RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-223ENST00000497318 IGLV3-10A0A075B6K4 115 aa16.8■□□□□ 0.28
SUPT20H-223ENST00000497318 PRAMEF33A0A0G2JMD5 474 aa16.8■□□□□ 0.28
SUPT20H-223ENST00000497318 KRIT1O00522 736 aa16.8■□□□□ 0.28
SUPT20H-223ENST00000497318 PRAMEF10O60809 474 aa16.8■□□□□ 0.28
SUPT20H-223ENST00000497318 IGFALSP35858 605 aa16.8■□□□□ 0.28
SUPT20H-223ENST00000497318 ABL2P42684 1182 aa16.8■□□□□ 0.28
SUPT20H-223ENST00000497318 GNA12Q03113 381 aa16.8■□□□□ 0.28
SUPT20H-223ENST00000497318 SRSF6Q13247 344 aaKnown RBP16.8■□□□□ 0.28
SUPT20H-223ENST00000497318 ZFAND4Q86XD8 727 aa16.8■□□□□ 0.28
SUPT20H-223ENST00000497318 CCNJLQ8IV13 435 aa16.8■□□□□ 0.28
SUPT20H-223ENST00000497318 WDTC1Q8N5D0 677 aa16.8■□□□□ 0.28
SUPT20H-223ENST00000497318 PGAP3Q96FM1 320 aaPredicted RBP16.8■□□□□ 0.28
SUPT20H-223ENST00000497318 NPY6RQ99463 290 aa16.8■□□□□ 0.28
SUPT20H-223ENST00000497318 TM6SF2Q9BZW4 377 aa16.8■□□□□ 0.28
SUPT20H-223ENST00000497318 ZYG11BQ9C0D3 744 aa16.8■□□□□ 0.28
SUPT20H-223ENST00000497318 ACP6Q9NPH0 428 aa16.8■□□□□ 0.28
SUPT20H-223ENST00000497318 RABGEF1Q9UJ41 708 aa16.8■□□□□ 0.28
SUPT20H-223ENST00000497318 HPCAL4Q9UM19 191 aa16.8■□□□□ 0.28
SUPT20H-223ENST00000497318 ITM2BQ9Y287 266 aa16.8■□□□□ 0.28
SUPT20H-223ENST00000497318 SNX10Q9Y5X0 201 aa16.8■□□□□ 0.28
SUPT20H-223ENST00000497318 SPTAN1Q13813 2472 aaKnown RBP16.8■□□□□ 0.28
SUPT20H-223ENST00000497318 A0A1W2PQM1 296 aa16.79■□□□□ 0.28
SUPT20H-223ENST00000497318 AREL1O15033 823 aa16.79■□□□□ 0.28
SUPT20H-223ENST00000497318 MMP20O60882 483 aa16.79■□□□□ 0.28
SUPT20H-223ENST00000497318 KRT9P35527 623 aa16.79■□□□□ 0.28
SUPT20H-223ENST00000497318 SULT1E1P49888 294 aa16.79■□□□□ 0.28
SUPT20H-223ENST00000497318 RNASE9P60153 205 aaKnown RBP16.79■□□□□ 0.28
SUPT20H-223ENST00000497318 SNRPD1P62314 119 aaKnown RBP16.79■□□□□ 0.28
SUPT20H-223ENST00000497318 RAD51Q06609 339 aa16.79■□□□□ 0.28
SUPT20H-223ENST00000497318 ZFP36L1Q07352 338 aaKnown RBP16.79■□□□□ 0.28
SUPT20H-223ENST00000497318 SERINC3Q13530 473 aa16.79■□□□□ 0.28
SUPT20H-223ENST00000497318 BORAQ6PGQ7 559 aa16.79■□□□□ 0.28
SUPT20H-223ENST00000497318 RD3Q7Z3Z2 195 aa16.79■□□□□ 0.28
SUPT20H-223ENST00000497318 PASD1Q8IV76 773 aa16.79■□□□□ 0.28
SUPT20H-223ENST00000497318 Q8N9G6 341 aaPredicted RBP16.79■□□□□ 0.28
SUPT20H-223ENST00000497318 ZNF564Q8TBZ8 553 aaPredicted RBP16.79■□□□□ 0.28
SUPT20H-223ENST00000497318 USP7Q93009 1102 aa16.79■□□□□ 0.28
SUPT20H-223ENST00000497318 HAPLN3Q96S86 360 aa16.79■□□□□ 0.28
SUPT20H-223ENST00000497318 EPAS1Q99814 870 aa16.79■□□□□ 0.28
SUPT20H-223ENST00000497318 GGT7Q9UJ14 662 aa16.79■□□□□ 0.28
SUPT20H-223ENST00000497318 APPL1Q9UKG1 709 aa16.79■□□□□ 0.28
SUPT20H-223ENST00000497318 PNMA8BQ9ULN7 279 aaPredicted RBP16.79■□□□□ 0.28
SUPT20H-223ENST00000497318 PCDHGC3Q9UN70 934 aa16.79■□□□□ 0.28
SUPT20H-223ENST00000497318 BICDL2A1A5D9 508 aa16.78■□□□□ 0.28
SUPT20H-223ENST00000497318 GSRP00390 522 aa16.78■□□□□ 0.28
SUPT20H-223ENST00000497318 ERBB2P04626 1255 aa16.78■□□□□ 0.28
SUPT20H-223ENST00000497318 UGT2B4P06133 528 aa16.78■□□□□ 0.28
SUPT20H-223ENST00000497318 PNLIPP16233 465 aa16.78■□□□□ 0.28
SUPT20H-223ENST00000497318 MAPK10P53779 464 aa16.78■□□□□ 0.28
SUPT20H-223ENST00000497318 CYP4F2P78329 520 aa16.78■□□□□ 0.28
SUPT20H-223ENST00000497318 ARF5P84085 180 aa16.78■□□□□ 0.28
SUPT20H-223ENST00000497318 PTK2Q05397 1052 aa16.78■□□□□ 0.28
SUPT20H-223ENST00000497318 LRRC14Q15048 493 aa16.78■□□□□ 0.28
SUPT20H-223ENST00000497318 MYLK3Q32MK0 819 aa16.78■□□□□ 0.28
SUPT20H-223ENST00000497318 SLC25A52Q3SY17 297 aa16.78■□□□□ 0.28
SUPT20H-223ENST00000497318 SMYD5Q6GMV2 418 aa16.78■□□□□ 0.28
SUPT20H-223ENST00000497318 DTX1Q86Y01 620 aa16.78■□□□□ 0.28
SUPT20H-223ENST00000497318 TRIM59Q8IWR1 403 aa16.78■□□□□ 0.28
SUPT20H-223ENST00000497318 OR2AP1Q8NGE2 309 aa16.78■□□□□ 0.28
SUPT20H-223ENST00000497318 OR6K2Q8NGY2 324 aa16.78■□□□□ 0.28
SUPT20H-223ENST00000497318 SPATA20Q8TB22 786 aa16.78■□□□□ 0.28
SUPT20H-223ENST00000497318 KLHL32Q96NJ5 620 aa16.78■□□□□ 0.28
SUPT20H-223ENST00000497318 RETREG1Q9H6L5 497 aa16.78■□□□□ 0.28
SUPT20H-223ENST00000497318 ANLNQ9NQW6 1124 aa16.78■□□□□ 0.28
SUPT20H-223ENST00000497318 USP9YO00507 2555 aaPredicted RBP16.77■□□□□ 0.28
SUPT20H-223ENST00000497318 USP9XQ93008 2570 aaPredicted RBP16.77■□□□□ 0.28
SUPT20H-223ENST00000497318 GOLGA6L4A6NEF3 574 aa16.77■□□□□ 0.28
SUPT20H-223ENST00000497318 CELA2BP08218 269 aaPredicted RBP16.77■□□□□ 0.28
SUPT20H-223ENST00000497318 GLB1P16278 677 aa16.77■□□□□ 0.28
SUPT20H-223ENST00000497318 ITIH1P19827 911 aa16.77■□□□□ 0.28
SUPT20H-223ENST00000497318 XPAP23025 273 aaPredicted RBP16.77■□□□□ 0.28
SUPT20H-223ENST00000497318 GKP32189 559 aa16.77■□□□□ 0.28
SUPT20H-223ENST00000497318 ATP1A2P50993 1020 aa16.77■□□□□ 0.28
SUPT20H-223ENST00000497318 SUOXP51687 545 aa16.77■□□□□ 0.28
SUPT20H-223ENST00000497318 SRP54P61011 504 aaKnown RBP16.77■□□□□ 0.28
SUPT20H-223ENST00000497318 ARHGEF7Q14155 803 aa16.77■□□□□ 0.28
SUPT20H-223ENST00000497318 CLCA4Q14CN2 919 aa16.77■□□□□ 0.28
SUPT20H-223ENST00000497318 ALG11Q2TAA5 492 aa16.77■□□□□ 0.28
SUPT20H-223ENST00000497318 KLHL40Q2TBA0 621 aa16.77■□□□□ 0.28
SUPT20H-223ENST00000497318 PHF19Q5T6S3 580 aa16.77■□□□□ 0.28
SUPT20H-223ENST00000497318 FOXR2Q6PJQ5 311 aa16.77■□□□□ 0.28
SUPT20H-223ENST00000497318 ENPP7Q6UWV6 458 aa16.77■□□□□ 0.28
SUPT20H-223ENST00000497318 GDPD4Q6W3E5 623 aa16.77■□□□□ 0.28
SUPT20H-223ENST00000497318 DRC7Q8IY82 874 aa16.77■□□□□ 0.28
SUPT20H-223ENST00000497318 NT5C3BQ969T7 300 aa16.77■□□□□ 0.28
SUPT20H-223ENST00000497318 TSACCQ96A04 125 aaPredicted RBP16.77■□□□□ 0.28
SUPT20H-223ENST00000497318 FUCA2Q9BTY2 467 aa16.77■□□□□ 0.28
SUPT20H-223ENST00000497318 MBNL1Q9NR56 388 aaKnown RBP16.77■□□□□ 0.28
SUPT20H-223ENST00000497318 FOXJ2Q9P0K8 574 aa16.77■□□□□ 0.28
SUPT20H-223ENST00000497318 PPARGC1AQ9UBK2 798 aaKnown RBP16.77■□□□□ 0.28
SUPT20H-223ENST00000497318 TUBD1Q9UJT1 453 aa16.77■□□□□ 0.28
SUPT20H-223ENST00000497318 COL27A1Q8IZC6 1860 aaPredicted RBP16.77■□□□□ 0.27
SUPT20H-223ENST00000497318 NBASA2RRP1 2371 aa16.76■□□□□ 0.27
SUPT20H-223ENST00000497318 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.76■□□□□ 0.27
SUPT20H-223ENST00000497318 STMND1H3BQB6 276 aa16.76■□□□□ 0.27
SUPT20H-223ENST00000497318 I6L893 689 aaPredicted RBP16.76■□□□□ 0.27
SUPT20H-223ENST00000497318 ZW10O43264 779 aa16.76■□□□□ 0.27
SUPT20H-223ENST00000497318 TNFP01375 233 aa16.76■□□□□ 0.27
SUPT20H-223ENST00000497318 C1QBPQ07021 282 aaKnown RBP16.76■□□□□ 0.27
SUPT20H-223ENST00000497318 NFATC4Q14934 902 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms