RNA–Protein interactions for RNA: ENST00000512098.5

SSBP2-215, Transcript of single stranded DNA binding protein 2, human

TSL 5

Gene SSBP2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP2-215	ENST00000512098	SFTPA2	Q8IWL1	248 aa		12.84	□□□□□ -0.35
SSBP2-215	ENST00000512098	SIX6OS1	Q8N1H7	587 aa		12.84	□□□□□ -0.35
SSBP2-215	ENST00000512098	FAM46D	Q8NEK8	389 aa		12.84	□□□□□ -0.35
SSBP2-215	ENST00000512098	GRIN3A	Q8TCU5	1115 aa		12.84	□□□□□ -0.35
SSBP2-215	ENST00000512098	IRGQ	Q8WZA9	623 aa		12.84	□□□□□ -0.35
SSBP2-215	ENST00000512098	TATDN2	Q93075	761 aa		12.84	□□□□□ -0.35
SSBP2-215	ENST00000512098	SNRNP40	Q96DI7	357 aa	Known RBP	12.84	□□□□□ -0.35
SSBP2-215	ENST00000512098	C19orf60	Q96EN9	201 aa		12.84	□□□□□ -0.35
SSBP2-215	ENST00000512098	RANBP9	Q96S59	729 aa		12.84	□□□□□ -0.35
SSBP2-215	ENST00000512098	APOBEC3G	Q9HC16	384 aa	Known RBP	12.84	□□□□□ -0.35
SSBP2-215	ENST00000512098	FBXO8	Q9NRD0	319 aa		12.84	□□□□□ -0.35
SSBP2-215	ENST00000512098	FOXD4L1	Q9NU39	408 aa		12.84	□□□□□ -0.35
SSBP2-215	ENST00000512098	CGN	Q9P2M7	1197 aa	Known RBP	12.84	□□□□□ -0.35
SSBP2-215	ENST00000512098	XPO7	Q9UIA9	1087 aa	Known RBP	12.84	□□□□□ -0.35
SSBP2-215	ENST00000512098	ZNF451	Q9Y4E5	1061 aa		12.84	□□□□□ -0.35
SSBP2-215	ENST00000512098	DGKB	Q9Y6T7	804 aa		12.84	□□□□□ -0.35
SSBP2-215	ENST00000512098	FER1L5	A0AVI2	2057 aa		12.84	□□□□□ -0.35
SSBP2-215	ENST00000512098		F5H5T6	163 aa		12.83	□□□□□ -0.36
SSBP2-215	ENST00000512098	SPTLC2	O15270	562 aa		12.83	□□□□□ -0.36
SSBP2-215	ENST00000512098	MAP3K6	O95382	1288 aa		12.83	□□□□□ -0.36
SSBP2-215	ENST00000512098	CAPN3	P20807	821 aa		12.83	□□□□□ -0.36
SSBP2-215	ENST00000512098	GPR3	P46089	330 aa		12.83	□□□□□ -0.36
SSBP2-215	ENST00000512098	SRP54	P61011	504 aa	Known RBP	12.83	□□□□□ -0.36
SSBP2-215	ENST00000512098	ZNF394	Q53GI3	561 aa		12.83	□□□□□ -0.36
SSBP2-215	ENST00000512098	LINGO4	Q6UY18	593 aa		12.83	□□□□□ -0.36
SSBP2-215	ENST00000512098	PARS2	Q7L3T8	475 aa	Known RBP	12.83	□□□□□ -0.36
SSBP2-215	ENST00000512098	TMEM135	Q86UB9	458 aa		12.83	□□□□□ -0.36
SSBP2-215	ENST00000512098	VPS36	Q86VN1	386 aa		12.83	□□□□□ -0.36
SSBP2-215	ENST00000512098	ATP11C	Q8NB49	1132 aa		12.83	□□□□□ -0.36
SSBP2-215	ENST00000512098	SLC4A11	Q8NBS3	891 aa		12.83	□□□□□ -0.36
SSBP2-215	ENST00000512098	OR52K2	Q8NGK3	314 aa		12.83	□□□□□ -0.36
SSBP2-215	ENST00000512098	HDAC11	Q96DB2	347 aa		12.83	□□□□□ -0.36
SSBP2-215	ENST00000512098	EPSTI1	Q96J88	318 aa		12.83	□□□□□ -0.36
SSBP2-215	ENST00000512098	C1QTNF7	Q9BXJ2	289 aa		12.83	□□□□□ -0.36
SSBP2-215	ENST00000512098	PDP2	Q9P2J9	529 aa		12.83	□□□□□ -0.36
SSBP2-215	ENST00000512098	RCOR3	Q9P2K3	495 aa	Predicted RBP	12.83	□□□□□ -0.36
SSBP2-215	ENST00000512098	VPS28	Q9UK41	221 aa		12.83	□□□□□ -0.36
SSBP2-215	ENST00000512098	CROT	Q9UKG9	612 aa		12.83	□□□□□ -0.36
SSBP2-215	ENST00000512098	COL6A5	A8TX70	2615 aa		12.83	□□□□□ -0.36
SSBP2-215	ENST00000512098	CDC14C	A4D256	554 aa		12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	KRT86	O43790	486 aa		12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	EXOC3	O60645	756 aa		12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	BMP15	O95972	392 aa		12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	MOCS2	O96007	188 aa	Predicted RBP	12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	TNF	P01375	233 aa		12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	HLA-DRA	P01903	254 aa		12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	CD1E	P15812	388 aa		12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	NFKBIA	P25963	317 aa		12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	HTR1B	P28222	390 aa		12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	ALDH4A1	P30038	563 aa		12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	DLST	P36957	453 aa		12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	ITGA1	P56199	1179 aa		12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	BST2	Q10589	180 aa	Known RBP	12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	NFATC4	Q14934	902 aa		12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	RRAGB	Q5VZM2	374 aa		12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	SLC6A19	Q695T7	634 aa		12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	SPECC1L	Q69YQ0	1117 aa		12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	ENPP7	Q6UWV6	458 aa		12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	DPY19L3	Q6ZPD9	716 aa		12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	TAF8	Q7Z7C8	310 aa		12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	TTC39C	Q8N584	583 aa		12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	TP53I13	Q8NBR0	393 aa	Predicted RBP	12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	ATL2	Q8NHH9	583 aa		12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	DQX1	Q8TE96	717 aa	Known RBP	12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	BTN2A3P	Q96KV6	586 aa		12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	PRMT1	Q99873	361 aa	Known RBP	12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	REPIN1	Q9BWE0	567 aa	Known RBP	12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	BACH2	Q9BYV9	841 aa		12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	IMPG2	Q9BZV3	1241 aa		12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	NIF3L1	Q9GZT8	377 aa		12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	MBNL1	Q9NR56	388 aa	Known RBP	12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	ASF1B	Q9NVP2	202 aa		12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	LUZP4	Q9P127	313 aa		12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	TFIP11	Q9UBB9	837 aa	Known RBP	12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	KLF2	Q9Y5W3	355 aa	Predicted RBP	12.82	□□□□□ -0.36
SSBP2-215	ENST00000512098	FN1	P02751	2386 aa	Known RBP	12.81	□□□□□ -0.36
SSBP2-215	ENST00000512098		A6NCN8	305 aa		12.81	□□□□□ -0.36
SSBP2-215	ENST00000512098		B4DGG1	531 aa		12.81	□□□□□ -0.36
SSBP2-215	ENST00000512098	BHMG1	C9JSJ3	638 aa	Predicted RBP	12.81	□□□□□ -0.36
SSBP2-215	ENST00000512098	IKBKB	O14920	756 aa		12.81	□□□□□ -0.36
SSBP2-215	ENST00000512098	SMAD6	O43541	496 aa	Known RBP	12.81	□□□□□ -0.36
SSBP2-215	ENST00000512098	CD2BP2	O95400	341 aa	Known RBP	12.81	□□□□□ -0.36
SSBP2-215	ENST00000512098	APOE	P02649	317 aa		12.81	□□□□□ -0.36
SSBP2-215	ENST00000512098	LTF	P02788	710 aa		12.81	□□□□□ -0.36
SSBP2-215	ENST00000512098	DRD2	P14416	443 aa		12.81	□□□□□ -0.36
SSBP2-215	ENST00000512098	PIK3CA	P42336	1068 aa		12.81	□□□□□ -0.36
SSBP2-215	ENST00000512098	ABL2	P42684	1182 aa		12.81	□□□□□ -0.36
SSBP2-215	ENST00000512098	NOP2	P46087	812 aa	Known RBP	12.81	□□□□□ -0.36
SSBP2-215	ENST00000512098	RAD23B	P54727	409 aa		12.81	□□□□□ -0.36
SSBP2-215	ENST00000512098	DLG4	P78352	724 aa		12.81	□□□□□ -0.36
SSBP2-215	ENST00000512098	KRT83	P78385	493 aa		12.81	□□□□□ -0.36
SSBP2-215	ENST00000512098	DPYD	Q12882	1025 aa		12.81	□□□□□ -0.36
SSBP2-215	ENST00000512098	ART3	Q13508	389 aa		12.81	□□□□□ -0.36
SSBP2-215	ENST00000512098	EFHC1	Q5JVL4	640 aa		12.81	□□□□□ -0.36
SSBP2-215	ENST00000512098	RABGAP1L	Q5R372	815 aa		12.81	□□□□□ -0.36
SSBP2-215	ENST00000512098	LYSMD3	Q7Z3D4	306 aa		12.81	□□□□□ -0.36
SSBP2-215	ENST00000512098	CIR1	Q86X95	450 aa	Predicted RBP	12.81	□□□□□ -0.36
SSBP2-215	ENST00000512098	KIAA1524	Q8TCG1	905 aa		12.81	□□□□□ -0.36
SSBP2-215	ENST00000512098	ARHGEF26	Q96DR7	871 aa		12.81	□□□□□ -0.36
SSBP2-215	ENST00000512098	BARD1	Q99728	777 aa	Known RBP	12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms