RNA–Protein interactions for RNA: ENST00000502557.5

CCHCR1-216, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-216ENST00000502557 C10orf88Q9H8K7 445 aa18.01■□□□□ 0.47
CCHCR1-216ENST00000502557 NCDNQ9UBB6 729 aa18.01■□□□□ 0.47
CCHCR1-216ENST00000502557 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.01■□□□□ 0.47
CCHCR1-216ENST00000502557 JRKLQ9Y4A0 524 aa18.01■□□□□ 0.47
CCHCR1-216ENST00000502557 TTLL3Q9Y4R7 772 aa18.01■□□□□ 0.47
CCHCR1-216ENST00000502557 PCDHGC4Q9Y5F7 938 aa18.01■□□□□ 0.47
CCHCR1-216ENST00000502557 PCDHGA5Q9Y5G8 931 aa18.01■□□□□ 0.47
CCHCR1-216ENST00000502557 FADS3Q9Y5Q0 445 aa18.01■□□□□ 0.47
CCHCR1-216ENST00000502557 TBC1D3DA0A087WVF3 549 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 TBC1D3IA0A087WXS9 549 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 TBC1D3EA0A087X179 549 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 TBC1D3KA0A087X1G2 549 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 GOLGA6L9A6NEM1 432 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 TBC1D3FA6NER0 549 aaPredicted RBP18■□□□□ 0.47
CCHCR1-216ENST00000502557 MEI4A8MW99 385 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 TBC1D3LB9A6J9 549 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 ENC1O14682 589 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 SPINT1O43278 529 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 KIF5CO60282 957 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 GFRA3O60609 400 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 IGHV4-34P06331 123 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 TBC1D3HP0C7X1 549 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 PTPN3P26045 913 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 EIF3EP60228 445 aaKnown RBP18■□□□□ 0.47
CCHCR1-216ENST00000502557 PPP2CBP62714 309 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 PPP2CAP67775 309 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 CREB5Q02930 508 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 WASHC5Q12768 1159 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 IHHQ14623 411 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 TEX44Q53QW1 395 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 SYCP2LQ5T4T6 812 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 TBC1D3GQ6DHY5 549 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 TBC1D3CQ6IPX1 549 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 BRAT1Q6PJG6 821 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 TTC7BQ86TV6 843 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 SLC13A5Q86YT5 568 aaPredicted RBP18■□□□□ 0.47
CCHCR1-216ENST00000502557 TBC1D3Q8IZP1 549 aaPredicted RBP18■□□□□ 0.47
CCHCR1-216ENST00000502557 DCLK2Q8N568 766 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18■□□□□ 0.47
CCHCR1-216ENST00000502557 DNASE2BQ8WZ79 361 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 RUBCNQ92622 972 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 PIGKQ92643 395 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 RAB7BQ96AH8 199 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 BIRC7Q96CA5 298 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 ECHDC3Q96DC8 303 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 PREBQ9HCU5 417 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 TMEM74BQ9NUR3 256 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 HAUS2Q9NVX0 235 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 R3HDM2Q9Y2K5 976 aaKnown RBP18■□□□□ 0.47
CCHCR1-216ENST00000502557 WDFY4Q6ZS81 3184 aa18■□□□□ 0.47
CCHCR1-216ENST00000502557 ATXN2Q99700 1313 aaKnown RBP17.99■□□□□ 0.47
CCHCR1-216ENST00000502557 AREL1O15033 823 aa17.99■□□□□ 0.47
CCHCR1-216ENST00000502557 MTSS1O43312 755 aa17.99■□□□□ 0.47
CCHCR1-216ENST00000502557 HTRA2O43464 458 aaPredicted RBP17.99■□□□□ 0.47
CCHCR1-216ENST00000502557 AP1G1O43747 822 aa17.99■□□□□ 0.47
CCHCR1-216ENST00000502557 RBP3P10745 1247 aa17.99■□□□□ 0.47
CCHCR1-216ENST00000502557 CES1P23141 567 aa17.99■□□□□ 0.47
CCHCR1-216ENST00000502557 MAOBP27338 520 aa17.99■□□□□ 0.47
CCHCR1-216ENST00000502557 RBL1P28749 1068 aa17.99■□□□□ 0.47
CCHCR1-216ENST00000502557 MPLP40238 635 aa17.99■□□□□ 0.47
CCHCR1-216ENST00000502557 CCR5P51681 352 aa17.99■□□□□ 0.47
CCHCR1-216ENST00000502557 TRAF2Q12933 501 aa17.99■□□□□ 0.47
CCHCR1-216ENST00000502557 LRRC73Q5JTD7 316 aa17.99■□□□□ 0.47
CCHCR1-216ENST00000502557 WDR45BQ5MNZ6 344 aa17.99■□□□□ 0.47
CCHCR1-216ENST00000502557 PEAR1Q5VY43 1037 aaPredicted RBP17.99■□□□□ 0.47
CCHCR1-216ENST00000502557 TRIM69Q86WT6 500 aa17.99■□□□□ 0.47
CCHCR1-216ENST00000502557 SYT12Q8IV01 421 aa17.99■□□□□ 0.47
CCHCR1-216ENST00000502557 CDKL3Q8IVW4 592 aaPredicted RBP17.99■□□□□ 0.47
CCHCR1-216ENST00000502557 TTC13Q8NBP0 860 aa17.99■□□□□ 0.47
CCHCR1-216ENST00000502557 HTR3CQ8WXA8 447 aa17.99■□□□□ 0.47
CCHCR1-216ENST00000502557 SNX19Q92543 992 aa17.99■□□□□ 0.47
CCHCR1-216ENST00000502557 AGAP3Q96P47 875 aa17.99■□□□□ 0.47
CCHCR1-216ENST00000502557 PILRBQ9UKJ0 227 aa17.99■□□□□ 0.47
CCHCR1-216ENST00000502557 ITM2BQ9Y287 266 aa17.99■□□□□ 0.47
CCHCR1-216ENST00000502557 UPK3BL1B0FP48 263 aa17.98■□□□□ 0.47
CCHCR1-216ENST00000502557 UPK3BL2E5RIL1 263 aa17.98■□□□□ 0.47
CCHCR1-216ENST00000502557 RNGTTO60942 597 aaKnown RBP17.98■□□□□ 0.47
CCHCR1-216ENST00000502557 SOCS5O75159 536 aa17.98■□□□□ 0.47
CCHCR1-216ENST00000502557 MMP2P08253 660 aa17.98■□□□□ 0.47
CCHCR1-216ENST00000502557 ITIH2P19823 946 aa17.98■□□□□ 0.47
CCHCR1-216ENST00000502557 CXCR5P32302 372 aa17.98■□□□□ 0.47
CCHCR1-216ENST00000502557 CCDC6Q16204 474 aa17.98■□□□□ 0.47
CCHCR1-216ENST00000502557 UGP2Q16851 508 aa17.98■□□□□ 0.47
CCHCR1-216ENST00000502557 CFAP58Q5T655 872 aa17.98■□□□□ 0.47
CCHCR1-216ENST00000502557 NEK5Q6P3R8 708 aa17.98■□□□□ 0.47
CCHCR1-216ENST00000502557 RGL4Q8IZJ4 473 aa17.98■□□□□ 0.47
CCHCR1-216ENST00000502557 SPOCK2Q92563 424 aa17.98■□□□□ 0.47
CCHCR1-216ENST00000502557 TEKT5Q96M29 485 aa17.98■□□□□ 0.47
CCHCR1-216ENST00000502557 ORAI3Q9BRQ5 295 aa17.98■□□□□ 0.47
CCHCR1-216ENST00000502557 EBF2Q9HAK2 575 aa17.98■□□□□ 0.47
CCHCR1-216ENST00000502557 EIF2B4Q9UI10 523 aaKnown RBP17.98■□□□□ 0.47
CCHCR1-216ENST00000502557 GGT7Q9UJ14 662 aa17.98■□□□□ 0.47
CCHCR1-216ENST00000502557 ZFR2Q9UPR6 939 aaKnown RBP17.98■□□□□ 0.47
CCHCR1-216ENST00000502557 RAI2Q9Y5P3 530 aa17.98■□□□□ 0.47
CCHCR1-216ENST00000502557 A0A1W2PQU0 124 aa17.97■□□□□ 0.47
CCHCR1-216ENST00000502557 LATO43561 262 aa17.97■□□□□ 0.47
CCHCR1-216ENST00000502557 PCDH8O95206 1070 aa17.97■□□□□ 0.47
CCHCR1-216ENST00000502557 ATP1A1P05023 1023 aaKnown RBP17.97■□□□□ 0.47
CCHCR1-216ENST00000502557 XPAP23025 273 aaPredicted RBP17.97■□□□□ 0.47
CCHCR1-216ENST00000502557 MSNP26038 577 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms