RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 TMEM143Q96AN5 459 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 ALPK1Q96QP1 1244 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 GPR22Q99680 433 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 TUT1Q9H6E5 874 aaKnown RBP16.04■□□□□ 0.16
SCLT1-208ENST00000506368 ARMC7Q9H6L4 198 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 GMIPQ9P107 970 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 MAFBQ9Y5Q3 323 aaPredicted RBP16.04■□□□□ 0.16
SCLT1-208ENST00000506368 C1orf232A0A0U1RR37 186 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 HSD17B1P14061 328 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 ZNF182P17025 639 aaPredicted RBP16.04■□□□□ 0.16
SCLT1-208ENST00000506368 GSSP48637 474 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 CCT8P50990 548 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 NAGLUP54802 743 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 PSTKQ8IV42 348 aaKnown RBP16.04■□□□□ 0.16
SCLT1-208ENST00000506368 TMEM151AQ8N4L1 468 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 CCDC126Q96EE4 140 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 C1QTNF1Q9BXJ1 281 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 SEZ6LQ9BYH1 1024 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 DHX35Q9H5Z1 703 aaKnown RBP16.04■□□□□ 0.16
SCLT1-208ENST00000506368 NANOGQ9H9S0 305 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 EML4Q9HC35 981 aaKnown RBP16.04■□□□□ 0.16
SCLT1-208ENST00000506368 RAVER2Q9HCJ3 691 aaKnown RBP16.04■□□□□ 0.16
SCLT1-208ENST00000506368 TBC1D13Q9NVG8 400 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 DTLQ9NZJ0 730 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 TARM1B6A8C7 271 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 AREL1O15033 823 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 UBDO15205 165 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 NR3C2P08235 984 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 UMPSP11172 480 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 SCNN1AP37088 669 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 SLC6A3Q01959 620 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 GALNT1Q10472 559 aaPredicted RBP16.03■□□□□ 0.16
SCLT1-208ENST00000506368 CBX2Q14781 532 aaPredicted RBP16.03■□□□□ 0.16
SCLT1-208ENST00000506368 PHKG1Q16816 387 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 UGP2Q16851 508 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 ZNF362Q5T0B9 420 aaPredicted RBP16.03■□□□□ 0.16
SCLT1-208ENST00000506368 ZNF618Q5T7W0 954 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 TFAP2DQ7Z6R9 452 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 TRIM50Q86XT4 487 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 ZC3H7AQ8IWR0 971 aaKnown RBP16.03■□□□□ 0.16
SCLT1-208ENST00000506368 HOMEZQ8IX15 550 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 ZNF669Q96BR6 464 aaPredicted RBP16.03■□□□□ 0.16
SCLT1-208ENST00000506368 VMP1Q96GC9 406 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 VPS39Q96JC1 886 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 APBA2Q99767 749 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 RMND5AQ9H871 391 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 MEAF6Q9HAF1 191 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 MOV10Q9HCE1 1003 aaKnown RBP16.03■□□□□ 0.16
SCLT1-208ENST00000506368 GPATCH2LQ9NWQ4 482 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 ABCD2Q9UBJ2 740 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 ERVK-11Q9UQG0 969 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 CORINQ9Y5Q5 1042 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 SNX9Q9Y5X1 595 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 FAM47E-STBD1D6RA91 191 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 FOXD2O60548 495 aaPredicted RBP16.03■□□□□ 0.16
SCLT1-208ENST00000506368 MSCO60682 206 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 ASNSP08243 561 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 GNAO1P09471 354 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 GRIA3P42263 894 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 CRADDP78560 199 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 IRF9Q00978 393 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 IFRD2Q12894 506 aaPredicted RBP16.03■□□□□ 0.16
SCLT1-208ENST00000506368 VGLL4Q14135 290 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 CA9Q16790 459 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 DCAF15Q66K64 600 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 NCBP2-AS2Q69YL0 99 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 TMCO5AQ8N6Q1 288 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 ADAM32Q8TC27 787 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 CSPG4P5Q96PW8 444 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 ELOVL4Q9GZR5 314 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 GBA3Q9H227 469 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 INTS10Q9NVR2 710 aaKnown RBP16.03■□□□□ 0.16
SCLT1-208ENST00000506368 ACTR3BQ9P1U1 418 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 ANKMY1Q9P2S6 941 aa16.03■□□□□ 0.16
SCLT1-208ENST00000506368 SAC3D1A6NKF1 404 aa16.02■□□□□ 0.15
SCLT1-208ENST00000506368 C16orf96A6NNT2 1141 aa16.02■□□□□ 0.15
SCLT1-208ENST00000506368 J3QRK9 145 aa16.02■□□□□ 0.15
SCLT1-208ENST00000506368 UGT2B4P06133 528 aa16.02■□□□□ 0.15
SCLT1-208ENST00000506368 TFE3P19532 575 aaPredicted RBP16.02■□□□□ 0.15
SCLT1-208ENST00000506368 ARL4AP40617 200 aa16.02■□□□□ 0.15
SCLT1-208ENST00000506368 NPY2RP49146 381 aa16.02■□□□□ 0.15
SCLT1-208ENST00000506368 FOXM1Q08050 763 aa16.02■□□□□ 0.15
SCLT1-208ENST00000506368 CAPSQ13938 189 aa16.02■□□□□ 0.15
SCLT1-208ENST00000506368 NANOGNBQ7Z5D8 188 aa16.02■□□□□ 0.15
SCLT1-208ENST00000506368 EPHX4Q8IUS5 362 aa16.02■□□□□ 0.15
SCLT1-208ENST00000506368 SPPL2BQ8TCT7 592 aa16.02■□□□□ 0.15
SCLT1-208ENST00000506368 FBXL8Q96CD0 374 aa16.02■□□□□ 0.15
SCLT1-208ENST00000506368 MYRFLQ96LU7 910 aa16.02■□□□□ 0.15
SCLT1-208ENST00000506368 BEGAINQ9BUH8 593 aa16.02■□□□□ 0.15
SCLT1-208ENST00000506368 C2orf40Q9H1Z8 148 aa16.02■□□□□ 0.15
SCLT1-208ENST00000506368 RHOJQ9H4E5 214 aa16.02■□□□□ 0.15
SCLT1-208ENST00000506368 ZFYVE28Q9HCC9 887 aa16.02■□□□□ 0.15
SCLT1-208ENST00000506368 ZNF302Q9NR11 478 aa16.02■□□□□ 0.15
SCLT1-208ENST00000506368 PTPRFP10586 1907 aa16.02■□□□□ 0.15
SCLT1-208ENST00000506368 ZCWPW2A0A1B0GU75 182 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 TK2O00142 265 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 RNF103O00237 685 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 ABCB7O75027 752 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 GPC4O75487 556 aa16.01■□□□□ 0.15
SCLT1-208ENST00000506368 MAP3K6O95382 1288 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms