RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 HSD11B2P80365 405 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 TXNL4AP83876 142 aaKnown RBP3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 SRSF3P84103 164 aaKnown RBP3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 TFAP4Q01664 338 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 PPATQ06203 517 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 GRSF1Q12849 480 aaKnown RBP eCLIP3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 FAM187BQ17R55 369 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 SPOUT1Q5T280 376 aaKnown RBP3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 GJB7Q6PEY0 223 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 TMEM88Q6PEY1 159 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 SLC23A3Q6PIS1 610 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 MOXD1Q6UVY6 613 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 Q6ZUG5 572 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 PLEKHM3Q6ZWE6 761 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 PARS2Q7L3T8 475 aaKnown RBP3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 LPCAT2Q7L5N7 544 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 SPRED2Q7Z698 418 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 CLNKQ7Z7G1 428 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 B3GNT8Q7Z7M8 397 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 TMEM110Q86TL2 294 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 CNTN4Q8IWV2 1026 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 RNF168Q8IYW5 571 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 CLYBLQ8N0X4 340 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 SFRP1Q8N474 314 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 LPCAT1Q8NF37 534 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 OR52L2PQ8NGH6 319 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 URGCPQ8TCY9 931 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 C2CD4CQ8TF44 421 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 GDPD5Q8WTR4 605 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 ATG4AQ8WYN0 398 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 SHC3Q92529 594 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 SNX19Q92543 992 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 TEKT1Q969V4 418 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 R3HDM4Q96D70 268 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 ARHGEF26Q96DR7 871 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 FBXL20Q96IG2 436 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 NEK1Q96PY6 1258 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 FYTTD1Q96QD9 318 aaKnown RBP3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 PARK7Q99497 189 aaKnown RBP3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 HNRNPABQ99729 332 aaKnown RBP3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 TCHPQ9BT92 498 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 MLPHQ9BV36 600 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 ELOVL1Q9BW60 279 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 CINPQ9BW66 212 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 SSBP4Q9BWG4 385 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 CADM1Q9BY67 442 aaKnown RBP3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 IRX2Q9BZI1 471 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 TMEM168Q9H0V1 697 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 VPS33BQ9H267 617 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 TASP1Q9H6P5 420 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 MRPL44Q9H9J2 332 aaKnown RBP3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 SAP30LQ9HAJ7 183 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 GLOD4Q9HC38 313 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 PAK6Q9NQU5 681 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 ASAH2Q9NR71 780 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 IARS2Q9NSE4 1012 aaKnown RBP3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 PLK2Q9NYY3 685 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 NCKIPSDQ9NZQ3 722 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 FAM30AQ9NZY2 134 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 DDX25Q9UHL0 483 aaKnown RBP3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 FBXW2Q9UKT8 454 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 ITGA11Q9UKX5 1188 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 CDH7Q9ULB5 785 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 SSX2IPQ9Y2D8 614 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 PCDHGA5Q9Y5G8 931 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 PCDHGA1Q9Y5H4 931 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 CYP3A7-CYP3A51PA0A087WV96 503 aa3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 LOC102723996A0A087X1L8 192 aa3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 CTAGE9A4FU28 777 aa3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 TCAF2A6NFQ2 919 aa3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 AKR1B15C9JRZ8 316 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 H0YC42 278 aa3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 IFNL4K9M1U5 179 aa3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 UBXN8O00124 270 aa3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 IKBKBO14920 756 aa3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 PAPSS1O43252 624 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 ZC3H11AO75152 810 aaKnown RBP eCLIP3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 DDHD2O94830 711 aa3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 SUN1O94901 812 aa3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 KAT7O95251 611 aa3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 TRIM16O95361 564 aa3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 GPANK1O95872 356 aa3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 ALDOCP09972 364 aaKnown RBP3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 TSPY4P0CV99 314 aa3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 TSPY10P0CW01 314 aa3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 UROSP10746 265 aa3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 TOP1P11387 765 aaKnown RBP3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 NCF1P14598 390 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 KRT4P19013 534 aa3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 CYP3A7P24462 503 aa3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 ADRA1DP25100 572 aa3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 PCGF2P35227 344 aa3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 HNMTP50135 292 aa3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 ANXA11P50995 505 aaKnown RBP3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 CLCN3P51790 818 aa3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 EFNA5P52803 228 aa3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 PDE1AP54750 535 aa3.72□□□□□ -1.81
HMGB1P22-201ENST00000505315 STARD6P59095 220 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms