RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 CCDC15Q0P6D6 951 aa9.26□□□□□ -0.93
NUP54-211ENST00000512151 ELOCQ15369 112 aa9.26□□□□□ -0.93
NUP54-211ENST00000512151 KNOP1Q1ED39 458 aaKnown RBP9.26□□□□□ -0.93
NUP54-211ENST00000512151 SKOR2Q2VWA4 1001 aaPredicted RBP9.26□□□□□ -0.93
NUP54-211ENST00000512151 AMZ1Q400G9 498 aa9.26□□□□□ -0.93
NUP54-211ENST00000512151 MAP9Q49MG5 647 aa9.26□□□□□ -0.93
NUP54-211ENST00000512151 PMF1Q6P1K2 205 aa9.26□□□□□ -0.93
NUP54-211ENST00000512151 OGFOD3Q6PK18 319 aa9.26□□□□□ -0.93
NUP54-211ENST00000512151 DPY19L3Q6ZPD9 716 aa9.26□□□□□ -0.93
NUP54-211ENST00000512151 VPS36Q86VN1 386 aa9.26□□□□□ -0.93
NUP54-211ENST00000512151 CEP57L1Q8IYX8 460 aa9.26□□□□□ -0.93
NUP54-211ENST00000512151 DENND6BQ8NEG7 585 aa9.26□□□□□ -0.93
NUP54-211ENST00000512151 OR6C4Q8NGE1 309 aa9.26□□□□□ -0.93
NUP54-211ENST00000512151 SCG3Q8WXD2 468 aaKnown RBP9.26□□□□□ -0.93
NUP54-211ENST00000512151 C7orf25Q9BPX7 421 aa9.26□□□□□ -0.93
NUP54-211ENST00000512151 TNMDQ9H2S6 317 aa9.26□□□□□ -0.93
NUP54-211ENST00000512151 SLC39A2Q9NP94 309 aa9.26□□□□□ -0.93
NUP54-211ENST00000512151 OCIAD1Q9NX40 245 aa9.26□□□□□ -0.93
NUP54-211ENST00000512151 TMEM63CQ9P1W3 806 aa9.26□□□□□ -0.93
NUP54-211ENST00000512151 CGNQ9P2M7 1197 aaKnown RBP9.26□□□□□ -0.93
NUP54-211ENST00000512151 LRIT1Q9P2V4 623 aa9.26□□□□□ -0.93
NUP54-211ENST00000512151 IL36AQ9UHA7 158 aa9.26□□□□□ -0.93
NUP54-211ENST00000512151 CSMD2Q7Z408 3487 aa9.26□□□□□ -0.93
NUP54-211ENST00000512151 TCAF2A6NFQ2 919 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 F5H5T6 163 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 M0QYT0 321 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 IKBKBO14920 756 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 HGSO14964 777 aaPredicted RBP9.25□□□□□ -0.93
NUP54-211ENST00000512151 DIAPH2O60879 1101 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 ENDOD1O94919 500 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 ALPIP09923 528 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 PYGBP11216 843 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 PNLIPP16233 465 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 GLB1P16278 677 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 F8A1P23610 371 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 L1CAMP32004 1257 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 OR1D5P58170 312 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 DPYDQ12882 1025 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 NNTQ13423 1086 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 PNOCQ13519 176 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 HLTFQ14527 1009 aaKnown RBP eCLIP9.25□□□□□ -0.93
NUP54-211ENST00000512151 CAMK4Q16566 473 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 SYPL2Q5VXT5 272 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 ANKS6Q68DC2 871 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 CNNM4Q6P4Q7 775 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 LINGO4Q6UY18 593 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 RD3Q7Z3Z2 195 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 TMEM135Q86UB9 458 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 GKN2Q86XP6 184 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 ELOA2Q8IYF1 753 aaPredicted RBP9.25□□□□□ -0.93
NUP54-211ENST00000512151 ATP11CQ8NB49 1132 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 ASB12Q8WXK4 309 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 IRGQQ8WZA9 623 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 RNF34Q969K3 372 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 EEF2KMTQ96G04 330 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 SERPINB11Q96P15 392 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 DDA1Q9BW61 102 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 MAGEF1Q9HAY2 307 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 SLC39A1Q9NY26 324 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 VPS51Q9UID3 782 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 VPS28Q9UK41 221 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 ABCA2Q9BZC7 2435 aa9.25□□□□□ -0.93
NUP54-211ENST00000512151 PRRC2CQ9Y520 2896 aaKnown RBP9.25□□□□□ -0.93
NUP54-211ENST00000512151 DIDO1Q9BTC0 2240 aaKnown RBP9.25□□□□□ -0.93
NUP54-211ENST00000512151 O00370 1275 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 DNAJB5O75953 348 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 MBD3O95983 291 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 CTSEP14091 401 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 TCN2P20062 427 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 MPSTP25325 297 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 GGCXP38435 758 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 YPEL5P62699 121 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 INPP5JQ15735 1006 aaPredicted RBP9.24□□□□□ -0.93
NUP54-211ENST00000512151 FBXL22Q6P050 247 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 C22orf39Q6P5X5 142 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 PIM3Q86V86 326 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 XYLT1Q86Y38 959 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 SLC9A9Q8IVB4 645 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 NLGN4XQ8N0W4 816 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 TP53I13Q8NBR0 393 aaPredicted RBP9.24□□□□□ -0.93
NUP54-211ENST00000512151 NLGN4YQ8NFZ3 816 aaPredicted RBP9.24□□□□□ -0.93
NUP54-211ENST00000512151 TFAP2BQ92481 460 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 FUBP1Q96AE4 644 aaKnown RBP9.24□□□□□ -0.93
NUP54-211ENST00000512151 VOPP1Q96AW1 172 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 ZSWIM1Q9BR11 485 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 IMPG2Q9BZV3 1241 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 CLSTN2Q9H4D0 955 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 CYP4F12Q9HCS2 524 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 AKAP7Q9P0M2 348 aaPredicted RBP9.24□□□□□ -0.93
NUP54-211ENST00000512151 TMEM9Q9P0T7 183 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 KCTD3Q9Y597 815 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 B4DGG1 531 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 HNRNPRO43390 633 aaKnown RBP9.24□□□□□ -0.93
NUP54-211ENST00000512151 TSPAN6O43657 245 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 MMP20O60882 483 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 RFPL1O75677 317 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 RASGRP1O95267 797 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 CPNE6O95741 557 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 CALCAP01258 141 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 APOEP02649 317 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms