RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 KRIT1O00522 736 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 DDX3XO00571 662 aaKnown RBP eCLIP13.33□□□□□ -0.28
DDX41-204ENST00000504807 TERTO14746 1132 aaKnown RBP13.33□□□□□ -0.28
DDX41-204ENST00000504807 SIGLEC6O43699 453 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 CREB3O43889 395 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 MBD3O95983 291 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 UGT2B4P06133 528 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 TCF4P15884 667 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 FERP16591 822 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 HNRNPA2B1P22626 353 aaKnown RBP13.33□□□□□ -0.28
DDX41-204ENST00000504807 DGKAP23743 735 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 EPHB2P29323 1055 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 RGRP47804 291 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 PCBP4P57723 403 aaKnown RBP13.33□□□□□ -0.28
DDX41-204ENST00000504807 NFKB2Q00653 900 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 SLC20A2Q08357 652 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 FZD2Q14332 565 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 POLD3Q15054 466 aaPredicted RBP13.33□□□□□ -0.28
DDX41-204ENST00000504807 CYTH1Q15438 398 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 MYLK3Q32MK0 819 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 ARL13BQ3SXY8 428 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 CAVIN1Q6NZI2 390 aaKnown RBP13.33□□□□□ -0.28
DDX41-204ENST00000504807 NEK5Q6P3R8 708 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 FBXL19Q6PCT2 694 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 ZSWIM9Q86XI8 627 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 OR2AP1Q8NGE2 309 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 FUBP1Q96AE4 644 aaKnown RBP13.33□□□□□ -0.28
DDX41-204ENST00000504807 ISG20Q96AZ6 181 aaKnown RBP13.33□□□□□ -0.28
DDX41-204ENST00000504807 EXOC2Q96KP1 924 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 CCDC114Q96M63 670 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 KLHL32Q96NJ5 620 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 BPIFA3Q9BQP9 254 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 CALN1Q9BXU9 219 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 HAUS4Q9H6D7 363 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 LRRC19Q9H756 370 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 MFHAS1Q9Y4C4 1052 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 FARP1Q9Y4F1 1045 aaPredicted RBP13.33□□□□□ -0.28
DDX41-204ENST00000504807 ARID1BQ8NFD5 2236 aaPredicted RBP13.33□□□□□ -0.28
DDX41-204ENST00000504807 CREBBPQ92793 2442 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 COL27A1Q8IZC6 1860 aaPredicted RBP13.32□□□□□ -0.28
DDX41-204ENST00000504807 A0A1B0GTH6 734 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 WASH4PA8MWX3 477 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 RASA4BC9J798 803 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 AREL1O15033 823 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 KLK10O43240 276 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 RASA4O43374 803 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 NEBLO76041 1014 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 PIGNO95427 931 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 GSRP00390 522 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 SKILP12757 684 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 RECQLP46063 649 aaPredicted RBP13.32□□□□□ -0.28
DDX41-204ENST00000504807 ARRB1P49407 418 aaPredicted RBP13.32□□□□□ -0.28
DDX41-204ENST00000504807 VAC14Q08AM6 782 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 SERINC3Q13530 473 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 C4orf17Q53FE4 359 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 SLC45A4Q5BKX6 768 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 KCTD16Q68DU8 428 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 PLEKHA7Q6IQ23 1121 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 ARHGAP36Q6ZRI8 547 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 Q6ZSR6 202 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 TMC6Q7Z403 805 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 PLPP6Q8IY26 295 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 RYBPQ8N488 228 aaPredicted RBP13.32□□□□□ -0.28
DDX41-204ENST00000504807 NPWQ8N729 165 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 SKA1Q96BD8 255 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 CELF6Q96J87 481 aaKnown RBP13.32□□□□□ -0.28
DDX41-204ENST00000504807 KCTD15Q96SI1 283 aaPredicted RBP13.32□□□□□ -0.28
DDX41-204ENST00000504807 CNPY3Q9BT09 278 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 SNRNP25Q9BV90 132 aaKnown RBP13.32□□□□□ -0.28
DDX41-204ENST00000504807 C1QTNF2Q9BXJ5 285 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 SLC17A9Q9BYT1 436 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 TCEAL2Q9H3H9 227 aaPredicted RBP13.32□□□□□ -0.28
DDX41-204ENST00000504807 DYRK4Q9NR20 520 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 KLHL11Q9NVR0 708 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 TMEM51Q9NW97 253 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 TPX2Q9ULW0 747 aaKnown RBP13.32□□□□□ -0.28
DDX41-204ENST00000504807 AHCTF1Q8WYP5 2266 aa13.32□□□□□ -0.28
DDX41-204ENST00000504807 TMEM191CA6NGB0 347 aa13.31□□□□□ -0.28
DDX41-204ENST00000504807 FFAR2O15552 330 aa13.31□□□□□ -0.28
DDX41-204ENST00000504807 BUB1O43683 1085 aa13.31□□□□□ -0.28
DDX41-204ENST00000504807 AP1G1O43747 822 aa13.31□□□□□ -0.28
DDX41-204ENST00000504807 BUB1BO60566 1050 aaPredicted RBP13.31□□□□□ -0.28
DDX41-204ENST00000504807 PIAS2O75928 621 aa13.31□□□□□ -0.28
DDX41-204ENST00000504807 C1SP09871 688 aa13.31□□□□□ -0.28
DDX41-204ENST00000504807 CDK4P11802 303 aa13.31□□□□□ -0.28
DDX41-204ENST00000504807 AKT2P31751 481 aa13.31□□□□□ -0.28
DDX41-204ENST00000504807 IGFALSP35858 605 aa13.31□□□□□ -0.28
DDX41-204ENST00000504807 NUDT1P36639 197 aa13.31□□□□□ -0.28
DDX41-204ENST00000504807 OVGP1Q12889 678 aa13.31□□□□□ -0.28
DDX41-204ENST00000504807 EIF2B5Q13144 721 aaKnown RBP13.31□□□□□ -0.28
DDX41-204ENST00000504807 ZNF805Q5CZA5 627 aa13.31□□□□□ -0.28
DDX41-204ENST00000504807 EFHC2Q5JST6 749 aa13.31□□□□□ -0.28
DDX41-204ENST00000504807 KYAT3Q6YP21 454 aaKnown RBP13.31□□□□□ -0.28
DDX41-204ENST00000504807 ARHGAP12Q8IWW6 846 aa13.31□□□□□ -0.28
DDX41-204ENST00000504807 UMODL1-AS1Q8N2C9 162 aa13.31□□□□□ -0.28
DDX41-204ENST00000504807 ANKRD20A12PQ8NF67 263 aa13.31□□□□□ -0.28
DDX41-204ENST00000504807 PPP1R16AQ96I34 528 aa13.31□□□□□ -0.28
DDX41-204ENST00000504807 SLC39A8Q9C0K1 460 aa13.31□□□□□ -0.28
DDX41-204ENST00000504807 MBNL1Q9NR56 388 aaKnown RBP13.31□□□□□ -0.28
DDX41-204ENST00000504807 PCSK1NQ9UHG2 260 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms