RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 DFFAO00273 331 aa22.31■■□□□ 1.16
LSM6-203ENST00000503982 INSIG1O15503 277 aa22.31■■□□□ 1.16
LSM6-203ENST00000503982 TM7SF2O76062 418 aa22.31■■□□□ 1.16
LSM6-203ENST00000503982 CAPNS1P04632 268 aa22.31■■□□□ 1.16
LSM6-203ENST00000503982 PBX1P40424 430 aa22.31■■□□□ 1.16
LSM6-203ENST00000503982 NDST2P52849 883 aa22.31■■□□□ 1.16
LSM6-203ENST00000503982 CYTH1Q15438 398 aa22.31■■□□□ 1.16
LSM6-203ENST00000503982 CA9Q16790 459 aa22.31■■□□□ 1.16
LSM6-203ENST00000503982 FIGNQ5HY92 759 aa22.31■■□□□ 1.16
LSM6-203ENST00000503982 DENND6BQ8NEG7 585 aa22.31■■□□□ 1.16
LSM6-203ENST00000503982 NXPE2Q96DL1 559 aa22.31■■□□□ 1.16
LSM6-203ENST00000503982 IFT43Q96FT9 208 aa22.31■■□□□ 1.16
LSM6-203ENST00000503982 LENG8Q96PV6 779 aaPredicted RBP22.31■■□□□ 1.16
LSM6-203ENST00000503982 KCTD15Q96SI1 283 aaPredicted RBP22.31■■□□□ 1.16
LSM6-203ENST00000503982 SYT11Q9BT88 431 aa22.31■■□□□ 1.16
LSM6-203ENST00000503982 SP110Q9HB58 689 aa22.31■■□□□ 1.16
LSM6-203ENST00000503982 LHX3Q9UBR4 397 aa22.31■■□□□ 1.16
LSM6-203ENST00000503982 ANKRD11Q6UB99 2663 aaPredicted RBP22.31■■□□□ 1.16
LSM6-203ENST00000503982 LRRK1Q38SD2 2015 aa22.3■■□□□ 1.16
LSM6-203ENST00000503982 DMXL2Q8TDJ6 3036 aa22.3■■□□□ 1.16
LSM6-203ENST00000503982 J3KR12 359 aa22.3■■□□□ 1.16
LSM6-203ENST00000503982 DDX3XO00571 662 aaKnown RBP eCLIP22.3■■□□□ 1.165e-19■■■■□ 19.9
LSM6-203ENST00000503982 NEBLO76041 1014 aa22.3■■□□□ 1.16
LSM6-203ENST00000503982 GZMAP12544 262 aa22.3■■□□□ 1.16
LSM6-203ENST00000503982 ITIH2P19823 946 aa22.3■■□□□ 1.16
LSM6-203ENST00000503982 ACP1P24666 158 aa22.3■■□□□ 1.16
LSM6-203ENST00000503982 PAPOLAP51003 745 aaKnown RBP22.3■■□□□ 1.16
LSM6-203ENST00000503982 ELP6Q0PNE2 266 aa22.3■■□□□ 1.16
LSM6-203ENST00000503982 CAMK2BQ13554 666 aa22.3■■□□□ 1.16
LSM6-203ENST00000503982 FZD2Q14332 565 aa22.3■■□□□ 1.16
LSM6-203ENST00000503982 E4F1Q66K89 784 aaPredicted RBP22.3■■□□□ 1.16
LSM6-203ENST00000503982 LMX1AQ8TE12 382 aa22.3■■□□□ 1.16
LSM6-203ENST00000503982 HNRNPLLQ8WVV9 542 aaKnown RBP22.3■■□□□ 1.16
LSM6-203ENST00000503982 PEBP4Q96S96 227 aa22.3■■□□□ 1.16
LSM6-203ENST00000503982 CINPQ9BW66 212 aaPredicted RBP22.3■■□□□ 1.16
LSM6-203ENST00000503982 SLC39A8Q9C0K1 460 aa22.3■■□□□ 1.16
LSM6-203ENST00000503982 MRPL47Q9HD33 250 aaKnown RBP22.3■■□□□ 1.16
LSM6-203ENST00000503982 NLGN3Q9NZ94 848 aa22.3■■□□□ 1.16
LSM6-203ENST00000503982 ZZEF1O43149 2961 aa22.3■■□□□ 1.16
LSM6-203ENST00000503982 KNTC1P50748 2209 aa22.3■■□□□ 1.16
LSM6-203ENST00000503982 ACACAQ13085 2346 aa22.29■■□□□ 1.16
LSM6-203ENST00000503982 SPTY2D1-AS1A0A0U1RR47 76 aa22.29■■□□□ 1.16
LSM6-203ENST00000503982 TMEM191CA6NGB0 347 aa22.29■■□□□ 1.16
LSM6-203ENST00000503982 EIF3CLB5ME19 914 aaKnown RBP22.29■■□□□ 1.16
LSM6-203ENST00000503982 MYF5P13349 255 aa22.29■■□□□ 1.16
LSM6-203ENST00000503982 TIMP2P16035 220 aa22.29■■□□□ 1.16
LSM6-203ENST00000503982 JUNDP17535 347 aa22.29■■□□□ 1.16
LSM6-203ENST00000503982 MIPP30301 263 aa22.29■■□□□ 1.16
LSM6-203ENST00000503982 PRKCIP41743 596 aa22.29■■□□□ 1.16
LSM6-203ENST00000503982 DUSP3P51452 185 aaPredicted RBP22.29■■□□□ 1.16
LSM6-203ENST00000503982 E2F1Q01094 437 aa22.29■■□□□ 1.16
LSM6-203ENST00000503982 PTK2BQ14289 1009 aa22.29■■□□□ 1.16
LSM6-203ENST00000503982 GRM3Q14832 879 aa22.29■■□□□ 1.16
LSM6-203ENST00000503982 ERAP2Q6P179 960 aa22.29■■□□□ 1.16
LSM6-203ENST00000503982 KDM7AQ6ZMT4 941 aa22.29■■□□□ 1.16
LSM6-203ENST00000503982 RFX8Q6ZV50 586 aa22.29■■□□□ 1.16
LSM6-203ENST00000503982 IQCDQ96DY2 449 aa22.29■■□□□ 1.16
LSM6-203ENST00000503982 DCBLD2Q96PD2 775 aa22.29■■□□□ 1.16
LSM6-203ENST00000503982 EIF3CQ99613 913 aaKnown RBP22.29■■□□□ 1.16
LSM6-203ENST00000503982 DUSP23Q9BVJ7 150 aa22.29■■□□□ 1.16
LSM6-203ENST00000503982 EDEM3Q9BZQ6 932 aa22.29■■□□□ 1.16
LSM6-203ENST00000503982 TRIM7Q9C029 511 aa22.29■■□□□ 1.16
LSM6-203ENST00000503982 LRRC19Q9H756 370 aa22.29■■□□□ 1.16
LSM6-203ENST00000503982 CLCA2Q9UQC9 943 aa22.29■■□□□ 1.16
LSM6-203ENST00000503982 MFHAS1Q9Y4C4 1052 aa22.29■■□□□ 1.16
LSM6-203ENST00000503982 FAM208BQ5VWN6 2430 aa22.29■■□□□ 1.16
LSM6-203ENST00000503982 PKD1L2Q7Z442 2459 aa22.29■■□□□ 1.16
LSM6-203ENST00000503982 AREL1O15033 823 aa22.28■■□□□ 1.16
LSM6-203ENST00000503982 SCAMP1O15126 338 aa22.28■■□□□ 1.16
LSM6-203ENST00000503982 PRAMEF11O60813 436 aa22.28■■□□□ 1.16
LSM6-203ENST00000503982 PALMO75781 387 aa22.28■■□□□ 1.16
LSM6-203ENST00000503982 CSF2P04141 144 aa22.28■■□□□ 1.16
LSM6-203ENST00000503982 MYBL1P10243 752 aa22.28■■□□□ 1.16
LSM6-203ENST00000503982 ERCC2P18074 760 aa22.28■■□□□ 1.16
LSM6-203ENST00000503982 UBASH3AP57075 661 aa22.28■■□□□ 1.16
LSM6-203ENST00000503982 SARM1Q6SZW1 724 aa22.28■■□□□ 1.16
LSM6-203ENST00000503982 ZNF548Q8NEK5 533 aaPredicted RBP22.28■■□□□ 1.16
LSM6-203ENST00000503982 CPLX3Q8WVH0 158 aa22.28■■□□□ 1.16
LSM6-203ENST00000503982 ASB12Q8WXK4 309 aa22.28■■□□□ 1.16
LSM6-203ENST00000503982 APOLD1Q96LR9 279 aa22.28■■□□□ 1.16
LSM6-203ENST00000503982 KLF6Q99612 283 aaPredicted RBP22.28■■□□□ 1.16
LSM6-203ENST00000503982 CPEB1Q9BZB8 566 aaKnown RBP22.28■■□□□ 1.16
LSM6-203ENST00000503982 ABCG4Q9H172 646 aa22.28■■□□□ 1.16
LSM6-203ENST00000503982 SUV39H2Q9H5I1 410 aa22.28■■□□□ 1.16
LSM6-203ENST00000503982 DKK3Q9UBP4 350 aa22.28■■□□□ 1.16
LSM6-203ENST00000503982 COQ6Q9Y2Z9 468 aa22.28■■□□□ 1.16
LSM6-203ENST00000503982 SPINT1O43278 529 aa22.27■■□□□ 1.16
LSM6-203ENST00000503982 AQP9O43315 295 aa22.27■■□□□ 1.16
LSM6-203ENST00000503982 IGFALSP35858 605 aa22.27■■□□□ 1.16
LSM6-203ENST00000503982 INSM1Q01101 510 aaPredicted RBP22.27■■□□□ 1.16
LSM6-203ENST00000503982 SEMG2Q02383 582 aa22.27■■□□□ 1.16
LSM6-203ENST00000503982 COL28A1Q2UY09 1125 aa22.27■■□□□ 1.16
LSM6-203ENST00000503982 BTN2A2Q8WVV5 523 aa22.27■■□□□ 1.16
LSM6-203ENST00000503982 IL12RB2Q99665 862 aa22.27■■□□□ 1.16
LSM6-203ENST00000503982 ATP13A3Q9H7F0 1226 aa22.27■■□□□ 1.16
LSM6-203ENST00000503982 ZWILCHQ9H900 591 aa22.27■■□□□ 1.16
LSM6-203ENST00000503982 APOBEC3BQ9UH17 382 aaKnown RBP22.27■■□□□ 1.16
LSM6-203ENST00000503982 SHROOM3Q8TF72 1996 aa22.27■■□□□ 1.15
LSM6-203ENST00000503982 ZFHX4Q86UP3 3567 aa22.27■■□□□ 1.15
LSM6-203ENST00000503982 K7ESM1 405 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms