RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 SETMARQ53H47 684 aaPredicted RBP14.13□□□□□ -0.15
DDX41-212ENST00000511040 PRAMEF14Q5SWL7 426 aa14.13□□□□□ -0.15
DDX41-212ENST00000511040 LRRC38Q5VT99 294 aa14.13□□□□□ -0.15
DDX41-212ENST00000511040 NAPEPLDQ6IQ20 393 aa14.13□□□□□ -0.15
DDX41-212ENST00000511040 NEK5Q6P3R8 708 aa14.13□□□□□ -0.15
DDX41-212ENST00000511040 MFSD7Q6UXD7 560 aa14.13□□□□□ -0.15
DDX41-212ENST00000511040 DAAM2Q86T65 1068 aa14.13□□□□□ -0.15
DDX41-212ENST00000511040 ZSWIM9Q86XI8 627 aa14.13□□□□□ -0.15
DDX41-212ENST00000511040 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.13□□□□□ -0.15
DDX41-212ENST00000511040 PAF1Q8N7H5 531 aa14.13□□□□□ -0.15
DDX41-212ENST00000511040 TPCN2Q8NHX9 752 aa14.13□□□□□ -0.15
DDX41-212ENST00000511040 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.13□□□□□ -0.15
DDX41-212ENST00000511040 NSMCE1Q8WV22 266 aa14.13□□□□□ -0.15
DDX41-212ENST00000511040 MAK16Q9BXY0 300 aaKnown RBP14.13□□□□□ -0.15
DDX41-212ENST00000511040 CPEB1Q9BZB8 566 aaKnown RBP14.13□□□□□ -0.15
DDX41-212ENST00000511040 ZDHHC5Q9C0B5 715 aa14.13□□□□□ -0.15
DDX41-212ENST00000511040 SUV39H2Q9H5I1 410 aa14.13□□□□□ -0.15
DDX41-212ENST00000511040 DDX56Q9NY93 547 aaKnown RBP14.13□□□□□ -0.15
DDX41-212ENST00000511040 TRIM10Q9UDY6 481 aa14.13□□□□□ -0.15
DDX41-212ENST00000511040 HEY1Q9Y5J3 304 aa14.13□□□□□ -0.15
DDX41-212ENST00000511040 CACNA1EQ15878 2313 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 DCHS1Q96JQ0 3298 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 A0A1W2PR77 199 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 IGLON5A6NGN9 336 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 APOL1O14791 398 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 VILLO15195 856 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 PSTPIP1O43586 416 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 AP1G1O43747 822 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 XPAP23025 273 aaPredicted RBP14.12□□□□□ -0.15
DDX41-212ENST00000511040 CD38P28907 300 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 MMP13P45452 471 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 CSNK1DP48730 415 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 RENBPP51606 427 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 VAV2P52735 878 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 CLDN2P57739 230 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 RPS21P63220 83 aaKnown RBP14.12□□□□□ -0.15
DDX41-212ENST00000511040 IL9RQ01113 521 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 FGL2Q14314 439 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 TMEM259Q4ZIN3 620 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 PPM1JQ5JR12 505 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 FAM182AQ5T1J6 154 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 CFAP58Q5T655 872 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 MARC1Q5VT66 337 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 C11orf63Q6NUN7 778 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 NPNTQ6UXI9 565 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 B4GALNT4Q76KP1 1039 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 PLD5Q8N7P1 536 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 KRT35Q92764 455 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 RAB7BQ96AH8 199 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 FEM1CQ96JP0 617 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 PSKH2Q96QS6 385 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 WRAP53Q9BUR4 548 aaKnown RBP14.12□□□□□ -0.15
DDX41-212ENST00000511040 ATP13A3Q9H7F0 1226 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 NT5MQ9NPB1 228 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 SCUBE2Q9NQ36 999 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 DNAAF2Q9NVR5 837 aaKnown RBP14.12□□□□□ -0.15
DDX41-212ENST00000511040 DTLQ9NZJ0 730 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 DKK3Q9UBP4 350 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 TPX2Q9ULW0 747 aaKnown RBP14.12□□□□□ -0.15
DDX41-212ENST00000511040 DMTF1Q9Y222 760 aa14.12□□□□□ -0.15
DDX41-212ENST00000511040 ASCC3Q8N3C0 2202 aaKnown RBP14.11□□□□□ -0.15
DDX41-212ENST00000511040 PRAMEF26H0Y7S4 382 aa14.11□□□□□ -0.15
DDX41-212ENST00000511040 H0Y8X5 98 aa14.11□□□□□ -0.15
DDX41-212ENST00000511040 GIPC1O14908 333 aa14.11□□□□□ -0.15
DDX41-212ENST00000511040 AREL1O15033 823 aa14.11□□□□□ -0.15
DDX41-212ENST00000511040 RAD51BO15315 384 aa14.11□□□□□ -0.15
DDX41-212ENST00000511040 TSPAN6O43657 245 aa14.11□□□□□ -0.15
DDX41-212ENST00000511040 MMP20O60882 483 aa14.11□□□□□ -0.15
DDX41-212ENST00000511040 CER1O95813 267 aa14.11□□□□□ -0.15
DDX41-212ENST00000511040 KRT10P13645 584 aa14.11□□□□□ -0.15
DDX41-212ENST00000511040 SERPINA4P29622 427 aa14.11□□□□□ -0.15
DDX41-212ENST00000511040 CTSKP43235 329 aa14.11□□□□□ -0.15
DDX41-212ENST00000511040 BCL2L1Q07817 233 aa14.11□□□□□ -0.15
DDX41-212ENST00000511040 NSUN2Q08J23 767 aaKnown RBP eCLIP14.11□□□□□ -0.15
DDX41-212ENST00000511040 STAT4Q14765 748 aa14.11□□□□□ -0.15
DDX41-212ENST00000511040 GRM3Q14832 879 aa14.11□□□□□ -0.15
DDX41-212ENST00000511040 IFI16Q16666 785 aaKnown RBP14.11□□□□□ -0.15
DDX41-212ENST00000511040 SLC45A4Q5BKX6 768 aa14.11□□□□□ -0.15
DDX41-212ENST00000511040 KAZNQ674X7 775 aa14.11□□□□□ -0.15
DDX41-212ENST00000511040 KIAA1161Q6NSJ0 714 aa14.11□□□□□ -0.15
DDX41-212ENST00000511040 IL27RAQ6UWB1 636 aa14.11□□□□□ -0.15
DDX41-212ENST00000511040 BBS5Q8N3I7 341 aa14.11□□□□□ -0.15
DDX41-212ENST00000511040 CCNYQ8ND76 341 aa14.11□□□□□ -0.15
DDX41-212ENST00000511040 DEFB124Q8NES8 71 aa14.11□□□□□ -0.15
DDX41-212ENST00000511040 TMEM131Q92545 1883 aa14.11□□□□□ -0.15
DDX41-212ENST00000511040 ZNF641Q96N77 438 aaPredicted RBP14.11□□□□□ -0.15
DDX41-212ENST00000511040 CAMK1GQ96NX5 476 aa14.11□□□□□ -0.15
DDX41-212ENST00000511040 TUBGCP5Q96RT8 1024 aa14.11□□□□□ -0.15
DDX41-212ENST00000511040 TRPM6Q9BX84 2022 aa14.11□□□□□ -0.15
DDX41-212ENST00000511040 SLC17A9Q9BYT1 436 aa14.11□□□□□ -0.15
DDX41-212ENST00000511040 NOD2Q9HC29 1040 aa14.11□□□□□ -0.15
DDX41-212ENST00000511040 PCDH12Q9NPG4 1184 aa14.11□□□□□ -0.15
DDX41-212ENST00000511040 TTLL3Q9Y4R7 772 aa14.11□□□□□ -0.15
DDX41-212ENST00000511040 ANKRD36A6QL64 1941 aa14.1□□□□□ -0.15
DDX41-212ENST00000511040 TSPAN11A1L157 253 aa14.1□□□□□ -0.15
DDX41-212ENST00000511040 MACROD2A1Z1Q3 448 aa14.1□□□□□ -0.15
DDX41-212ENST00000511040 UPK3BL1B0FP48 263 aa14.1□□□□□ -0.15
DDX41-212ENST00000511040 ZNF487B1APH4 448 aa14.1□□□□□ -0.15
DDX41-212ENST00000511040 UPK3BL2E5RIL1 263 aa14.1□□□□□ -0.15
DDX41-212ENST00000511040 TLR4O00206 839 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms