RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 JUNDP17535 347 aa11.91□□□□□ -0.5
NUDCD3-211ENST00000497978 TNFAIP3P21580 790 aa11.91□□□□□ -0.5
NUDCD3-211ENST00000497978 ACTN2P35609 894 aa11.91□□□□□ -0.5
NUDCD3-211ENST00000497978 SUOXP51687 545 aa11.91□□□□□ -0.5
NUDCD3-211ENST00000497978 TPI1P60174 286 aa11.91□□□□□ -0.5
NUDCD3-211ENST00000497978 RPL7AP62424 266 aaKnown RBP11.91□□□□□ -0.5
NUDCD3-211ENST00000497978 SERINC3Q13530 473 aa11.91□□□□□ -0.5
NUDCD3-211ENST00000497978 COL9A2Q14055 689 aaPredicted RBP11.91□□□□□ -0.5
NUDCD3-211ENST00000497978 GRM3Q14832 879 aa11.91□□□□□ -0.5
NUDCD3-211ENST00000497978 CCDC183Q5T5S1 534 aa11.91□□□□□ -0.5
NUDCD3-211ENST00000497978 ZCCHC8Q6NZY4 707 aaKnown RBP11.91□□□□□ -0.5
NUDCD3-211ENST00000497978 VPS36Q86VN1 386 aa11.91□□□□□ -0.5
NUDCD3-211ENST00000497978 MCOLN2Q8IZK6 566 aa11.91□□□□□ -0.5
NUDCD3-211ENST00000497978 UMODL1-AS1Q8N2C9 162 aa11.91□□□□□ -0.5
NUDCD3-211ENST00000497978 ZNF548Q8NEK5 533 aaPredicted RBP11.91□□□□□ -0.5
NUDCD3-211ENST00000497978 HMCESQ96FZ2 354 aa11.91□□□□□ -0.5
NUDCD3-211ENST00000497978 VCPIP1Q96JH7 1222 aa11.91□□□□□ -0.5
NUDCD3-211ENST00000497978 DEPDC7Q96QD5 511 aa11.91□□□□□ -0.5
NUDCD3-211ENST00000497978 IL12RB2Q99665 862 aa11.91□□□□□ -0.5
NUDCD3-211ENST00000497978 NOL6Q9H6R4 1146 aaKnown RBP11.91□□□□□ -0.5
NUDCD3-211ENST00000497978 SPASTQ9UBP0 616 aa11.91□□□□□ -0.5
NUDCD3-211ENST00000497978 DKK3Q9UBP4 350 aa11.91□□□□□ -0.5
NUDCD3-211ENST00000497978 GGT7Q9UJ14 662 aa11.91□□□□□ -0.5
NUDCD3-211ENST00000497978 MYO6Q9UM54 1294 aa11.91□□□□□ -0.5
NUDCD3-211ENST00000497978 MFHAS1Q9Y4C4 1052 aa11.91□□□□□ -0.5
NUDCD3-211ENST00000497978 EIF4E1BA6NMX2 242 aaKnown RBP11.9□□□□□ -0.5
NUDCD3-211ENST00000497978 TOR1BO14657 336 aa11.9□□□□□ -0.5
NUDCD3-211ENST00000497978 AREL1O15033 823 aa11.9□□□□□ -0.5
NUDCD3-211ENST00000497978 OPA1O60313 960 aa11.9□□□□□ -0.5
NUDCD3-211ENST00000497978 MMP20O60882 483 aa11.9□□□□□ -0.5
NUDCD3-211ENST00000497978 NEBLO76041 1014 aa11.9□□□□□ -0.5
NUDCD3-211ENST00000497978 GIMD1P0DJR0 217 aa11.9□□□□□ -0.5
NUDCD3-211ENST00000497978 EIF2S3P41091 472 aaKnown RBP11.9□□□□□ -0.5
NUDCD3-211ENST00000497978 PFN3P60673 137 aa11.9□□□□□ -0.5
NUDCD3-211ENST00000497978 YPEL5P62699 121 aa11.9□□□□□ -0.5
NUDCD3-211ENST00000497978 ELP6Q0PNE2 266 aa11.9□□□□□ -0.5
NUDCD3-211ENST00000497978 CFAP58Q5T655 872 aa11.9□□□□□ -0.5
NUDCD3-211ENST00000497978 DNAAF5Q86Y56 855 aa11.9□□□□□ -0.5
NUDCD3-211ENST00000497978 AOPEPQ8N6M6 819 aa11.9□□□□□ -0.5
NUDCD3-211ENST00000497978 HCAR2Q8TDS4 363 aa11.9□□□□□ -0.5
NUDCD3-211ENST00000497978 LMX1AQ8TE12 382 aa11.9□□□□□ -0.5
NUDCD3-211ENST00000497978 FGF11Q92914 225 aa11.9□□□□□ -0.5
NUDCD3-211ENST00000497978 GLMNQ92990 594 aa11.9□□□□□ -0.5
NUDCD3-211ENST00000497978 CENPTQ96BT3 561 aa11.9□□□□□ -0.5
NUDCD3-211ENST00000497978 CPEB1Q9BZB8 566 aaKnown RBP11.9□□□□□ -0.5
NUDCD3-211ENST00000497978 KLC2Q9H0B6 622 aa11.9□□□□□ -0.5
NUDCD3-211ENST00000497978 PARVAQ9NVD7 372 aa11.9□□□□□ -0.5
NUDCD3-211ENST00000497978 UBA2Q9UBT2 640 aaPredicted RBP11.9□□□□□ -0.5
NUDCD3-211ENST00000497978 ZFYVE26Q68DK2 2539 aa11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 FREM2Q5SZK8 3169 aa11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 ARHGAP42A6NI28 874 aa11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 EIF3CLB5ME19 914 aaKnown RBP11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 TPP1O14773 563 aa11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 SPINT1O43278 529 aa11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 DAPK3O43293 454 aa11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 TLX3O43711 291 aaPredicted RBP11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 BRINP1O60477 761 aa11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 TIMP2P16035 220 aa11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 PSMA2P25787 234 aa11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 RPIAP49247 311 aa11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 NDST2P52849 883 aa11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 TYRO3Q06418 890 aa11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 NCAPHQ15003 741 aa11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 CYTH1Q15438 398 aa11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 FILIP1LQ4L180 1135 aa11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 SOWAHCQ53LP3 525 aaPredicted RBP11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 LRRC73Q5JTD7 316 aa11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 CDCP2Q5VXM1 449 aa11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 APTXQ7Z2E3 356 aaKnown RBP11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 IRF2BP2Q7Z5L9 587 aa11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 SNIP1Q8TAD8 396 aaKnown RBP11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 IFI44Q8TCB0 444 aa11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 MAPK15Q8TD08 544 aa11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 EIF3CQ99613 913 aaKnown RBP11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 WRAP53Q9BUR4 548 aaKnown RBP11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 SLC13A1Q9BZW2 595 aa11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 HSD3B7Q9H2F3 369 aa11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 APOBEC3BQ9UH17 382 aaKnown RBP11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 SALL4Q9UJQ4 1053 aa11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 AP4E1Q9UPM8 1137 aa11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 PCDHGA10Q9Y5H3 936 aa11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 WDFY3Q8IZQ1 3526 aa11.89□□□□□ -0.51
NUDCD3-211ENST00000497978 LY6G6EA0A0G2JKS1 128 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 CPED1A4D0V7 1026 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 TMEM110-MUSTN1A8MSY1 372 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 SMTNL1A8MU46 457 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 TMCO5BA8MYB1 307 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 EEF2KO00418 725 aaKnown RBP11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 GPR37O15354 613 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 INSIG1O15503 277 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 RNF8O76064 485 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 PIGNO95427 931 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 ANXA6P08133 673 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 MYF5P13349 255 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 ATP1A3P13637 1013 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 IGFALSP35858 605 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 BLKP51451 505 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 PPARDQ03181 441 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 EIF2B5Q13144 721 aaKnown RBP11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 MAMLD1Q13495 774 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms