RNA–Protein interactions for RNA: ENST00000508604.5

NUP54-208, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-208ENST00000508604 OR4N2Q8NGD1 307 aa2.88□□□□□ -1.95
NUP54-208ENST00000508604 KIAA1191Q96A73 305 aa2.88□□□□□ -1.95
NUP54-208ENST00000508604 ZNF501Q96CX3 271 aaPredicted RBP2.88□□□□□ -1.95
NUP54-208ENST00000508604 TTC14Q96N46 770 aa2.88□□□□□ -1.95
NUP54-208ENST00000508604 F2RL3Q96RI0 385 aa2.88□□□□□ -1.95
NUP54-208ENST00000508604 RTKNQ9BST9 563 aa2.88□□□□□ -1.95
NUP54-208ENST00000508604 NDUFAF4Q9P032 175 aa2.88□□□□□ -1.95
NUP54-208ENST00000508604 TAAR2Q9P1P5 351 aa2.88□□□□□ -1.95
NUP54-208ENST00000508604 C19orf53Q9UNZ5 99 aaPredicted RBP2.88□□□□□ -1.95
NUP54-208ENST00000508604 ZNF711Q9Y462 761 aa2.88□□□□□ -1.95
NUP54-208ENST00000508604 IGKV6D-41A0A0C4DH26 115 aa2.87□□□□□ -1.95
NUP54-208ENST00000508604 J3KR12 359 aa2.87□□□□□ -1.95
NUP54-208ENST00000508604 SYT5O00445 386 aa2.87□□□□□ -1.95
NUP54-208ENST00000508604 CAPN9O14815 690 aa2.87□□□□□ -1.95
NUP54-208ENST00000508604 BAG4O95429 457 aaKnown RBP2.87□□□□□ -1.95
NUP54-208ENST00000508604 ITGA2BP08514 1039 aa2.87□□□□□ -1.95
NUP54-208ENST00000508604 MYL3P08590 195 aa2.87□□□□□ -1.95
NUP54-208ENST00000508604 FGF5P12034 268 aa2.87□□□□□ -1.95
NUP54-208ENST00000508604 AZU1P20160 251 aa2.87□□□□□ -1.95
NUP54-208ENST00000508604 SERPINA4P29622 427 aa2.87□□□□□ -1.95
NUP54-208ENST00000508604 DRG2P55039 364 aaKnown RBP2.87□□□□□ -1.95
NUP54-208ENST00000508604 OASLQ15646 514 aaKnown RBP2.87□□□□□ -1.95
NUP54-208ENST00000508604 ATP13A5Q4VNC0 1218 aa2.87□□□□□ -1.95
NUP54-208ENST00000508604 SLC9B2Q86UD5 537 aa2.87□□□□□ -1.95
NUP54-208ENST00000508604 NFE4Q86UQ8 179 aa2.87□□□□□ -1.95
NUP54-208ENST00000508604 KRTAP7-1Q8IUC3 87 aa2.87□□□□□ -1.95
NUP54-208ENST00000508604 SYTL1Q8IYJ3 562 aa2.87□□□□□ -1.95
NUP54-208ENST00000508604 CADM4Q8NFZ8 388 aa2.87□□□□□ -1.95
NUP54-208ENST00000508604 CREB3L4Q8TEY5 395 aa2.87□□□□□ -1.95
NUP54-208ENST00000508604 C18orf8Q96DM3 657 aa2.87□□□□□ -1.95
NUP54-208ENST00000508604 CSF3RQ99062 836 aa2.87□□□□□ -1.95
NUP54-208ENST00000508604 PYGO2Q9BRQ0 406 aa2.87□□□□□ -1.95
NUP54-208ENST00000508604 SARGQ9BW04 601 aa2.87□□□□□ -1.95
NUP54-208ENST00000508604 NAA15Q9BXJ9 866 aaKnown RBP2.87□□□□□ -1.95
NUP54-208ENST00000508604 LRRC4Q9HBW1 653 aa2.87□□□□□ -1.95
NUP54-208ENST00000508604 OBSCNQ5VST9 7968 aa2.86□□□□□ -1.95
NUP54-208ENST00000508604 CPED1A4D0V7 1026 aa2.86□□□□□ -1.95
NUP54-208ENST00000508604 HBP1O60381 514 aa2.86□□□□□ -1.95
NUP54-208ENST00000508604 CTPS1P17812 591 aa2.86□□□□□ -1.95
NUP54-208ENST00000508604 CHAF1AQ13111 956 aaPredicted RBP2.86□□□□□ -1.95
NUP54-208ENST00000508604 PPIGQ13427 754 aaKnown RBP eCLIP2.86□□□□□ -1.95
NUP54-208ENST00000508604 LONRF1Q17RB8 773 aa2.86□□□□□ -1.95
NUP54-208ENST00000508604 DGAT2L7PQ6IED9 249 aa2.86□□□□□ -1.95
NUP54-208ENST00000508604 CCNI2Q6ZMN8 369 aaPredicted RBP2.86□□□□□ -1.95
NUP54-208ENST00000508604 STXBP4Q6ZWJ1 553 aa2.86□□□□□ -1.95
NUP54-208ENST00000508604 SFTPA2Q8IWL1 248 aa2.86□□□□□ -1.95
NUP54-208ENST00000508604 FSIP1Q8NA03 581 aa2.86□□□□□ -1.95
NUP54-208ENST00000508604 NCSTNQ92542 709 aa2.86□□□□□ -1.95
NUP54-208ENST00000508604 C3orf49Q96BT1 292 aa2.86□□□□□ -1.95
NUP54-208ENST00000508604 CCDC138Q96M89 665 aa2.86□□□□□ -1.95
NUP54-208ENST00000508604 CXorf56Q9H5V9 222 aa2.86□□□□□ -1.95
NUP54-208ENST00000508604 THAP1Q9NVV9 213 aa2.86□□□□□ -1.95
NUP54-208ENST00000508604 ANKRD10Q9NXR5 420 aa2.86□□□□□ -1.95
NUP54-208ENST00000508604 SRCP12931 536 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 CHN1P15882 459 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 LINC01547P58512 204 aaPredicted RBP2.85□□□□□ -1.95
NUP54-208ENST00000508604 SLC20A2Q08357 652 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 DCTN1Q14203 1278 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 AMZ1Q400G9 498 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 GALNTL6Q49A17 601 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 SYNE3Q6ZMZ3 975 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 KRBA2Q6ZNG9 492 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 MON1AQ86VX9 555 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 CCDC117Q8IWD4 279 aaPredicted RBP2.85□□□□□ -1.95
NUP54-208ENST00000508604 CIARTQ8N365 385 aaPredicted RBP2.85□□□□□ -1.95
NUP54-208ENST00000508604 FAM71BQ8TC56 605 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 DCTN5Q9BTE1 182 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 KATNAL1Q9BW62 490 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 FAM118AQ9NWS6 357 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 OGFRQ9NZT2 677 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 SLC9A2Q9UBY0 812 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.85□□□□□ -1.95
NUP54-208ENST00000508604 ASPDHA6ND91 283 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 AQP12BA6NM10 295 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 PMS2P5A8MQ11 134 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 SEPT4O43236 478 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 HSPA12AO43301 675 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 SLC25A17O43808 307 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 ZNF500O60304 480 aaPredicted RBP2.85□□□□□ -1.95
NUP54-208ENST00000508604 AVPR2P30518 371 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 PITX1P78337 314 aaPredicted RBP2.85□□□□□ -1.95
NUP54-208ENST00000508604 BYSLQ13895 437 aaKnown RBP2.85□□□□□ -1.95
NUP54-208ENST00000508604 STARD3Q14849 445 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 CCDC181Q5TID7 509 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 GHDCQ8N2G8 530 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 ARRDC2Q8TBH0 407 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 STYXQ8WUJ0 223 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 MYD88Q99836 296 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 UBXN6Q9BZV1 441 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 ATP8A2Q9NTI2 1148 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 SPATS2LQ9NUQ6 558 aaKnown RBP2.85□□□□□ -1.95
NUP54-208ENST00000508604 IFT80Q9P2H3 777 aaPredicted RBP2.85□□□□□ -1.95
NUP54-208ENST00000508604 KCNS2Q9ULS6 477 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 DAPP1Q9UN19 280 aa2.85□□□□□ -1.95
NUP54-208ENST00000508604 DVL1O14640 695 aa2.84□□□□□ -1.95
NUP54-208ENST00000508604 APAF1O14727 1248 aa2.84□□□□□ -1.95
NUP54-208ENST00000508604 MID1O15344 667 aa2.84□□□□□ -1.95
NUP54-208ENST00000508604 ZIC3O60481 467 aa2.84□□□□□ -1.95
NUP54-208ENST00000508604 RFPL2O75678 378 aa2.84□□□□□ -1.95
NUP54-208ENST00000508604 MTA2O94776 668 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms