P60321 138 aaKnown RBP5.57□□□□□ -1.52
CHD1-209ENST00000512844 ABATP80404 500 aa5.57□□□□□ -1.52
CHD1-209ENST00000512844 ZXDBP98169 803 aa5.57□□□□□ -1.52
CHD1-209ENST00000512844 LTBQ06643 244 aa5.57□□□□□ -1.52
CHD1-209ENST00000512844 Q0VFX4 171 aa5.57□□□□□ -1.52
CHD1-209ENST00000512844 PPP2R5BQ15173 497 aa5.57□□□□□ -1.52
CHD1-209ENST00000512844 PWP2Q15269 919 aaKnown RBP5.57□□□□□ -1.52
CHD1-209ENST00000512844 HIST2H2ACQ16777 129 aaPredicted RBP5.57□□□□□ -1.52
CHD1-209ENST00000512844 ALFQ53S48 1182 aa5.57□□□□□ -1.52
CHD1-209ENST00000512844 ZNF667Q5HYK9 610 aa5.57□□□□□ -1.52
CHD1-209ENST00000512844 PRAMEF19Q5SWL8 479 aa5.57□□□□□ -1.52
CHD1-209ENST00000512844 UBAP2Q5T6F2 1119 aaKnown RBP5.57□□□□□ -1.52
CHD1-209ENST00000512844 SPATA2LQ8IUW3 424 aaPredicted RBP5.57□□□□□ -1.52
CHD1-209ENST00000512844 FAM216AQ8WUB2 273 aa5.57□□□□□ -1.52
CHD1-209ENST00000512844 TRIB2Q92519 343 aa5.57□□□□□ -1.52
CHD1-209ENST00000512844 RNF125Q96EQ8 232 aa5.57□□□□□ -1.52
CHD1-209ENST00000512844 MPHOSPH8Q99549 860 aa5.57□□□□□ -1.52
CHD1-209ENST00000512844 TTYH1Q9H313 450 aaPredicted RBP5.57□□□□□ -1.52
CHD1-209ENST00000512844 PDP2Q9P2J9 529 aa5.57□□□□□ -1.52
CHD1-209ENST00000512844 CTNNAL1Q9UBT7 734 aa5.57□□□□□ -1.52
CHD1-209ENST00000512844 FAM96BQ9Y3D0 163 aa5.57□□□□□ -1.52
CHD1-209ENST00000512844 ADGRF5Q8IZF2 1346 aa5.56□□□□□ -1.52
CHD1-209ENST00000512844 TACC1O75410 805 aa5.56□□□□□ -1.52
CHD1-209ENST00000512844 RGS11O94810 467 aa5.56□□□□□ -1.52
CHD1-209ENST00000512844 UFM1P61960 85 aa5.56□□□□□ -1.52
CHD1-209ENST00000512844 ADORA2A-AS1P86434 159 aa5.56□□□□□ -1.52
CHD1-209ENST00000512844 NEXNQ0ZGT2 675 aa5.56□□□□□ -1.52
CHD1-209ENST00000512844 ERV3-1Q14264 604 aa5.56□□□□□ -1.52
CHD1-209ENST00000512844 BAK1Q16611 211 aa5.56□□□□□ -1.52
CHD1-209ENST00000512844 FAM69AQ5T7M9 428 aa5.56□□□□□ -1.52
CHD1-209ENST00000512844 PARP16Q8N5Y8 322 aa5.56□□□□□ -1.52
CHD1-209ENST00000512844 ST8SIA4Q92187 359 aa5.56□□□□□ -1.52
CHD1-209ENST00000512844 MTBPQ96DY7 904 aa5.56□□□□□ -1.52
CHD1-209ENST00000512844 NAF1Q96HR8 494 aaKnown RBP5.56□□□□□ -1.52
CHD1-209ENST00000512844 CAMK1GQ96NX5 476 aa5.56□□□□□ -1.52
CHD1-209ENST00000512844 MSTO1Q9BUK6 570 aa5.56□□□□□ -1.52
CHD1-209ENST00000512844 SMYD2Q9NRG4 433 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms