RNA–Protein interactions for RNA: ENST00000500090.2

YIPF3-209, Transcript of Yip1 domain family member 3, humanhuman

TSL 3

Gene YIPF3, Length 406 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-209ENST00000500090 TMEM74BQ9NUR3 256 aa12.4□□□□□ -0.42
YIPF3-209ENST00000500090 EIF2B4Q9UI10 523 aaKnown RBP12.4□□□□□ -0.42
YIPF3-209ENST00000500090 DMXL1Q9Y485 3027 aa12.4□□□□□ -0.43
YIPF3-209ENST00000500090 SHROOM3Q8TF72 1996 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 TNRC6BQ9UPQ9 1833 aaKnown RBP12.39□□□□□ -0.43
YIPF3-209ENST00000500090 A0A1B0GTW7 788 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 A0A1W2PPC4 97 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 A0A1W2PQ67 120 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 TSPAN11A1L157 253 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 RNF103O00237 685 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 PLK4O00444 970 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 MUSKO15146 869 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 BCAT2O15382 392 aaPredicted RBP12.39□□□□□ -0.43
YIPF3-209ENST00000500090 INSIG1O15503 277 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 LATO43561 262 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 TSPAN6O43657 245 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 MAP3K6O95382 1288 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 IGHV4-34P06331 123 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 SERPINF2P08697 491 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 KRT10P13645 584 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 CR2P20023 1033 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 MAOBP27338 520 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 RGRP47804 291 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 TAS2R38P59533 333 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 POLR2LP62875 67 aaKnown RBP12.39□□□□□ -0.43
YIPF3-209ENST00000500090 DYNLT1P63172 113 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 ARHGAP8P85298 464 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 LMNB2Q03252 620 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 BCL2L1Q07817 233 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 TRIM61Q5EBN2 209 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 CFAP58Q5T655 872 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 BBS12Q6ZW61 710 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 PARS2Q7L3T8 475 aaKnown RBP12.39□□□□□ -0.43
YIPF3-209ENST00000500090 KIAA2013Q8IYS2 634 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 C1orf216Q8TAB5 229 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 SNX19Q92543 992 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 ALS2CR12Q96Q35 445 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 LGMNQ99538 433 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 OSBPL8Q9BZF1 889 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 POLR1EQ9GZS1 481 aaKnown RBP12.39□□□□□ -0.43
YIPF3-209ENST00000500090 MIR1-1HGQ9H1L0 117 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 SCUBE2Q9NQ36 999 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 RBM22Q9NW64 420 aaKnown RBP eCLIP12.39□□□□□ -0.43
YIPF3-209ENST00000500090 SLC6A14Q9UN76 642 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 DMTF1Q9Y222 760 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 PPP2R2CQ9Y2T4 447 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 FADS3Q9Y5Q0 445 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 CAPN6Q9Y6Q1 641 aa12.39□□□□□ -0.43
YIPF3-209ENST00000500090 APOC4-APOC2K7ER74 178 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 MTSS1O43312 755 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 SOCS5O75159 536 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 TJP3O95049 919 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 PCDH8O95206 1070 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 PIGNO95427 931 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 FTCDO95954 541 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 APOC2P02655 101 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 CFIP05156 583 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 SYPP08247 313 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 TIMP2P16035 220 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 XPAP23025 273 aaPredicted RBP12.38□□□□□ -0.43
YIPF3-209ENST00000500090 AFF3P51826 1226 aaKnown RBP12.38□□□□□ -0.43
YIPF3-209ENST00000500090 RPS21P63220 83 aaKnown RBP12.38□□□□□ -0.43
YIPF3-209ENST00000500090 RACK1P63244 317 aaKnown RBP12.38□□□□□ -0.43
YIPF3-209ENST00000500090 IFI35P80217 286 aaPredicted RBP12.38□□□□□ -0.43
YIPF3-209ENST00000500090 AP1B1Q10567 949 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 TEAD4Q15561 434 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 CCDC6Q16204 474 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 SETMARQ53H47 684 aaPredicted RBP12.38□□□□□ -0.43
YIPF3-209ENST00000500090 CCDC181Q5TID7 509 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 ALG1LQ6GMV1 187 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 KIAA1161Q6NSJ0 714 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 NPNTQ6UXI9 565 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 HORMAD1Q86X24 394 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 CAMK1DQ8IU85 385 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 PGBD5Q8N414 524 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 TRIM58Q8NG06 486 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 TFB1MQ8WVM0 346 aaKnown RBP12.38□□□□□ -0.43
YIPF3-209ENST00000500090 SPOCK2Q92563 424 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 ALG3Q92685 438 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 SKA1Q96BD8 255 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 ECHDC3Q96DC8 303 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 HES6Q96HZ4 224 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 ZDHHC5Q9C0B5 715 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 CAPN10Q9HC96 672 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 NT5MQ9NPB1 228 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 LZTFL1Q9NQ48 299 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 TRPM6Q9BX84 2022 aa12.38□□□□□ -0.43
YIPF3-209ENST00000500090 ATXN2Q99700 1313 aaKnown RBP12.37□□□□□ -0.43
YIPF3-209ENST00000500090 A0A1W2PQU0 124 aa12.37□□□□□ -0.43
YIPF3-209ENST00000500090 HACD1B0YJ81 288 aa12.37□□□□□ -0.43
YIPF3-209ENST00000500090 NEMP1O14524 444 aa12.37□□□□□ -0.43
YIPF3-209ENST00000500090 TRAFD1O14545 582 aaPredicted RBP12.37□□□□□ -0.43
YIPF3-209ENST00000500090 AREL1O15033 823 aa12.37□□□□□ -0.43
YIPF3-209ENST00000500090 DDX3YO15523 660 aaKnown RBP12.37□□□□□ -0.43
YIPF3-209ENST00000500090 RNGTTO60942 597 aaKnown RBP12.37□□□□□ -0.43
YIPF3-209ENST00000500090 ZNF189O75820 626 aaPredicted RBP12.37□□□□□ -0.43
YIPF3-209ENST00000500090 JCHAINP01591 159 aa12.37□□□□□ -0.43
YIPF3-209ENST00000500090 PYGMP11217 842 aa12.37□□□□□ -0.43
YIPF3-209ENST00000500090 SDHBP21912 280 aa12.37□□□□□ -0.43
YIPF3-209ENST00000500090 NFKBIAP25963 317 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms