RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 FAM228BP0C875 321 aa23.24■■□□□ 1.31
SNF8-209ENST00000510558 TIMP2P16035 220 aa23.24■■□□□ 1.31
SNF8-209ENST00000510558 DGKAP23743 735 aa23.24■■□□□ 1.31
SNF8-209ENST00000510558 HCAR3P49019 387 aa23.24■■□□□ 1.31
SNF8-209ENST00000510558 ACADVLP49748 655 aa23.24■■□□□ 1.31
SNF8-209ENST00000510558 DPYSQ14117 519 aa23.24■■□□□ 1.31
SNF8-209ENST00000510558 SMAD1Q15797 465 aaKnown RBP23.24■■□□□ 1.31
SNF8-209ENST00000510558 SLC25A45Q8N413 288 aa23.24■■□□□ 1.31
SNF8-209ENST00000510558 DENND6BQ8NEG7 585 aa23.24■■□□□ 1.31
SNF8-209ENST00000510558 TSC1Q92574 1164 aa23.24■■□□□ 1.31
SNF8-209ENST00000510558 IFT43Q96FT9 208 aa23.24■■□□□ 1.31
SNF8-209ENST00000510558 CAAP1Q9H8G2 361 aa23.24■■□□□ 1.31
SNF8-209ENST00000510558 ASPMQ8IZT6 3477 aa23.24■■□□□ 1.31
SNF8-209ENST00000510558 DFFAO00273 331 aa23.23■■□□□ 1.31
SNF8-209ENST00000510558 PIAS2O75928 621 aa23.23■■□□□ 1.31
SNF8-209ENST00000510558 C1SP09871 688 aa23.23■■□□□ 1.31
SNF8-209ENST00000510558 TCF4P15884 667 aa23.23■■□□□ 1.31
SNF8-209ENST00000510558 ITIH2P19823 946 aa23.23■■□□□ 1.31
SNF8-209ENST00000510558 RABIFP47224 123 aa23.23■■□□□ 1.31
SNF8-209ENST00000510558 PIGHQ14442 188 aaPredicted RBP23.23■■□□□ 1.31
SNF8-209ENST00000510558 GRM3Q14832 879 aa23.23■■□□□ 1.31
SNF8-209ENST00000510558 DPYSL2Q16555 572 aa23.23■■□□□ 1.31
SNF8-209ENST00000510558 SMTNL2Q2TAL5 461 aa23.23■■□□□ 1.31
SNF8-209ENST00000510558 MARCH9Q86YJ5 346 aa23.23■■□□□ 1.31
SNF8-209ENST00000510558 ZWILCHQ9H900 591 aa23.23■■□□□ 1.31
SNF8-209ENST00000510558 SP110Q9HB58 689 aa23.23■■□□□ 1.31
SNF8-209ENST00000510558 UCKL1Q9NWZ5 548 aa23.23■■□□□ 1.31
SNF8-209ENST00000510558 H3BRJ5 948 aa23.22■■□□□ 1.31
SNF8-209ENST00000510558 TRIM38O00635 465 aa23.22■■□□□ 1.31
SNF8-209ENST00000510558 MMP20O60882 483 aa23.22■■□□□ 1.31
SNF8-209ENST00000510558 CAPNS1P04632 268 aa23.22■■□□□ 1.31
SNF8-209ENST00000510558 RGRP47804 291 aa23.22■■□□□ 1.31
SNF8-209ENST00000510558 NFKBIBQ15653 356 aa23.22■■□□□ 1.31
SNF8-209ENST00000510558 BOLA3Q53S33 107 aa23.22■■□□□ 1.31
SNF8-209ENST00000510558 ARHGAP36Q6ZRI8 547 aa23.22■■□□□ 1.31
SNF8-209ENST00000510558 TSEN2Q8NCE0 465 aaKnown RBP23.22■■□□□ 1.31
SNF8-209ENST00000510558 CXorf40AQ8TE69 158 aa23.22■■□□□ 1.31
SNF8-209ENST00000510558 HSPH1Q92598 858 aa23.22■■□□□ 1.31
SNF8-209ENST00000510558 BTBD6Q96KE9 485 aa23.22■■□□□ 1.31
SNF8-209ENST00000510558 NUP85Q9BW27 656 aa23.22■■□□□ 1.31
SNF8-209ENST00000510558 XPO4Q9C0E2 1151 aaKnown RBP23.22■■□□□ 1.31
SNF8-209ENST00000510558 SUV39H2Q9H5I1 410 aa23.22■■□□□ 1.31
SNF8-209ENST00000510558 DNAJC28Q9NX36 388 aa23.22■■□□□ 1.31
SNF8-209ENST00000510558 ANAPC7Q9UJX3 599 aa23.22■■□□□ 1.31
SNF8-209ENST00000510558 SPTY2D1-AS1A0A0U1RR47 76 aa23.21■■□□□ 1.31
SNF8-209ENST00000510558 TSPAN11A1L157 253 aa23.21■■□□□ 1.31
SNF8-209ENST00000510558 FAM149AA5PLN7 773 aa23.21■■□□□ 1.31
SNF8-209ENST00000510558 SRRM3A6NNA2 597 aaPredicted RBP23.21■■□□□ 1.31
SNF8-209ENST00000510558 SIGLEC6O43699 453 aa23.21■■□□□ 1.31
SNF8-209ENST00000510558 PALMO75781 387 aa23.21■■□□□ 1.31
SNF8-209ENST00000510558 TM7SF2O76062 418 aa23.21■■□□□ 1.31
SNF8-209ENST00000510558 CYP1A2P05177 515 aa23.21■■□□□ 1.31
SNF8-209ENST00000510558 CDK4P11802 303 aa23.21■■□□□ 1.31
SNF8-209ENST00000510558 CKMT2P17540 419 aa23.21■■□□□ 1.31
SNF8-209ENST00000510558 XPAP23025 273 aaPredicted RBP23.21■■□□□ 1.31
SNF8-209ENST00000510558 CASP14P31944 242 aa23.21■■□□□ 1.31
SNF8-209ENST00000510558 ARL4AP40617 200 aa23.21■■□□□ 1.31
SNF8-209ENST00000510558 SUOXP51687 545 aa23.21■■□□□ 1.31
SNF8-209ENST00000510558 PFN3P60673 137 aa23.21■■□□□ 1.31
SNF8-209ENST00000510558 IL10RBQ08334 325 aa23.21■■□□□ 1.31
SNF8-209ENST00000510558 ZNF211Q13398 564 aaPredicted RBP23.21■■□□□ 1.31
SNF8-209ENST00000510558 FZD2Q14332 565 aa23.21■■□□□ 1.31
SNF8-209ENST00000510558 SKOR2Q2VWA4 1001 aaPredicted RBP23.21■■□□□ 1.31
SNF8-209ENST00000510558 PROX2Q3B8N5 592 aa23.21■■□□□ 1.31
SNF8-209ENST00000510558 ZNF542PQ5EBM4 170 aa23.21■■□□□ 1.31
SNF8-209ENST00000510558 ALKBH5Q6P6C2 394 aaKnown RBP23.21■■□□□ 1.31
SNF8-209ENST00000510558 KDM7AQ6ZMT4 941 aa23.21■■□□□ 1.31
SNF8-209ENST00000510558 LZTR1Q8N653 840 aa23.21■■□□□ 1.31
SNF8-209ENST00000510558 NIPA2Q8N8Q9 360 aa23.21■■□□□ 1.31
SNF8-209ENST00000510558 OR4C6Q8NH72 309 aa23.21■■□□□ 1.31
SNF8-209ENST00000510558 HCAR2Q8TDS4 363 aa23.21■■□□□ 1.31
SNF8-209ENST00000510558 TUBGCP5Q96RT8 1024 aa23.21■■□□□ 1.31
SNF8-209ENST00000510558 CINPQ9BW66 212 aaPredicted RBP23.21■■□□□ 1.31
SNF8-209ENST00000510558 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.21■■□□□ 1.31
SNF8-209ENST00000510558 IP6K2Q9UHH9 426 aa23.21■■□□□ 1.31
SNF8-209ENST00000510558 IPO11Q9UI26 975 aaKnown RBP23.21■■□□□ 1.31
SNF8-209ENST00000510558 KNTC1P50748 2209 aa23.2■■□□□ 1.3
SNF8-209ENST00000510558 FFAR2O15552 330 aa23.2■■□□□ 1.3
SNF8-209ENST00000510558 TPM3P06753 285 aa23.2■■□□□ 1.3
SNF8-209ENST00000510558 IGFALSP35858 605 aa23.2■■□□□ 1.3
SNF8-209ENST00000510558 CSNK1DP48730 415 aa23.2■■□□□ 1.3
SNF8-209ENST00000510558 ELP6Q0PNE2 266 aa23.2■■□□□ 1.3
SNF8-209ENST00000510558 PDE1CQ14123 709 aaPredicted RBP23.2■■□□□ 1.3
SNF8-209ENST00000510558 HS1BP3Q53T59 392 aa23.2■■□□□ 1.3
SNF8-209ENST00000510558 CCDC122Q5T0U0 273 aa23.2■■□□□ 1.3
SNF8-209ENST00000510558 TXNRD3NBQ6F5E7 133 aa23.2■■□□□ 1.3
SNF8-209ENST00000510558 POLNQ7Z5Q5 900 aa23.2■■□□□ 1.3
SNF8-209ENST00000510558 SRLQ86TD4 932 aa23.2■■□□□ 1.3
SNF8-209ENST00000510558 PARGQ86W56 976 aa23.2■■□□□ 1.3
SNF8-209ENST00000510558 TMPRSS12Q86WS5 348 aa23.2■■□□□ 1.3
SNF8-209ENST00000510558 TP53INP2Q8IXH6 220 aa23.2■■□□□ 1.3
SNF8-209ENST00000510558 CENPTQ96BT3 561 aa23.2■■□□□ 1.3
SNF8-209ENST00000510558 ZNF641Q96N77 438 aaPredicted RBP23.2■■□□□ 1.3
SNF8-209ENST00000510558 WRAP53Q9BUR4 548 aaKnown RBP23.2■■□□□ 1.3
SNF8-209ENST00000510558 C1QTNF7Q9BXJ2 289 aa23.2■■□□□ 1.3
SNF8-209ENST00000510558 CCDC86Q9H6F5 360 aaKnown RBP23.2■■□□□ 1.3
SNF8-209ENST00000510558 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.2■■□□□ 1.3
SNF8-209ENST00000510558 SHROOM3Q8TF72 1996 aa23.2■■□□□ 1.3
SNF8-209ENST00000510558 MYLKQ15746 1914 aa23.2■■□□□ 1.3
SNF8-209ENST00000510558 BUB1BO60566 1050 aaPredicted RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms