RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 ATXN1LP0C7T5 689 aaKnown RBP17.43■□□□□ 0.38
TRAPPC11-204ENST00000505676 RPL17P18621 184 aaKnown RBP17.43■□□□□ 0.38
TRAPPC11-204ENST00000505676 KCNA4P22459 653 aa17.43■□□□□ 0.38
TRAPPC11-204ENST00000505676 TARSP26639 723 aaKnown RBP17.43■□□□□ 0.38
TRAPPC11-204ENST00000505676 ACVRL1P37023 503 aa17.43■□□□□ 0.38
TRAPPC11-204ENST00000505676 SIRPB2Q5JXA9 342 aa17.43■□□□□ 0.38
TRAPPC11-204ENST00000505676 KIRREL3Q8IZU9 778 aa17.43■□□□□ 0.38
TRAPPC11-204ENST00000505676 PGBD5Q8N414 524 aa17.43■□□□□ 0.38
TRAPPC11-204ENST00000505676 SLC25A41Q8N5S1 370 aa17.43■□□□□ 0.38
TRAPPC11-204ENST00000505676 ATXN7L3BQ96GX2 97 aa17.43■□□□□ 0.38
TRAPPC11-204ENST00000505676 C1QTNF1Q9BXJ1 281 aa17.43■□□□□ 0.38
TRAPPC11-204ENST00000505676 ACE2Q9BYF1 805 aaPredicted RBP17.43■□□□□ 0.38
TRAPPC11-204ENST00000505676 MRPL17Q9NRX2 175 aaKnown RBP17.43■□□□□ 0.38
TRAPPC11-204ENST00000505676 ATP11BQ9Y2G3 1177 aa17.43■□□□□ 0.38
TRAPPC11-204ENST00000505676 G3V2L1 256 aa17.42■□□□□ 0.38
TRAPPC11-204ENST00000505676 FCHO1O14526 889 aa17.42■□□□□ 0.38
TRAPPC11-204ENST00000505676 PRRG1O14668 218 aa17.42■□□□□ 0.38
TRAPPC11-204ENST00000505676 TOP3BO95985 862 aaKnown RBP17.42■□□□□ 0.38
TRAPPC11-204ENST00000505676 T-ENOLP0DO92 83 aa17.42■□□□□ 0.38
TRAPPC11-204ENST00000505676 PFKLP17858 780 aa17.42■□□□□ 0.38
TRAPPC11-204ENST00000505676 CHRNA4P43681 627 aa17.42■□□□□ 0.38
TRAPPC11-204ENST00000505676 AQP5P55064 265 aa17.42■□□□□ 0.38
TRAPPC11-204ENST00000505676 MAXP61244 160 aa17.42■□□□□ 0.38
TRAPPC11-204ENST00000505676 KCNJ2P63252 427 aa17.42■□□□□ 0.38
TRAPPC11-204ENST00000505676 IRX4P78413 519 aa17.42■□□□□ 0.38
TRAPPC11-204ENST00000505676 LIPMQ5VYY2 423 aa17.42■□□□□ 0.38
TRAPPC11-204ENST00000505676 IL31Q6EBC2 164 aa17.42■□□□□ 0.38
TRAPPC11-204ENST00000505676 DENND1CQ8IV53 801 aa17.42■□□□□ 0.38
TRAPPC11-204ENST00000505676 GPR150Q8NGU9 434 aa17.42■□□□□ 0.38
TRAPPC11-204ENST00000505676 BRSK1Q8TDC3 778 aa17.42■□□□□ 0.38
TRAPPC11-204ENST00000505676 CCDC126Q96EE4 140 aa17.42■□□□□ 0.38
TRAPPC11-204ENST00000505676 TASP1Q9H6P5 420 aa17.42■□□□□ 0.38
TRAPPC11-204ENST00000505676 OXSMQ9NWU1 459 aa17.42■□□□□ 0.38
TRAPPC11-204ENST00000505676 DNAJC16Q9Y2G8 782 aa17.42■□□□□ 0.38
TRAPPC11-204ENST00000505676 CHD5Q8TDI0 1954 aa17.42■□□□□ 0.38
TRAPPC11-204ENST00000505676 SLCO1B7G3V0H7 640 aa17.41■□□□□ 0.38
TRAPPC11-204ENST00000505676 CHUKO15111 745 aa17.41■□□□□ 0.38
TRAPPC11-204ENST00000505676 KLHL2O95198 593 aa17.41■□□□□ 0.38
TRAPPC11-204ENST00000505676 GJB5O95377 273 aa17.41■□□□□ 0.38
TRAPPC11-204ENST00000505676 TIMP1P01033 207 aa17.41■□□□□ 0.38
TRAPPC11-204ENST00000505676 SLC35E2BP0CK96 405 aa17.41■□□□□ 0.38
TRAPPC11-204ENST00000505676 GABRB3P28472 473 aa17.41■□□□□ 0.38
TRAPPC11-204ENST00000505676 PRAMEP78395 509 aa17.41■□□□□ 0.38
TRAPPC11-204ENST00000505676 CIR1Q86X95 450 aaPredicted RBP17.41■□□□□ 0.38
TRAPPC11-204ENST00000505676 ARHGAP24Q8N264 748 aa17.41■□□□□ 0.38
TRAPPC11-204ENST00000505676 PLD6Q8N2A8 252 aaKnown RBP17.41■□□□□ 0.38
TRAPPC11-204ENST00000505676 STYXQ8WUJ0 223 aa17.41■□□□□ 0.38
TRAPPC11-204ENST00000505676 SLC7A6OSQ96CW6 309 aaPredicted RBP17.41■□□□□ 0.38
TRAPPC11-204ENST00000505676 CAB39LQ9H9S4 337 aa17.41■□□□□ 0.38
TRAPPC11-204ENST00000505676 HAO1Q9UJM8 370 aa17.41■□□□□ 0.38
TRAPPC11-204ENST00000505676 ITGA9Q13797 1035 aa17.41■□□□□ 0.38
TRAPPC11-204ENST00000505676 TTC8Q8TAM2 541 aa17.41■□□□□ 0.38
TRAPPC11-204ENST00000505676 PDCD6IPQ8WUM4 868 aaKnown RBP17.41■□□□□ 0.38
TRAPPC11-204ENST00000505676 PTCD3Q96EY7 689 aaKnown RBP17.41■□□□□ 0.38
TRAPPC11-204ENST00000505676 ELMO2Q96JJ3 720 aa17.41■□□□□ 0.38
TRAPPC11-204ENST00000505676 MRPL57Q9BQC6 102 aaKnown RBP17.41■□□□□ 0.38
TRAPPC11-204ENST00000505676 ATXN3LQ9H3M9 355 aa17.41■□□□□ 0.38
TRAPPC11-204ENST00000505676 SLC2A6Q9UGQ3 507 aa17.41■□□□□ 0.38
TRAPPC11-204ENST00000505676 ZNF510Q9Y2H8 683 aa17.41■□□□□ 0.38
TRAPPC11-204ENST00000505676 INSL5Q9Y5Q6 135 aa17.41■□□□□ 0.38
TRAPPC11-204ENST00000505676 HGSO14964 777 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 ATP6V1G2O95670 118 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 CRTAMO95727 393 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 OGNP20774 298 aaKnown RBP17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 MPP1Q00013 466 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 CTBP1Q13363 440 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 CES4AQ5XG92 561 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 MRNIPQ6NTE8 343 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 KLC3Q6P597 504 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 ZCCHC23Q6ZST2 131 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 CILP2Q8IUL8 1156 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 DENND6AQ8IWF6 608 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 HJURPQ8NCD3 748 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 OR13J1Q8NGT2 312 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 PRICKLE1Q96MT3 831 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 MRPL46Q9H2W6 279 aaKnown RBP17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 MMADHCQ9H3L0 296 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 AGO1Q9UL18 857 aaKnown RBP17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 MIA3Q5JRA6 1907 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 GOLGA8TH3BQL2 631 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 KIAA0355O15063 1070 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 HSPA4LO95757 839 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 OLFM2O95897 454 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 MYCP01106 439 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 KRT16P08779 473 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 ESRRAP11474 423 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 PSMA3P25788 255 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 MNAT1P51948 309 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 TWF1Q12792 350 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 FAM83EQ2M2I3 478 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 AGAP9Q5VTM2 703 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 LRRC8EQ6NSJ5 796 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 RFWD3Q6PCD5 774 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 DNAJB7Q7Z6W7 309 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 SLC41A1Q8IVJ1 513 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 TMEM199Q8N511 208 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 CFAP61Q8NHU2 1237 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 VWCEQ96DN2 955 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms