RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 RABIFP47224 123 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 RENBPP51606 427 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 CLDN2P57739 230 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 DPYSQ14117 519 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 SLC18A3Q16572 532 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 CCDC157Q569K6 752 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 TMCO4Q5TGY1 634 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 AFMIDQ63HM1 303 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 ERAP2Q6P179 960 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 KYAT3Q6YP21 454 aaKnown RBP18.87■□□□□ 0.61
UBE3D-207ENST00000509102 GCNT7Q6ZNI0 430 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 Q6ZSR6 202 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 H2AFVQ71UI9 128 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 ABI3BPQ7Z7G0 1075 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 SLCO6A1Q86UG4 719 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 BBS5Q8N3I7 341 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 GALNT15Q8N3T1 639 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 EID2Q8N6I1 236 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 NETO2Q8NC67 525 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 RNF214Q8ND24 703 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 DENND6BQ8NEG7 585 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 OR13H1Q8NG92 308 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 NSMCE1Q8WV22 266 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 IFT43Q96FT9 208 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 CNDP2Q96KP4 475 aaKnown RBP18.87■□□□□ 0.61
UBE3D-207ENST00000509102 ZNF599Q96NL3 588 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 LENG8Q96PV6 779 aaPredicted RBP18.87■□□□□ 0.61
UBE3D-207ENST00000509102 ANP32EQ9BTT0 268 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 C1QTNF2Q9BXJ5 285 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 UVRAGQ9P2Y5 699 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 EPG5Q9HCE0 2579 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 ENC1O14682 589 aa18.86■□□□□ 0.61
UBE3D-207ENST00000509102 AREL1O15033 823 aa18.86■□□□□ 0.61
UBE3D-207ENST00000509102 TM7SF2O76062 418 aa18.86■□□□□ 0.61
UBE3D-207ENST00000509102 RARAP10276 462 aa18.86■□□□□ 0.61
UBE3D-207ENST00000509102 IL1R2P27930 398 aa18.86■□□□□ 0.61
UBE3D-207ENST00000509102 CSNK1DP48730 415 aa18.86■□□□□ 0.61
UBE3D-207ENST00000509102 SHBQ15464 509 aa18.86■□□□□ 0.61
UBE3D-207ENST00000509102 BRAT1Q6PJG6 821 aa18.86■□□□□ 0.61
UBE3D-207ENST00000509102 POLNQ7Z5Q5 900 aa18.86■□□□□ 0.61
UBE3D-207ENST00000509102 NPWQ8N729 165 aa18.86■□□□□ 0.61
UBE3D-207ENST00000509102 BTBD6Q96KE9 485 aa18.86■□□□□ 0.61
UBE3D-207ENST00000509102 CSPG4P5Q96PW8 444 aa18.86■□□□□ 0.61
UBE3D-207ENST00000509102 DNAJC7Q99615 494 aa18.86■□□□□ 0.61
UBE3D-207ENST00000509102 SUV39H2Q9H5I1 410 aa18.86■□□□□ 0.61
UBE3D-207ENST00000509102 RCOR3Q9P2K3 495 aaPredicted RBP18.86■□□□□ 0.61
UBE3D-207ENST00000509102 SEPT3Q9UH03 358 aa18.86■□□□□ 0.61
UBE3D-207ENST00000509102 ITM2BQ9Y287 266 aa18.86■□□□□ 0.61
UBE3D-207ENST00000509102 TRPM6Q9BX84 2022 aa18.86■□□□□ 0.61
UBE3D-207ENST00000509102 SSU72P8A0A1W2PR75 194 aa18.85■□□□□ 0.61
UBE3D-207ENST00000509102 FAM221BA6H8Z2 402 aa18.85■□□□□ 0.61
UBE3D-207ENST00000509102 C1QTNF9BB2RNN3 333 aa18.85■□□□□ 0.61
UBE3D-207ENST00000509102 H3BM21 787 aa18.85■□□□□ 0.61
UBE3D-207ENST00000509102 PIGNO95427 931 aa18.85■□□□□ 0.61
UBE3D-207ENST00000509102 C1QTNF9P0C862 333 aa18.85■□□□□ 0.61
UBE3D-207ENST00000509102 ALPPL2P10696 532 aa18.85■□□□□ 0.61
UBE3D-207ENST00000509102 CDH6P55285 790 aa18.85■□□□□ 0.61
UBE3D-207ENST00000509102 BCL2L1Q07817 233 aa18.85■□□□□ 0.61
UBE3D-207ENST00000509102 NSUN2Q08J23 767 aaKnown RBP eCLIP18.85■□□□□ 0.61
UBE3D-207ENST00000509102 BNIP3Q12983 259 aa18.85■□□□□ 0.61
UBE3D-207ENST00000509102 ZNF235Q14590 738 aa18.85■□□□□ 0.61
UBE3D-207ENST00000509102 SRLQ86TD4 932 aa18.85■□□□□ 0.61
UBE3D-207ENST00000509102 VSTM4Q8IW00 320 aa18.85■□□□□ 0.61
UBE3D-207ENST00000509102 ARHGAP12Q8IWW6 846 aa18.85■□□□□ 0.61
UBE3D-207ENST00000509102 ATPAF2Q8N5M1 289 aa18.85■□□□□ 0.61
UBE3D-207ENST00000509102 TSEN2Q8NCE0 465 aaKnown RBP18.85■□□□□ 0.61
UBE3D-207ENST00000509102 CCDC42Q96M95 316 aa18.85■□□□□ 0.61
UBE3D-207ENST00000509102 PCDHGA1Q9Y5H4 931 aa18.85■□□□□ 0.61
UBE3D-207ENST00000509102 NEMP2A6NFY4 417 aa18.84■□□□□ 0.61
UBE3D-207ENST00000509102 INSIG1O15503 277 aa18.84■□□□□ 0.61
UBE3D-207ENST00000509102 SDC3O75056 442 aa18.84■□□□□ 0.61
UBE3D-207ENST00000509102 C1SP09871 688 aa18.84■□□□□ 0.61
UBE3D-207ENST00000509102 TIMP2P16035 220 aa18.84■□□□□ 0.61
UBE3D-207ENST00000509102 AMPD1P23109 780 aa18.84■□□□□ 0.61
UBE3D-207ENST00000509102 HSPA9P38646 679 aaKnown RBP18.84■□□□□ 0.61
UBE3D-207ENST00000509102 THOP1P52888 689 aa18.84■□□□□ 0.61
UBE3D-207ENST00000509102 AP1S1P61966 158 aa18.84■□□□□ 0.61
UBE3D-207ENST00000509102 HNRNPKP61978 463 aaKnown RBP eCLIP18.84■□□□□ 0.61
UBE3D-207ENST00000509102 POLR2LP62875 67 aaKnown RBP18.84■□□□□ 0.61
UBE3D-207ENST00000509102 SLC25A11Q02978 314 aaKnown RBP18.84■□□□□ 0.61
UBE3D-207ENST00000509102 PTK2BQ14289 1009 aa18.84■□□□□ 0.61
UBE3D-207ENST00000509102 LBRQ14739 615 aaKnown RBP18.84■□□□□ 0.61
UBE3D-207ENST00000509102 UGP2Q16851 508 aa18.84■□□□□ 0.61
UBE3D-207ENST00000509102 LRRC73Q5JTD7 316 aa18.84■□□□□ 0.61
UBE3D-207ENST00000509102 ZFYVE27Q5T4F4 411 aa18.84■□□□□ 0.61
UBE3D-207ENST00000509102 PARGQ86W56 976 aa18.84■□□□□ 0.61
UBE3D-207ENST00000509102 CNGA4Q8IV77 575 aa18.84■□□□□ 0.61
UBE3D-207ENST00000509102 MAP7D3Q8IWC1 876 aa18.84■□□□□ 0.61
UBE3D-207ENST00000509102 WRAP53Q9BUR4 548 aaKnown RBP18.84■□□□□ 0.61
UBE3D-207ENST00000509102 PCDH18Q9HCL0 1135 aa18.84■□□□□ 0.61
UBE3D-207ENST00000509102 ABHD10Q9NUJ1 306 aa18.84■□□□□ 0.61
UBE3D-207ENST00000509102 DNAJC28Q9NX36 388 aa18.84■□□□□ 0.61
UBE3D-207ENST00000509102 TOR4AQ9NXH8 423 aa18.84■□□□□ 0.61
UBE3D-207ENST00000509102 GGT7Q9UJ14 662 aa18.84■□□□□ 0.61
UBE3D-207ENST00000509102 POM121BA6NF01 834 aa18.83■□□□□ 0.6
UBE3D-207ENST00000509102 TOR1BO14657 336 aa18.83■□□□□ 0.6
UBE3D-207ENST00000509102 MMP20O60882 483 aa18.83■□□□□ 0.6
UBE3D-207ENST00000509102 KRT7P08729 469 aa18.83■□□□□ 0.6
UBE3D-207ENST00000509102 TCF4P15884 667 aa18.83■□□□□ 0.6
UBE3D-207ENST00000509102 NFKBIAP25963 317 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms