RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 GRK6P43250 576 aa14.42□□□□□ -0.1
HOXC9-202ENST00000504557 HCAR3P49019 387 aa14.42□□□□□ -0.1
HOXC9-202ENST00000504557 HNRNPDQ14103 355 aaKnown RBP14.42□□□□□ -0.1
HOXC9-202ENST00000504557 SHBQ15464 509 aa14.42□□□□□ -0.1
HOXC9-202ENST00000504557 TMEM259Q4ZIN3 620 aa14.42□□□□□ -0.1
HOXC9-202ENST00000504557 ZNF542PQ5EBM4 170 aa14.42□□□□□ -0.1
HOXC9-202ENST00000504557 KIAA1161Q6NSJ0 714 aa14.42□□□□□ -0.1
HOXC9-202ENST00000504557 GCNT7Q6ZNI0 430 aa14.42□□□□□ -0.1
HOXC9-202ENST00000504557 CAMK1DQ8IU85 385 aa14.42□□□□□ -0.1
HOXC9-202ENST00000504557 EID2Q8N6I1 236 aa14.42□□□□□ -0.1
HOXC9-202ENST00000504557 KCTD6Q8NC69 237 aa14.42□□□□□ -0.1
HOXC9-202ENST00000504557 CXorf40AQ8TE69 158 aa14.42□□□□□ -0.1
HOXC9-202ENST00000504557 TEKT4Q8WW24 435 aa14.42□□□□□ -0.1
HOXC9-202ENST00000504557 PCDHGB2Q9Y5G2 931 aa14.42□□□□□ -0.1
HOXC9-202ENST00000504557 SSU72P8A0A1W2PR75 194 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 SPINT1O43278 529 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 TSPAN6O43657 245 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 AP1G1O43747 822 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 BUB1BO60566 1050 aaPredicted RBP14.41□□□□□ -0.1
HOXC9-202ENST00000504557 MAGEC1O60732 1142 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 CBFA2T3O75081 653 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 PROSCO94903 275 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 TIMP2P16035 220 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 SCNN1BP51168 640 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 ZNF135P52742 658 aaPredicted RBP14.41□□□□□ -0.1
HOXC9-202ENST00000504557 TAS2R40P59535 323 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 IL10RBQ08334 325 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 SLC10A7Q0GE19 358 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 ZNF235Q14590 738 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 LBRQ14739 615 aaKnown RBP14.41□□□□□ -0.1
HOXC9-202ENST00000504557 ASTE1Q2TB18 679 aaPredicted RBP14.41□□□□□ -0.1
HOXC9-202ENST00000504557 INAVAQ3KP66 663 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 AFMIDQ63HM1 303 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 Q6ZSR6 202 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 SRLQ86TD4 932 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 SLCO6A1Q86UG4 719 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 CNGA4Q8IV77 575 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 ATPAF2Q8N5M1 289 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.41□□□□□ -0.1
HOXC9-202ENST00000504557 TMEM145Q8NBT3 493 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 SLC35G2Q8TBE7 412 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 LRRN4Q8WUT4 740 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 RAB7BQ96AH8 199 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 VOPP1Q96AW1 172 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 UVRAGQ9P2Y5 699 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 FTSJ1Q9UET6 329 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 KLK13Q9UKR3 277 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 APOBEC2Q9Y235 224 aaKnown RBP14.41□□□□□ -0.1
HOXC9-202ENST00000504557 COQ6Q9Y2Z9 468 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 MAP1BP46821 2468 aaKnown RBP14.41□□□□□ -0.1
HOXC9-202ENST00000504557 PLXNB3Q9ULL4 1909 aa14.41□□□□□ -0.1
HOXC9-202ENST00000504557 CHD8Q9HCK8 2581 aa14.4□□□□□ -0.1
HOXC9-202ENST00000504557 POM121BA6NF01 834 aa14.4□□□□□ -0.1
HOXC9-202ENST00000504557 A6NNZ2 444 aa14.4□□□□□ -0.1
HOXC9-202ENST00000504557 A8MX80 341 aa14.4□□□□□ -0.1
HOXC9-202ENST00000504557 MUSKO15146 869 aa14.4□□□□□ -0.1
HOXC9-202ENST00000504557 FFAR2O15552 330 aa14.4□□□□□ -0.1
HOXC9-202ENST00000504557 PCDHGA12O60330 932 aa14.4□□□□□ -0.1
HOXC9-202ENST00000504557 TMEM253P0C7T8 217 aa14.4□□□□□ -0.1
HOXC9-202ENST00000504557 EPHA8P29322 1005 aaPredicted RBP14.4□□□□□ -0.1
HOXC9-202ENST00000504557 TMCO4Q5TGY1 634 aa14.4□□□□□ -0.1
HOXC9-202ENST00000504557 IQCHQ86VS3 1027 aa14.4□□□□□ -0.1
HOXC9-202ENST00000504557 LZTR1Q8N653 840 aa14.4□□□□□ -0.1
HOXC9-202ENST00000504557 PDCD6IPQ8WUM4 868 aaKnown RBP14.4□□□□□ -0.1
HOXC9-202ENST00000504557 CDC6Q99741 560 aa14.4□□□□□ -0.1
HOXC9-202ENST00000504557 RBSNQ9H1K0 784 aa14.4□□□□□ -0.1
HOXC9-202ENST00000504557 SUV39H2Q9H5I1 410 aa14.4□□□□□ -0.1
HOXC9-202ENST00000504557 ATP13A3Q9H7F0 1226 aa14.4□□□□□ -0.1
HOXC9-202ENST00000504557 DNAJC28Q9NX36 388 aa14.4□□□□□ -0.1
HOXC9-202ENST00000504557 ACACBO00763 2458 aa14.4□□□□□ -0.1
HOXC9-202ENST00000504557 MYLKQ15746 1914 aa14.39□□□□□ -0.11
HOXC9-202ENST00000504557 FPGTO14772 594 aa14.39□□□□□ -0.11
HOXC9-202ENST00000504557 MFSD11O43934 449 aa14.39□□□□□ -0.11
HOXC9-202ENST00000504557 SERPINA4P29622 427 aa14.39□□□□□ -0.11
HOXC9-202ENST00000504557 SERPINB6P35237 376 aa14.39□□□□□ -0.11
HOXC9-202ENST00000504557 MAXP61244 160 aa14.39□□□□□ -0.11
HOXC9-202ENST00000504557 BCL2L1Q07817 233 aa14.39□□□□□ -0.11
HOXC9-202ENST00000504557 OVGP1Q12889 678 aa14.39□□□□□ -0.11
HOXC9-202ENST00000504557 DNAJC3Q13217 504 aa14.39□□□□□ -0.11
HOXC9-202ENST00000504557 DPYSL3Q14195 570 aa14.39□□□□□ -0.11
HOXC9-202ENST00000504557 DBX2Q6ZNG2 339 aa14.39□□□□□ -0.11
HOXC9-202ENST00000504557 ZSWIM9Q86XI8 627 aa14.39□□□□□ -0.11
HOXC9-202ENST00000504557 SLC22A18ASQ8N1D0 253 aa14.39□□□□□ -0.11
HOXC9-202ENST00000504557 OXR1Q8N573 874 aa14.39□□□□□ -0.11
HOXC9-202ENST00000504557 SAP25Q8TEE9 199 aa14.39□□□□□ -0.11
HOXC9-202ENST00000504557 NSMCE1Q8WV22 266 aa14.39□□□□□ -0.11
HOXC9-202ENST00000504557 CNDP2Q96KP4 475 aaKnown RBP14.39□□□□□ -0.11
HOXC9-202ENST00000504557 BMFQ96LC9 184 aa14.39□□□□□ -0.11
HOXC9-202ENST00000504557 C1QTNF2Q9BXJ5 285 aa14.39□□□□□ -0.11
HOXC9-202ENST00000504557 CPEB1Q9BZB8 566 aaKnown RBP14.39□□□□□ -0.11
HOXC9-202ENST00000504557 PCDH12Q9NPG4 1184 aa14.39□□□□□ -0.11
HOXC9-202ENST00000504557 SEPT3Q9UH03 358 aa14.39□□□□□ -0.11
HOXC9-202ENST00000504557 HYOU1Q9Y4L1 999 aa14.39□□□□□ -0.11
HOXC9-202ENST00000504557 TTLL3Q9Y4R7 772 aa14.39□□□□□ -0.11
HOXC9-202ENST00000504557 LRRD1A4D1F6 860 aa14.38□□□□□ -0.11
HOXC9-202ENST00000504557 C1QTNF9BB2RNN3 333 aa14.38□□□□□ -0.11
HOXC9-202ENST00000504557 AREL1O15033 823 aa14.38□□□□□ -0.11
HOXC9-202ENST00000504557 YKT6O15498 198 aa14.38□□□□□ -0.11
HOXC9-202ENST00000504557 TNFSF14O43557 240 aa14.38□□□□□ -0.11
HOXC9-202ENST00000504557 TM7SF2O76062 418 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms