RNA–Protein interactions for RNA: ENST00000496809.5

VPS72-206, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-206ENST00000496809 CLDN6P56747 220 aa12.54□□□□□ -0.4
VPS72-206ENST00000496809 TPI1P60174 286 aa12.54□□□□□ -0.4
VPS72-206ENST00000496809 RPL7AP62424 266 aaKnown RBP12.54□□□□□ -0.4
VPS72-206ENST00000496809 FILIP1LQ4L180 1135 aa12.54□□□□□ -0.4
VPS72-206ENST00000496809 PPP1R15BQ5SWA1 713 aa12.54□□□□□ -0.4
VPS72-206ENST00000496809 CCDC183Q5T5S1 534 aa12.54□□□□□ -0.4
VPS72-206ENST00000496809 CFAP58Q5T655 872 aa12.54□□□□□ -0.4
VPS72-206ENST00000496809 ATXN7L2Q5T6C5 722 aaPredicted RBP12.54□□□□□ -0.4
VPS72-206ENST00000496809 DNAAF5Q86Y56 855 aa12.54□□□□□ -0.4
VPS72-206ENST00000496809 PYROXD2Q8N2H3 581 aa12.54□□□□□ -0.4
VPS72-206ENST00000496809 SNIP1Q8TAD8 396 aaKnown RBP12.54□□□□□ -0.4
VPS72-206ENST00000496809 SCG3Q8WXD2 468 aaKnown RBP12.54□□□□□ -0.4
VPS72-206ENST00000496809 ZNF641Q96N77 438 aaPredicted RBP12.54□□□□□ -0.4
VPS72-206ENST00000496809 MAGEB5Q9BZ81 275 aa12.54□□□□□ -0.4
VPS72-206ENST00000496809 SLC13A1Q9BZW2 595 aa12.54□□□□□ -0.4
VPS72-206ENST00000496809 UBA2Q9UBT2 640 aaPredicted RBP12.54□□□□□ -0.4
VPS72-206ENST00000496809 ARHGAP42A6NI28 874 aa12.53□□□□□ -0.4
VPS72-206ENST00000496809 SMTNL1A8MU46 457 aa12.53□□□□□ -0.4
VPS72-206ENST00000496809 DAPK3O43293 454 aa12.53□□□□□ -0.4
VPS72-206ENST00000496809 RNF8O76064 485 aa12.53□□□□□ -0.4
VPS72-206ENST00000496809 HTR1BP28222 390 aa12.53□□□□□ -0.4
VPS72-206ENST00000496809 PEX5P50542 639 aa12.53□□□□□ -0.4
VPS72-206ENST00000496809 COL9A2Q14055 689 aaPredicted RBP12.53□□□□□ -0.4
VPS72-206ENST00000496809 ACAP1Q15027 740 aa12.53□□□□□ -0.4
VPS72-206ENST00000496809 CDCP2Q5VXM1 449 aa12.53□□□□□ -0.4
VPS72-206ENST00000496809 ERAP2Q6P179 960 aa12.53□□□□□ -0.4
VPS72-206ENST00000496809 BRAT1Q6PJG6 821 aa12.53□□□□□ -0.4
VPS72-206ENST00000496809 IRF2BP2Q7Z5L9 587 aa12.53□□□□□ -0.4
VPS72-206ENST00000496809 VPS36Q86VN1 386 aa12.53□□□□□ -0.4
VPS72-206ENST00000496809 SDR16C5Q8N3Y7 309 aa12.53□□□□□ -0.4
VPS72-206ENST00000496809 WDR48Q8TAF3 677 aa12.53□□□□□ -0.4
VPS72-206ENST00000496809 IFI44Q8TCB0 444 aa12.53□□□□□ -0.4
VPS72-206ENST00000496809 MAPK15Q8TD08 544 aa12.53□□□□□ -0.4
VPS72-206ENST00000496809 LMX1AQ8TE12 382 aa12.53□□□□□ -0.4
VPS72-206ENST00000496809 HMCESQ96FZ2 354 aa12.53□□□□□ -0.4
VPS72-206ENST00000496809 TUBGCP5Q96RT8 1024 aa12.53□□□□□ -0.4
VPS72-206ENST00000496809 NOL6Q9H6R4 1146 aaKnown RBP12.53□□□□□ -0.4
VPS72-206ENST00000496809 APOBEC3BQ9UH17 382 aaKnown RBP12.53□□□□□ -0.4
VPS72-206ENST00000496809 ITM2BQ9Y287 266 aa12.53□□□□□ -0.4
VPS72-206ENST00000496809 URB1O60287 2271 aaKnown RBP12.53□□□□□ -0.4
VPS72-206ENST00000496809 FREM2Q5SZK8 3169 aa12.53□□□□□ -0.4
VPS72-206ENST00000496809 ATRXP46100 2492 aa12.52□□□□□ -0.4
VPS72-206ENST00000496809 TRPM6Q9BX84 2022 aa12.52□□□□□ -0.4
VPS72-206ENST00000496809 KNTC1P50748 2209 aa12.52□□□□□ -0.41
VPS72-206ENST00000496809 BRINP1O60477 761 aa12.52□□□□□ -0.41
VPS72-206ENST00000496809 MMP20O60882 483 aa12.52□□□□□ -0.41
VPS72-206ENST00000496809 NEBLO76041 1014 aa12.52□□□□□ -0.41
VPS72-206ENST00000496809 ANXA6P08133 673 aa12.52□□□□□ -0.41
VPS72-206ENST00000496809 GZMAP12544 262 aa12.52□□□□□ -0.41
VPS72-206ENST00000496809 TIMP2P16035 220 aa12.52□□□□□ -0.41
VPS72-206ENST00000496809 PSMA2P25787 234 aa12.52□□□□□ -0.41
VPS72-206ENST00000496809 EIF4A3P38919 411 aaKnown RBP12.52□□□□□ -0.41
VPS72-206ENST00000496809 CSNK1DP48730 415 aa12.52□□□□□ -0.41
VPS72-206ENST00000496809 PPARDQ03181 441 aa12.52□□□□□ -0.41
VPS72-206ENST00000496809 MAMLD1Q13495 774 aa12.52□□□□□ -0.41
VPS72-206ENST00000496809 NCAPHQ15003 741 aa12.52□□□□□ -0.41
VPS72-206ENST00000496809 LRRC14Q15048 493 aa12.52□□□□□ -0.41
VPS72-206ENST00000496809 NR0B2Q15466 257 aa12.52□□□□□ -0.41
VPS72-206ENST00000496809 UGP2Q16851 508 aa12.52□□□□□ -0.41
VPS72-206ENST00000496809 TBC1D25Q3MII6 688 aa12.52□□□□□ -0.41
VPS72-206ENST00000496809 TMEM52BQ4KMG9 183 aa12.52□□□□□ -0.41
VPS72-206ENST00000496809 PRRT3Q5FWE3 981 aa12.52□□□□□ -0.41
VPS72-206ENST00000496809 ERMARDQ5T6L9 678 aa12.52□□□□□ -0.41
VPS72-206ENST00000496809 FAXCQ5TGI0 409 aa12.52□□□□□ -0.41
VPS72-206ENST00000496809 ESRP1Q6NXG1 681 aaKnown RBP12.52□□□□□ -0.41
VPS72-206ENST00000496809 MACC1Q6ZN28 852 aa12.52□□□□□ -0.41
VPS72-206ENST00000496809 APTXQ7Z2E3 356 aaKnown RBP12.52□□□□□ -0.41
VPS72-206ENST00000496809 PSTKQ8IV42 348 aaKnown RBP12.52□□□□□ -0.41
VPS72-206ENST00000496809 PHACTR4Q8IZ21 702 aa12.52□□□□□ -0.41
VPS72-206ENST00000496809 FSTL5Q8N475 847 aaPredicted RBP12.52□□□□□ -0.41
VPS72-206ENST00000496809 AOPEPQ8N6M6 819 aa12.52□□□□□ -0.41
VPS72-206ENST00000496809 ATL2Q8NHH9 583 aa12.52□□□□□ -0.41
VPS72-206ENST00000496809 NAT6Q93015 286 aa12.52□□□□□ -0.41
VPS72-206ENST00000496809 ZNF578Q96N58 590 aaPredicted RBP12.52□□□□□ -0.41
VPS72-206ENST00000496809 UBL7Q96S82 380 aaPredicted RBP12.52□□□□□ -0.41
VPS72-206ENST00000496809 BPIFA3Q9BQP9 254 aa12.52□□□□□ -0.41
VPS72-206ENST00000496809 SUV39H2Q9H5I1 410 aa12.52□□□□□ -0.41
VPS72-206ENST00000496809 GGT7Q9UJ14 662 aa12.52□□□□□ -0.41
VPS72-206ENST00000496809 AP4E1Q9UPM8 1137 aa12.52□□□□□ -0.41
VPS72-206ENST00000496809 DOCK9Q9BZ29 2069 aa12.51□□□□□ -0.41
VPS72-206ENST00000496809 NBEAQ8NFP9 2946 aa12.51□□□□□ -0.41
VPS72-206ENST00000496809 TSPAN11A1L157 253 aa12.51□□□□□ -0.41
VPS72-206ENST00000496809 CPED1A4D0V7 1026 aa12.51□□□□□ -0.41
VPS72-206ENST00000496809 EME2A4GXA9 379 aaPredicted RBP12.51□□□□□ -0.41
VPS72-206ENST00000496809 LMO7DNF2Z398 122 aa12.51□□□□□ -0.41
VPS72-206ENST00000496809 EEF2KO00418 725 aaKnown RBP12.51□□□□□ -0.41
VPS72-206ENST00000496809 SPINT1O43278 529 aa12.51□□□□□ -0.41
VPS72-206ENST00000496809 TLX3O43711 291 aaPredicted RBP12.51□□□□□ -0.41
VPS72-206ENST00000496809 PRPSAP2O60256 369 aa12.51□□□□□ -0.41
VPS72-206ENST00000496809 PRAMEF11O60813 436 aa12.51□□□□□ -0.41
VPS72-206ENST00000496809 USP12O75317 370 aa12.51□□□□□ -0.41
VPS72-206ENST00000496809 TCEA3O75764 348 aa12.51□□□□□ -0.41
VPS72-206ENST00000496809 ALPIP09923 528 aa12.51□□□□□ -0.41
VPS72-206ENST00000496809 HOXB3P14651 431 aaPredicted RBP12.51□□□□□ -0.41
VPS72-206ENST00000496809 SERPINA4P29622 427 aa12.51□□□□□ -0.41
VPS72-206ENST00000496809 LSSP48449 732 aa12.51□□□□□ -0.41
VPS72-206ENST00000496809 POLR2LP62875 67 aaKnown RBP12.51□□□□□ -0.41
VPS72-206ENST00000496809 TYRO3Q06418 890 aa12.51□□□□□ -0.41
VPS72-206ENST00000496809 EIF2B5Q13144 721 aaKnown RBP12.51□□□□□ -0.41
VPS72-206ENST00000496809 RFTN1Q14699 578 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms