RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 KLHL24Q6TFL4 600 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 LDHAL6AQ6ZMR3 332 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 NEK10Q6ZWH5 1172 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 ANKRD18AQ8IVF6 992 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 CLEC18CQ8NCF0 446 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 RUFY2Q8WXA3 655 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 RAB40AQ8WXH6 277 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 ZC3HAV1LQ96H79 300 aaKnown RBP2.59□□□□□ -1.99
SMAD1-203ENST00000502342 FAM84BQ96KN1 310 aaPredicted RBP2.59□□□□□ -1.99
SMAD1-203ENST00000502342 SCLT1Q96NL6 688 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 FIZ1Q96SL8 496 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 REEP2Q9BRK0 252 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 ISCA1Q9BUE6 129 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 LMAN2LQ9H0V9 348 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 RETREG1Q9H6L5 497 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 CLK4Q9HAZ1 481 aaKnown RBP2.59□□□□□ -1.99
SMAD1-203ENST00000502342 PLSCR4Q9NRQ2 329 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 BABAM1Q9NWV8 329 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 ANKRD10Q9NXR5 420 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 OR6C3Q9NZP0 311 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 AGO1Q9UL18 857 aaKnown RBP2.59□□□□□ -1.99
SMAD1-203ENST00000502342 NOTCH4Q99466 2003 aa2.59□□□□□ -2
SMAD1-203ENST00000502342 IFRD1O00458 451 aaPredicted RBP2.58□□□□□ -2
SMAD1-203ENST00000502342 PPP1R3DO95685 299 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 CH25HO95992 272 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 PCNAP12004 261 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 DCTDP32321 178 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 TTKP33981 857 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 PIGAP37287 484 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 PPM1FP49593 454 aaPredicted RBP2.58□□□□□ -2
SMAD1-203ENST00000502342 CXCR3P49682 368 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 GAS1P54826 345 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 TUBA1BP68363 451 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 ADORA2A-AS1P86434 159 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 EEF1A2Q05639 463 aaKnown RBP2.58□□□□□ -2
SMAD1-203ENST00000502342 VEPH1Q14D04 833 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 SF3B4Q15427 424 aaKnown RBP eCLIP2.58□□□□□ -2
SMAD1-203ENST00000502342 XKR9Q5GH70 373 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 WDR45BQ5MNZ6 344 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 ATG16L1Q676U5 607 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.58□□□□□ -2
SMAD1-203ENST00000502342 C16orf82Q7Z2V1 217 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 GPAT4Q86UL3 456 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 CCDC105Q8IYK2 499 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 PGBD5Q8N414 524 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 TMEM170AQ8WVE7 144 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 MTBPQ96DY7 904 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 DOCK7Q96N67 2140 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 DUX5Q96PT3 197 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 TWNKQ96RR1 684 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 C1QTNF4Q9BXJ3 329 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 VPS33BQ9H267 617 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 IL25Q9H293 177 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 EPHX3Q9H6B9 360 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 PEMTQ9UBM1 199 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 MALT1Q9UDY8 824 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 NDRG3Q9UGV2 375 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 CNOT7Q9UIV1 285 aaKnown RBP2.58□□□□□ -2
SMAD1-203ENST00000502342 ADGRF5Q8IZF2 1346 aa2.58□□□□□ -2
SMAD1-203ENST00000502342 LOC102724159A0A0B4J2E5 919 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 hDV102S1A0JD36 115 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 PABPN1LA6NDY0 278 aaKnown RBP2.57□□□□□ -2
SMAD1-203ENST00000502342 FAM90A7PA6NKC0 464 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 FAM90A22PA8MWA6 464 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 FAM90A12PA8MX19 464 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 FAM90A23PA8MXZ1 464 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 KLRF2D3W0D1 207 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 EIF3FO00303 357 aaPredicted RBP2.57□□□□□ -2
SMAD1-203ENST00000502342 TIMM23O14925 209 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 GUCY1B2O75343 617 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 CAMTA2O94983 1202 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 AFPP02771 609 aaKnown RBP2.57□□□□□ -2
SMAD1-203ENST00000502342 PTPN2P17706 415 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 CNTFP26441 200 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 SSTR2P30874 369 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 GPD2P43304 727 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 CDH15P55291 814 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 UBE3AQ05086 875 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 CHRNDQ07001 517 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 KIF5AQ12840 1032 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 COASYQ13057 564 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 MYBPHQ13203 477 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 BIRC3Q13489 604 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 EFR3AQ14156 821 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 NEDD9Q14511 834 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 PWP2Q15269 919 aaKnown RBP2.57□□□□□ -2
SMAD1-203ENST00000502342 SOWAHAQ2M3V2 549 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 RHBDF2Q6PJF5 856 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 SHFQ7M4L6 423 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 TBC1D26Q86UD7 250 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 FAM160B2Q86V87 743 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 ZNF354CQ86Y25 554 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 KIAA2013Q8IYS2 634 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 GJC3Q8NFK1 279 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 TNIP2Q8NFZ5 429 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 RFWD2Q8NHY2 731 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 ARRDC2Q8TBH0 407 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 IGSF21Q96ID5 467 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 LRFN5Q96NI6 719 aa2.57□□□□□ -2
SMAD1-203ENST00000502342 ZNF570Q96NI8 536 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms