RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 SPOCK2Q92563 424 aa11.14□□□□□ -0.63
PROM1-207ENST00000508167 FSD1LQ9BXM9 530 aa11.14□□□□□ -0.63
PROM1-207ENST00000508167 MARK1Q9P0L2 795 aa11.14□□□□□ -0.63
PROM1-207ENST00000508167 SLCO3A1Q9UIG8 710 aa11.14□□□□□ -0.63
PROM1-207ENST00000508167 ACTL7AQ9Y615 435 aa11.14□□□□□ -0.63
PROM1-207ENST00000508167 KDELR3O43731 214 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 SNX3O60493 162 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 PMPCBO75439 489 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 EPHX1P07099 455 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 DLDP09622 509 aaKnown RBP11.13□□□□□ -0.63
PROM1-207ENST00000508167 ETV4P43268 484 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 MAGEA9P43362 315 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 SLC10A7Q0GE19 358 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 PDIA2Q13087 525 aaKnown RBP11.13□□□□□ -0.63
PROM1-207ENST00000508167 STARD3Q14849 445 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 DLG2Q15700 870 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 ZNF852Q6ZMS4 543 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 ZNF783Q6ZMS7 281 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 CROCCP2Q86T23 111 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 ARHGAP12Q8IWW6 846 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 FBXO36Q8NEA4 188 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 HDAC11Q96DB2 347 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 OXNAD1Q96HP4 312 aaPredicted RBP11.13□□□□□ -0.63
PROM1-207ENST00000508167 SSU72Q9NP77 194 aaKnown RBP11.13□□□□□ -0.63
PROM1-207ENST00000508167 MATN3O15232 486 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 GCATO75600 419 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 DHRS4L1P0CG22 281 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 PPIDQ08752 370 aaKnown RBP11.13□□□□□ -0.63
PROM1-207ENST00000508167 MTM1Q13496 603 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 HIF1AQ16665 826 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 MPP5Q8N3R9 675 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 DNASE1L2Q92874 299 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 SCUBE2Q9NQ36 999 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 ARHGEF3Q9NR81 526 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 MUTYHQ9UIF7 546 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 CXorf49A8MYA2 514 aaPredicted RBP11.13□□□□□ -0.63
PROM1-207ENST00000508167 K7ERQ8 282 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 MAN2B1O00754 1011 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 MT-CO1P00395 513 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 ASLP04424 464 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 APRTP07741 180 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 CTSOP43234 321 aaPredicted RBP11.13□□□□□ -0.63
PROM1-207ENST00000508167 E2F5Q15329 346 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 FUT11Q495W5 492 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 KIAA1958Q8N8K9 716 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 GRIN3AQ8TCU5 1115 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 IFT43Q96FT9 208 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 SIGLEC10Q96LC7 697 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 TTC25Q96NG3 672 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 CACNA2D2Q9NY47 1150 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 TIMM44O43615 452 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 PRAMEF11O60813 436 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 TMCC1O94876 653 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 IGSF6O95976 241 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 GSRP00390 522 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 HLA-EP13747 358 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 TSHRP16473 764 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 PRKCHP24723 683 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 GRIA1P42261 906 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 POM121L1PQ3SYA9 428 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 ANKRD20A2Q5SQ80 823 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 ANKRD20A1Q5TYW2 823 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 ANKRD20A3Q5VUR7 823 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 DNAAF3Q8N9W5 541 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 IPMKQ8NFU5 416 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 SEMA3CQ99985 751 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 MCMBPQ9BTE3 642 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 POLR1EQ9GZS1 481 aaKnown RBP11.13□□□□□ -0.63
PROM1-207ENST00000508167 NOL6Q9H6R4 1146 aaKnown RBP11.13□□□□□ -0.63
PROM1-207ENST00000508167 PAK5Q9P286 719 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 TBK1Q9UHD2 729 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 SLC24A2Q9UI40 661 aa11.13□□□□□ -0.63
PROM1-207ENST00000508167 TCRBV9S1A1TA0A576 114 aa11.12□□□□□ -0.63
PROM1-207ENST00000508167 MAFKO60675 156 aa11.12□□□□□ -0.63
PROM1-207ENST00000508167 ZNF189O75820 626 aaPredicted RBP11.12□□□□□ -0.63
PROM1-207ENST00000508167 RPA3P35244 121 aaPredicted RBP11.12□□□□□ -0.63
PROM1-207ENST00000508167 NEK3P51956 506 aa11.12□□□□□ -0.63
PROM1-207ENST00000508167 SNRPD1P62314 119 aaKnown RBP11.12□□□□□ -0.63
PROM1-207ENST00000508167 SLC20A2Q08357 652 aa11.12□□□□□ -0.63
PROM1-207ENST00000508167 HNRNPDQ14103 355 aaKnown RBP11.12□□□□□ -0.63
PROM1-207ENST00000508167 MLF2Q15773 248 aaPredicted RBP11.12□□□□□ -0.63
PROM1-207ENST00000508167 C5orf22Q49AR2 442 aa11.12□□□□□ -0.63
PROM1-207ENST00000508167 ASTLQ6HA08 431 aaPredicted RBP11.12□□□□□ -0.63
PROM1-207ENST00000508167 PPP1R21Q6ZMI0 780 aa11.12□□□□□ -0.63
PROM1-207ENST00000508167 PCGF5Q86SE9 256 aa11.12□□□□□ -0.63
PROM1-207ENST00000508167 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.12□□□□□ -0.63
PROM1-207ENST00000508167 BANPQ8N9N5 519 aa11.12□□□□□ -0.63
PROM1-207ENST00000508167 VAT1Q99536 393 aa11.12□□□□□ -0.63
PROM1-207ENST00000508167 ZDHHC6Q9H6R6 413 aa11.12□□□□□ -0.63
PROM1-207ENST00000508167 DYRK4Q9NR20 520 aa11.12□□□□□ -0.63
PROM1-207ENST00000508167 OBSL1O75147 1896 aa11.12□□□□□ -0.63
PROM1-207ENST00000508167 ATG2BQ96BY7 2078 aa11.12□□□□□ -0.63
PROM1-207ENST00000508167 REV3LO60673 3130 aa11.12□□□□□ -0.63
PROM1-207ENST00000508167 EBAG9O00559 213 aa11.12□□□□□ -0.63
PROM1-207ENST00000508167 SLC4A1P02730 911 aa11.12□□□□□ -0.63
PROM1-207ENST00000508167 ACTN3Q08043 901 aaPredicted RBP11.12□□□□□ -0.63
PROM1-207ENST00000508167 WASHC5Q12768 1159 aa11.12□□□□□ -0.63
PROM1-207ENST00000508167 ITIH4Q14624 930 aa11.12□□□□□ -0.63
PROM1-207ENST00000508167 EIF4HQ15056 248 aaKnown RBP11.12□□□□□ -0.63
PROM1-207ENST00000508167 TEX44Q53QW1 395 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms