RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 MACC1Q6ZN28 852 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 TMPRSS9Q7Z410 1059 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 SETD3Q86TU7 594 aaPredicted RBP9.25□□□□□ -0.93
CCDC171-209ENST00000498725 TTC7BQ86TV6 843 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 GKN2Q86XP6 184 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 WDTC1Q8N5D0 677 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 PCDH20Q8N6Y1 951 aaKnown RBP9.25□□□□□ -0.93
CCDC171-209ENST00000498725 EFCAB3Q8N7B9 438 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 NETO2Q8NC67 525 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 DENND6BQ8NEG7 585 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 CXorf40AQ8TE69 158 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 STK32AQ8WU08 396 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 EPAS1Q99814 870 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 INTS2Q9H0H0 1204 aaKnown RBP9.25□□□□□ -0.93
CCDC171-209ENST00000498725 SEMA6CQ9H3T2 930 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 SYNCQ9H7C4 482 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 PLCB1Q9NQ66 1216 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 RNF215Q9Y6U7 377 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 B4DGG1 531 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 DAB1O75553 588 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 ZMPSTE24O75844 475 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 RASGRP1O95267 797 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 CCL4P13236 92 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 ACVRL1P37023 503 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 HK3P52790 923 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 POLE2P56282 527 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 YPEL5P62699 121 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 KRT85P78386 507 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 ARF5P84085 180 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 FOXK1P85037 733 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 GCNT1Q02742 428 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 GNA12Q03113 381 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 DEUP1Q05D60 604 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 MORC3Q14149 939 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 ARHGEF7Q14155 803 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 C16orf72Q14CZ0 275 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 NCAPHQ15003 741 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 ALG11Q2TAA5 492 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 AMZ1Q400G9 498 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 C5orf22Q49AR2 442 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 MAP9Q49MG5 647 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 ZNF805Q5CZA5 627 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 ATXN7L2Q5T6C5 722 aaPredicted RBP9.24□□□□□ -0.93
CCDC171-209ENST00000498725 KLHL10Q6JEL2 608 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 C11orf57Q6ZUT1 292 aaPredicted RBP9.24□□□□□ -0.93
CCDC171-209ENST00000498725 TAF8Q7Z7C8 310 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 ZNF683Q8IZ20 524 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 FSTL5Q8N475 847 aaPredicted RBP9.24□□□□□ -0.93
CCDC171-209ENST00000498725 IL22RA1Q8N6P7 574 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 TP53I13Q8NBR0 393 aaPredicted RBP9.24□□□□□ -0.93
CCDC171-209ENST00000498725 C1orf131Q8NDD1 294 aaKnown RBP9.24□□□□□ -0.93
CCDC171-209ENST00000498725 RCBTB1Q8NDN9 531 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 RAB7BQ96AH8 199 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 TBCBQ99426 244 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 CMKLR1Q99788 373 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 SLC12A9Q9BXP2 914 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 EDEM3Q9BZQ6 932 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 CEP44Q9C0F1 390 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 SUDS3Q9H7L9 328 aaPredicted RBP9.24□□□□□ -0.93
CCDC171-209ENST00000498725 RDH14Q9HBH5 336 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 GDPD2Q9HCC8 539 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 LRRC4CQ9HCJ2 640 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 RMND1Q9NWS8 449 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 ACSL6Q9UKU0 697 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 PLAAQ9Y263 795 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 DAAM1Q9Y4D1 1078 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 OR1A2Q9Y585 309 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 TEX15Q9BXT5 2789 aa9.24□□□□□ -0.93
CCDC171-209ENST00000498725 ILVBLA1L0T0 632 aa9.23□□□□□ -0.93
CCDC171-209ENST00000498725 DRGXA6NNA5 263 aa9.23□□□□□ -0.93
CCDC171-209ENST00000498725 PCCBP05166 539 aa9.23□□□□□ -0.93
CCDC171-209ENST00000498725 GLI1P08151 1106 aa9.23□□□□□ -0.93
CCDC171-209ENST00000498725 PRKAR1AP10644 381 aa9.23□□□□□ -0.93
CCDC171-209ENST00000498725 CXCR3P49682 368 aa9.23□□□□□ -0.93
CCDC171-209ENST00000498725 BLKP51451 505 aa9.23□□□□□ -0.93
CCDC171-209ENST00000498725 SRP54P61011 504 aaKnown RBP9.23□□□□□ -0.93
CCDC171-209ENST00000498725 SLC6A3Q01959 620 aa9.23□□□□□ -0.93
CCDC171-209ENST00000498725 APBA1Q02410 837 aa9.23□□□□□ -0.93
CCDC171-209ENST00000498725 LRRC63Q05C16 580 aa9.23□□□□□ -0.93
CCDC171-209ENST00000498725 BRMS1LQ5PSV4 323 aa9.23□□□□□ -0.93
CCDC171-209ENST00000498725 KCTD16Q68DU8 428 aa9.23□□□□□ -0.93
CCDC171-209ENST00000498725 OLFML1Q6UWY5 402 aa9.23□□□□□ -0.93
CCDC171-209ENST00000498725 GDPD4Q6W3E5 623 aa9.23□□□□□ -0.93
CCDC171-209ENST00000498725 DTX1Q86Y01 620 aa9.23□□□□□ -0.93
CCDC171-209ENST00000498725 ZNF354CQ86Y25 554 aa9.23□□□□□ -0.93
CCDC171-209ENST00000498725 FAM46DQ8NEK8 389 aa9.23□□□□□ -0.93
CCDC171-209ENST00000498725 ASB12Q8WXK4 309 aa9.23□□□□□ -0.93
CCDC171-209ENST00000498725 PMEPA1Q969W9 287 aa9.23□□□□□ -0.93
CCDC171-209ENST00000498725 TBATAQ96M53 351 aa9.23□□□□□ -0.93
CCDC171-209ENST00000498725 CRACR2AQ9BSW2 395 aa9.23□□□□□ -0.93
CCDC171-209ENST00000498725 C1QTNF7Q9BXJ2 289 aa9.23□□□□□ -0.93
CCDC171-209ENST00000498725 SRRTQ9BXP5 876 aaKnown RBP9.23□□□□□ -0.93
CCDC171-209ENST00000498725 ADNPQ9H2P0 1102 aa9.23□□□□□ -0.93
CCDC171-209ENST00000498725 ASNSD1Q9NWL6 643 aa9.23□□□□□ -0.93
CCDC171-209ENST00000498725 ARHGEF38Q9NXL2 777 aa9.23□□□□□ -0.93
CCDC171-209ENST00000498725 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.23□□□□□ -0.93
CCDC171-209ENST00000498725 LRIT1Q9P2V4 623 aa9.23□□□□□ -0.93
CCDC171-209ENST00000498725 KLQ9UEF7 1012 aa9.23□□□□□ -0.93
CCDC171-209ENST00000498725 DNAI1Q9UI46 699 aa9.23□□□□□ -0.93
CCDC171-209ENST00000498725 MOSPD1Q9UJG1 213 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms