RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 TAF1BQ53T94 588 aaPredicted RBP12.74□□□□□ -0.37
VEGFA-216ENST00000512683 C6orf132Q5T0Z8 1188 aa12.74□□□□□ -0.37
VEGFA-216ENST00000512683 RWDD4Q6NW29 188 aaKnown RBP12.74□□□□□ -0.37
VEGFA-216ENST00000512683 SASS6Q6UVJ0 657 aa12.74□□□□□ -0.37
VEGFA-216ENST00000512683 EFL1Q7Z2Z2 1120 aaKnown RBP12.74□□□□□ -0.37
VEGFA-216ENST00000512683 RYBPQ8N488 228 aaPredicted RBP12.74□□□□□ -0.37
VEGFA-216ENST00000512683 ATL2Q8NHH9 583 aa12.74□□□□□ -0.37
VEGFA-216ENST00000512683 WDR36Q8NI36 951 aaKnown RBP12.74□□□□□ -0.37
VEGFA-216ENST00000512683 LMX1AQ8TE12 382 aa12.74□□□□□ -0.37
VEGFA-216ENST00000512683 RXFP2Q8WXD0 754 aa12.74□□□□□ -0.37
VEGFA-216ENST00000512683 GDAP1L1Q96MZ0 367 aa12.74□□□□□ -0.37
VEGFA-216ENST00000512683 TTYH3Q9C0H2 523 aa12.74□□□□□ -0.37
VEGFA-216ENST00000512683 KLF15Q9UIH9 416 aa12.74□□□□□ -0.37
VEGFA-216ENST00000512683 LOC400499M0QZD8 3231 aa12.74□□□□□ -0.37
VEGFA-216ENST00000512683 LGALS16A8MUM7 142 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 WASH4PA8MWX3 477 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 KRIT1O00522 736 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 YY2O15391 372 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 KLK10O43240 276 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 SPINT1O43278 529 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 LRIG2O94898 1065 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 IGSF6O95976 241 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 TPM2P07951 284 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 ALPIP09923 528 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 KRT3P12035 628 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 TGM2P21980 687 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 HTR1BP28222 390 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 HTR7P34969 479 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 ACVRL1P37023 503 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 EIF4A3P38919 411 aaKnown RBP12.73□□□□□ -0.37
VEGFA-216ENST00000512683 ABL2P42684 1182 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 ATP11AP98196 1134 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 MYL5Q02045 173 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 PPARDQ03181 441 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 ELP6Q0PNE2 266 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 AGERQ15109 404 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 ELOCQ15369 112 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 SYCP1Q15431 976 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 STX1AQ16623 288 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 PARP15Q460N3 678 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 TMEM52BQ4KMG9 183 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 RAB6CQ53S08 254 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 FKBP15Q5T1M5 1219 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 MACC1Q6ZN28 852 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 CLEC14AQ86T13 490 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 SLC30A5Q8TAD4 765 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 CXorf40AQ8TE69 158 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 VCPIP1Q96JH7 1222 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 KLHL32Q96NJ5 620 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 PCDHB18PQ96TA0 734 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 TM6SF2Q9BZW4 377 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 RAB6CQ9H0N0 254 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 APOBEC3BQ9UH17 382 aaKnown RBP12.73□□□□□ -0.37
VEGFA-216ENST00000512683 DNAI1Q9UI46 699 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 PADI4Q9UM07 663 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 ENTPD2Q9Y5L3 495 aa12.73□□□□□ -0.37
VEGFA-216ENST00000512683 CDRT15L2A8MXV6 281 aa12.72□□□□□ -0.37
VEGFA-216ENST00000512683 GOLGA6L22H0YM25 854 aa12.72□□□□□ -0.37
VEGFA-216ENST00000512683 NTN3O00634 580 aaPredicted RBP12.72□□□□□ -0.37
VEGFA-216ENST00000512683 BUB1O43683 1085 aa12.72□□□□□ -0.37
VEGFA-216ENST00000512683 UGT2B4P06133 528 aa12.72□□□□□ -0.37
VEGFA-216ENST00000512683 UNGP13051 313 aaPredicted RBP12.72□□□□□ -0.37
VEGFA-216ENST00000512683 PLA2G2AP14555 144 aa12.72□□□□□ -0.37
VEGFA-216ENST00000512683 TIMP2P16035 220 aa12.72□□□□□ -0.37
VEGFA-216ENST00000512683 ADKP55263 362 aaKnown RBP12.72□□□□□ -0.37
VEGFA-216ENST00000512683 PTP4A2Q12974 167 aa12.72□□□□□ -0.37
VEGFA-216ENST00000512683 DEFB133Q30KQ1 61 aa12.72□□□□□ -0.37
VEGFA-216ENST00000512683 PRRT3Q5FWE3 981 aa12.72□□□□□ -0.37
VEGFA-216ENST00000512683 CCDC183Q5T5S1 534 aa12.72□□□□□ -0.37
VEGFA-216ENST00000512683 FAXCQ5TGI0 409 aa12.72□□□□□ -0.37
VEGFA-216ENST00000512683 GUSBP11Q6P575 273 aa12.72□□□□□ -0.37
VEGFA-216ENST00000512683 PCSK4Q6UW60 755 aa12.72□□□□□ -0.37
VEGFA-216ENST00000512683 SLFN11Q7Z7L1 901 aa12.72□□□□□ -0.37
VEGFA-216ENST00000512683 PHACTR4Q8IZ21 702 aa12.72□□□□□ -0.37
VEGFA-216ENST00000512683 EMC1Q8N766 993 aa12.72□□□□□ -0.37
VEGFA-216ENST00000512683 RTL3Q8N8U3 475 aaKnown RBP12.72□□□□□ -0.37
VEGFA-216ENST00000512683 VOPP1Q96AW1 172 aa12.72□□□□□ -0.37
VEGFA-216ENST00000512683 LIN37Q96GY3 246 aaPredicted RBP12.72□□□□□ -0.37
VEGFA-216ENST00000512683 PRR11Q96HE9 360 aaPredicted RBP12.72□□□□□ -0.37
VEGFA-216ENST00000512683 ZNF641Q96N77 438 aaPredicted RBP12.72□□□□□ -0.37
VEGFA-216ENST00000512683 ERGIC2Q96RQ1 377 aa12.72□□□□□ -0.37
VEGFA-216ENST00000512683 METTL5Q9NRN9 209 aaKnown RBP12.72□□□□□ -0.37
VEGFA-216ENST00000512683 NDFIP2Q9NV92 336 aa12.72□□□□□ -0.37
VEGFA-216ENST00000512683 TMEM63CQ9P1W3 806 aa12.72□□□□□ -0.37
VEGFA-216ENST00000512683 SATB2Q9UPW6 733 aa12.72□□□□□ -0.37
VEGFA-216ENST00000512683 PCDHGA7Q9Y5G6 932 aa12.72□□□□□ -0.37
VEGFA-216ENST00000512683 ZNF462Q96JM2 2506 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 CCDC187A0A096LP49 1063 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 SIGLEC16A6NMB1 481 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 EIF3CLB5ME19 914 aaKnown RBP12.71□□□□□ -0.37
VEGFA-216ENST00000512683 K7ENP7 123 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 MMP20O60882 483 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 GCATO75600 419 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 MBD3O95983 291 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 PRB1P04280 392 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 CALB1P05937 261 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 ITGA2BP08514 1039 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 ATP1A3P13637 1013 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 DESP17661 470 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 STAT1P42224 750 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms