RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 ZC3HC1Q86WB0 502 aaKnown RBP17.26■□□□□ 0.35
SQSTM1-211ENST00000506690 PSTKQ8IV42 348 aaKnown RBP17.26■□□□□ 0.35
SQSTM1-211ENST00000506690 AQP12AQ8IXF9 295 aa17.26■□□□□ 0.35
SQSTM1-211ENST00000506690 SLC35F5Q8WV83 523 aa17.26■□□□□ 0.35
SQSTM1-211ENST00000506690 CYGBQ8WWM9 190 aa17.26■□□□□ 0.35
SQSTM1-211ENST00000506690 HPDLQ96IR7 371 aa17.26■□□□□ 0.35
SQSTM1-211ENST00000506690 GPR78Q96P69 363 aa17.26■□□□□ 0.35
SQSTM1-211ENST00000506690 NT5C1AQ9BXI3 368 aa17.26■□□□□ 0.35
SQSTM1-211ENST00000506690 YTHDF1Q9BYJ9 559 aaKnown RBP17.26■□□□□ 0.35
SQSTM1-211ENST00000506690 NANOGQ9H9S0 305 aa17.26■□□□□ 0.35
SQSTM1-211ENST00000506690 PSME4Q14997 1843 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 KRBA1A5PL33 1030 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 FAM149AA5PLN7 773 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 GOLGA8TH3BQL2 631 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 ACKR2O00590 384 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 UBDO15205 165 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 ACOX3O15254 700 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 B4GALT5O43286 388 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 ARSAP15289 507 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 LRPAP1P30533 357 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 HLCSP50747 726 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 CCT8P50990 548 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 USP10Q14694 798 aaKnown RBP17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 OXA1LQ15070 435 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 NEDD8Q15843 81 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 CNSTQ6PJW8 725 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 LAYNQ6UX15 382 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 PIWIL4Q7Z3Z4 852 aaKnown RBP17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 ERO1BQ86YB8 467 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 ZDHHC17Q8IUH5 632 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 PNPT1Q8TCS8 783 aaKnown RBP17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 CASP10Q92851 521 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 SNX27Q96L92 541 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 CDT1Q9H211 546 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 RHOJQ9H4E5 214 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 MEAF6Q9HAF1 191 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 C8orf4Q9NR00 106 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 RCOR3Q9P2K3 495 aaPredicted RBP17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 SEPT3Q9UH03 358 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 RNF103-CHMP3A0A140T963 221 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 DHRS12A0PJE2 317 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 CLPXO76031 633 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 ZBTB7AO95365 584 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 BCL10O95999 233 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 JAK1P23458 1154 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 ICAM3P32942 547 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 MXD4Q14582 209 aaPredicted RBP17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 PID1Q7Z2X4 250 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 FAM83AQ86UY5 434 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 ZBTB46Q86UZ6 589 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 OFCC1Q8IZS5 231 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 TAMM41Q96BW9 452 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 CENPNQ96H22 339 aaPredicted RBP17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 GMLQ99445 158 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 SLC39A3Q9BRY0 314 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 EIF2AQ9BY44 585 aaKnown RBP17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 OSBPL2Q9H1P3 480 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 C2orf40Q9H1Z8 148 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 PRDM12Q9H4Q4 367 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 AURKCQ9UQB9 309 aa17.25■□□□□ 0.35
SQSTM1-211ENST00000506690 KPNA4O00629 521 aaPredicted RBP17.24■□□□□ 0.35
SQSTM1-211ENST00000506690 AQP9O43315 295 aa17.24■□□□□ 0.35
SQSTM1-211ENST00000506690 SAT1P21673 171 aa17.24■□□□□ 0.35
SQSTM1-211ENST00000506690 FASP25445 335 aa17.24■□□□□ 0.35
SQSTM1-211ENST00000506690 CAPGP40121 348 aa17.24■□□□□ 0.35
SQSTM1-211ENST00000506690 MLLT10P55197 1068 aa17.24■□□□□ 0.35
SQSTM1-211ENST00000506690 TRIM16LQ309B1 348 aa17.24■□□□□ 0.35
SQSTM1-211ENST00000506690 PITRM1Q5JRX3 1037 aa17.24■□□□□ 0.35
SQSTM1-211ENST00000506690 SLC26A9Q7LBE3 791 aa17.24■□□□□ 0.35
SQSTM1-211ENST00000506690 NIM1KQ8IY84 436 aa17.24■□□□□ 0.35
SQSTM1-211ENST00000506690 CCNYQ8ND76 341 aa17.24■□□□□ 0.35
SQSTM1-211ENST00000506690 REPS2Q8NFH8 660 aa17.24■□□□□ 0.35
SQSTM1-211ENST00000506690 SEZ6LQ9BYH1 1024 aa17.24■□□□□ 0.35
SQSTM1-211ENST00000506690 FZD8Q9H461 694 aa17.24■□□□□ 0.35
SQSTM1-211ENST00000506690 GTSE1Q9NYZ3 720 aa17.24■□□□□ 0.35
SQSTM1-211ENST00000506690 OAZ3Q9UMX2 235 aa17.24■□□□□ 0.35
SQSTM1-211ENST00000506690 ZNF638Q14966 1978 aaKnown RBP17.24■□□□□ 0.35
SQSTM1-211ENST00000506690 C1orf232A0A0U1RR37 186 aa17.23■□□□□ 0.35
SQSTM1-211ENST00000506690 MAGEB16A2A368 324 aa17.23■□□□□ 0.35
SQSTM1-211ENST00000506690 SEC14L2O76054 403 aa17.23■□□□□ 0.35
SQSTM1-211ENST00000506690 JUNBP17275 347 aaPredicted RBP17.23■□□□□ 0.35
SQSTM1-211ENST00000506690 POLR2IP36954 125 aaKnown RBP17.23■□□□□ 0.35
SQSTM1-211ENST00000506690 AVPR1AP37288 418 aa17.23■□□□□ 0.35
SQSTM1-211ENST00000506690 C1QTNF8P60827 252 aa17.23■□□□□ 0.35
SQSTM1-211ENST00000506690 PPP1R3AQ16821 1122 aa17.23■□□□□ 0.35
SQSTM1-211ENST00000506690 CYBRD1Q53TN4 286 aa17.23■□□□□ 0.35
SQSTM1-211ENST00000506690 CERCAMQ5T4B2 595 aa17.23■□□□□ 0.35
SQSTM1-211ENST00000506690 USP51Q70EK9 711 aa17.23■□□□□ 0.35
SQSTM1-211ENST00000506690 CMTR2Q8IYT2 770 aaKnown RBP17.23■□□□□ 0.35
SQSTM1-211ENST00000506690 DNAAF3Q8N9W5 541 aa17.23■□□□□ 0.35
SQSTM1-211ENST00000506690 GOLM1Q8NBJ4 401 aa17.23■□□□□ 0.35
SQSTM1-211ENST00000506690 ROPN1LQ96C74 230 aa17.23■□□□□ 0.35
SQSTM1-211ENST00000506690 FAR2Q96K12 515 aa17.23■□□□□ 0.35
SQSTM1-211ENST00000506690 MROQ9BYG7 248 aa17.23■□□□□ 0.35
SQSTM1-211ENST00000506690 UNKQ9C0B0 810 aaKnown RBP17.23■□□□□ 0.35
SQSTM1-211ENST00000506690 FAM124BQ9H5Z6 455 aaPredicted RBP17.23■□□□□ 0.35
SQSTM1-211ENST00000506690 GPN2Q9H9Y4 310 aaPredicted RBP17.23■□□□□ 0.35
SQSTM1-211ENST00000506690 ZFYVE28Q9HCC9 887 aa17.23■□□□□ 0.35
SQSTM1-211ENST00000506690 CHRAC1Q9NRG0 131 aa17.23■□□□□ 0.35
SQSTM1-211ENST00000506690 GIT1Q9Y2X7 761 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms