RNA–Protein interactions for RNA: ENST00000507845.5

UBE2D3-221, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-221ENST00000507845 FAM46CQ5VWP2 391 aa13.61□□□□□ -0.23
UBE2D3-221ENST00000507845 GDPD4Q6W3E5 623 aa13.61□□□□□ -0.23
UBE2D3-221ENST00000507845 CAMK1DQ8IU85 385 aa13.61□□□□□ -0.23
UBE2D3-221ENST00000507845 PGBD3Q8N328 593 aa13.61□□□□□ -0.23
UBE2D3-221ENST00000507845 AADATQ8N5Z0 425 aa13.61□□□□□ -0.23
UBE2D3-221ENST00000507845 ARRDC3Q96B67 414 aa13.61□□□□□ -0.23
UBE2D3-221ENST00000507845 KRTAP3-3Q9BYR6 98 aa13.61□□□□□ -0.23
UBE2D3-221ENST00000507845 KRTAP3-2Q9BYR7 98 aa13.61□□□□□ -0.23
UBE2D3-221ENST00000507845 TPSD1Q9BZJ3 242 aa13.61□□□□□ -0.23
UBE2D3-221ENST00000507845 GBA3Q9H227 469 aa13.61□□□□□ -0.23
UBE2D3-221ENST00000507845 ATP13A3Q9H7F0 1226 aa13.61□□□□□ -0.23
UBE2D3-221ENST00000507845 CCDC163A0A0D9SF12 145 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 AXIN1O15169 862 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 DNTTP04053 509 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 SERPINF2P08697 491 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 ETS1P14921 441 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 ITGB7P26010 798 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 SERPINA4P29622 427 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 DRD3P35462 400 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 CD86P42081 329 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 FNTAP49354 379 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 FNTBP49356 437 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 BCL2L1Q07817 233 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 TRAF2Q12933 501 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 ANGPT1Q15389 498 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 P3H1Q32P28 736 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 LRRK1Q38SD2 2015 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 ZNF805Q5CZA5 627 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 ITPRIPL1Q6GPH6 555 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 CCDC137Q6PK04 289 aaKnown RBP13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 PRUNE1Q86TP1 453 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 PRPF39Q86UA1 669 aaKnown RBP13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 GLIS1Q8NBF1 620 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 ATL2Q8NHH9 583 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 SPATA22Q8NHS9 363 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 NELL1Q92832 810 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 TADA1Q96BN2 335 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 ZNF641Q96N77 438 aaPredicted RBP13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 KLHL32Q96NJ5 620 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 FCRL5Q96RD9 977 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 RBM15Q96T37 977 aaKnown RBP eCLIP13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 GORASP1Q9BQQ3 440 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 DDX47Q9H0S4 455 aaKnown RBP13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 SUV39H2Q9H5I1 410 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 CD93Q9NPY3 652 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 ITM2CQ9NQX7 267 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 USP36Q9P275 1121 aaKnown RBP13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 SERGEFQ9UGK8 458 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 RSPH14Q9UHP6 348 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 SCML1Q9UN30 329 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 PCDHGC4Q9Y5F7 938 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 MRFAP1Q9Y605 127 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 DOCK9Q9BZ29 2069 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 ABCA7Q8IZY2 2146 aa13.6□□□□□ -0.23
UBE2D3-221ENST00000507845 A0A1W2PP55 124 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 TSPAN11A1L157 253 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 F5H423 210 aaPredicted RBP13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 CCDC188H7C350 402 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 PLK4O00444 970 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 TRAFD1O14545 582 aaPredicted RBP13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 HTRA2O43464 458 aaPredicted RBP13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 SOCS5O75159 536 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 IFNB1P01574 187 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 IGLV3-19P01714 112 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 ACADMP11310 421 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 PSMB4P28070 264 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 TPMTP51580 245 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 LMNB2Q03252 620 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 CNTN1Q12860 1018 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 TUBB2AQ13885 445 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 SLC14A2Q15849 920 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 WHAMMP3Q1A5X7 153 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 ZNF528Q3MIS6 628 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 TTC31Q49AM3 519 aaPredicted RBP13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 ARHGEF18Q6ZSZ5 1173 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 USP30Q70CQ3 517 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 PARS2Q7L3T8 475 aaKnown RBP13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 GSTA5Q7RTV2 222 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 ZNF572Q7Z3I7 529 aaPredicted RBP13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 WDR5BQ86VZ2 330 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 ZSWIM9Q86XI8 627 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 HDDC3Q8N4P3 179 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 CCDC89Q8N998 374 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 FAM131CQ96AQ9 280 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 ECHDC3Q96DC8 303 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 OXNAD1Q96HP4 312 aaPredicted RBP13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 PPP1R16AQ96I34 528 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 TUBB2BQ9BVA1 445 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 HDAC8Q9BY41 377 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 FBXL12Q9NXK8 326 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 DKK3Q9UBP4 350 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 RAI2Q9Y5P3 530 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 THADAQ6YHU6 1953 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 CACNA1HO95180 2353 aa13.59□□□□□ -0.23
UBE2D3-221ENST00000507845 TRPM6Q9BX84 2022 aa13.58□□□□□ -0.24
UBE2D3-221ENST00000507845 C16orf96A6NNT2 1141 aa13.58□□□□□ -0.24
UBE2D3-221ENST00000507845 RNASEH2AO75792 299 aaKnown RBP13.58□□□□□ -0.24
UBE2D3-221ENST00000507845 METTL18O95568 372 aa13.58□□□□□ -0.24
UBE2D3-221ENST00000507845 MT-CYBP00156 380 aaPredicted RBP13.58□□□□□ -0.24
UBE2D3-221ENST00000507845 ZSCAN5DPP0CG00 497 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms