RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 GABRG2P18507 467 aa21.98■■□□□ 1.11
C9orf3-222ENST00000496567 NDUFV2P19404 249 aa21.98■■□□□ 1.11
C9orf3-222ENST00000496567 PSMD8P48556 350 aa21.98■■□□□ 1.11
C9orf3-222ENST00000496567 RPS14P62263 151 aaKnown RBP21.98■■□□□ 1.11
C9orf3-222ENST00000496567 SFSWAPQ12872 951 aaKnown RBP21.98■■□□□ 1.11
C9orf3-222ENST00000496567 MPP3Q13368 585 aa21.98■■□□□ 1.11
C9orf3-222ENST00000496567 ZNF805Q5CZA5 627 aa21.98■■□□□ 1.11
C9orf3-222ENST00000496567 CFAP58Q5T655 872 aa21.98■■□□□ 1.11
C9orf3-222ENST00000496567 HCAR2Q8TDS4 363 aa21.98■■□□□ 1.11
C9orf3-222ENST00000496567 HMGB4Q8WW32 186 aa21.98■■□□□ 1.11
C9orf3-222ENST00000496567 LRRC45Q96CN5 670 aa21.98■■□□□ 1.11
C9orf3-222ENST00000496567 HHIPQ96QV1 700 aa21.98■■□□□ 1.11
C9orf3-222ENST00000496567 DYRK4Q9NR20 520 aa21.98■■□□□ 1.11
C9orf3-222ENST00000496567 BCCIPQ9P287 314 aaKnown RBP eCLIP21.98■■□□□ 1.11
C9orf3-222ENST00000496567 PCDHGC4Q9Y5F7 938 aa21.98■■□□□ 1.11
C9orf3-222ENST00000496567 RAI2Q9Y5P3 530 aa21.98■■□□□ 1.11
C9orf3-222ENST00000496567 F5H423 210 aaPredicted RBP21.97■■□□□ 1.11
C9orf3-222ENST00000496567 PSMD3O43242 534 aa21.97■■□□□ 1.11
C9orf3-222ENST00000496567 GPR37L1O60883 481 aa21.97■■□□□ 1.11
C9orf3-222ENST00000496567 MT-CYBP00156 380 aaPredicted RBP21.97■■□□□ 1.11
C9orf3-222ENST00000496567 ACADMP11310 421 aa21.97■■□□□ 1.11
C9orf3-222ENST00000496567 C5AR1P21730 350 aa21.97■■□□□ 1.11
C9orf3-222ENST00000496567 SLC8A1P32418 973 aa21.97■■□□□ 1.11
C9orf3-222ENST00000496567 PTK6Q13882 451 aa21.97■■□□□ 1.11
C9orf3-222ENST00000496567 JAMLQ86YT9 394 aa21.97■■□□□ 1.11
C9orf3-222ENST00000496567 PGBD3Q8N328 593 aa21.97■■□□□ 1.11
C9orf3-222ENST00000496567 PAF1Q8N7H5 531 aa21.97■■□□□ 1.11
C9orf3-222ENST00000496567 VOPP1Q96AW1 172 aa21.97■■□□□ 1.11
C9orf3-222ENST00000496567 NSMCE3Q96MG7 304 aa21.97■■□□□ 1.11
C9orf3-222ENST00000496567 KLHL32Q96NJ5 620 aa21.97■■□□□ 1.11
C9orf3-222ENST00000496567 RAB6BQ9NRW1 208 aa21.97■■□□□ 1.11
C9orf3-222ENST00000496567 UBP1Q9NZI7 540 aa21.97■■□□□ 1.11
C9orf3-222ENST00000496567 ARIH1Q9Y4X5 557 aaPredicted RBP21.97■■□□□ 1.11
C9orf3-222ENST00000496567 FAM187AA6NFU0 413 aa21.96■■□□□ 1.11
C9orf3-222ENST00000496567 TRAFD1O14545 582 aaPredicted RBP21.96■■□□□ 1.11
C9orf3-222ENST00000496567 TTI1O43156 1089 aa21.96■■□□□ 1.11
C9orf3-222ENST00000496567 HTRA2O43464 458 aaPredicted RBP21.96■■□□□ 1.11
C9orf3-222ENST00000496567 LAMTOR5O43504 91 aa21.96■■□□□ 1.11
C9orf3-222ENST00000496567 ITGB7P26010 798 aa21.96■■□□□ 1.11
C9orf3-222ENST00000496567 AVPR2P30518 371 aa21.96■■□□□ 1.11
C9orf3-222ENST00000496567 TNNT3P45378 269 aaPredicted RBP21.96■■□□□ 1.11
C9orf3-222ENST00000496567 CCDC15Q0P6D6 951 aa21.96■■□□□ 1.11
C9orf3-222ENST00000496567 GPS1Q13098 491 aa21.96■■□□□ 1.11
C9orf3-222ENST00000496567 TTC31Q49AM3 519 aaPredicted RBP21.96■■□□□ 1.11
C9orf3-222ENST00000496567 ANO7Q6IWH7 933 aa21.96■■□□□ 1.11
C9orf3-222ENST00000496567 BRAT1Q6PJG6 821 aa21.96■■□□□ 1.11
C9orf3-222ENST00000496567 C1orf210Q8IVY1 113 aa21.96■■□□□ 1.11
C9orf3-222ENST00000496567 MMGT1Q8N4V1 131 aa21.96■■□□□ 1.11
C9orf3-222ENST00000496567 DTWD2Q8NBA8 298 aa21.96■■□□□ 1.11
C9orf3-222ENST00000496567 OXNAD1Q96HP4 312 aaPredicted RBP21.96■■□□□ 1.11
C9orf3-222ENST00000496567 TDRD1Q9BXT4 1180 aaKnown RBP21.96■■□□□ 1.11
C9orf3-222ENST00000496567 ETNK1Q9HBU6 452 aa21.96■■□□□ 1.11
C9orf3-222ENST00000496567 DKK3Q9UBP4 350 aa21.96■■□□□ 1.11
C9orf3-222ENST00000496567 ASIC3Q9UHC3 531 aa21.96■■□□□ 1.11
C9orf3-222ENST00000496567 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.95■■□□□ 1.11
C9orf3-222ENST00000496567 FAM86C2PA6NEL3 165 aa21.95■■□□□ 1.11
C9orf3-222ENST00000496567 PRR33A8MZF0 331 aa21.95■■□□□ 1.11
C9orf3-222ENST00000496567 E7EVH7 732 aa21.95■■□□□ 1.11
C9orf3-222ENST00000496567 MID1O15344 667 aa21.95■■□□□ 1.11
C9orf3-222ENST00000496567 PMPCBO75439 489 aa21.95■■□□□ 1.11
C9orf3-222ENST00000496567 VPS41P49754 854 aa21.95■■□□□ 1.11
C9orf3-222ENST00000496567 POLR2LP62875 67 aaKnown RBP21.95■■□□□ 1.11
C9orf3-222ENST00000496567 TRAF2Q12933 501 aa21.95■■□□□ 1.11
C9orf3-222ENST00000496567 IHHQ14623 411 aa21.95■■□□□ 1.11
C9orf3-222ENST00000496567 ARMC12Q5T9G4 340 aa21.95■■□□□ 1.11
C9orf3-222ENST00000496567 KIAA1324Q6UXG2 1013 aaKnown RBP21.95■■□□□ 1.11
C9orf3-222ENST00000496567 RASSF3Q86WH2 238 aa21.95■■□□□ 1.11
C9orf3-222ENST00000496567 CACUL1Q86Y37 369 aa21.95■■□□□ 1.11
C9orf3-222ENST00000496567 KLHDC8BQ8IXV7 354 aa21.95■■□□□ 1.11
C9orf3-222ENST00000496567 TAB3Q8N5C8 712 aaPredicted RBP21.95■■□□□ 1.11
C9orf3-222ENST00000496567 PDCD6IPQ8WUM4 868 aaKnown RBP21.95■■□□□ 1.11
C9orf3-222ENST00000496567 ECHDC3Q96DC8 303 aa21.95■■□□□ 1.11
C9orf3-222ENST00000496567 GORASP1Q9BQQ3 440 aa21.95■■□□□ 1.11
C9orf3-222ENST00000496567 C1QTNF1Q9BXJ1 281 aa21.95■■□□□ 1.11
C9orf3-222ENST00000496567 SLC6A17Q9H1V8 727 aa21.95■■□□□ 1.11
C9orf3-222ENST00000496567 PABPC3Q9H361 631 aaKnown RBP21.95■■□□□ 1.11
C9orf3-222ENST00000496567 C11orf16Q9NQ32 467 aa21.95■■□□□ 1.11
C9orf3-222ENST00000496567 EBF1Q9UH73 591 aa21.95■■□□□ 1.11
C9orf3-222ENST00000496567 ERI2A8K979 691 aaKnown RBP21.95■■□□□ 1.1
C9orf3-222ENST00000496567 RAD51CO43502 376 aa21.95■■□□□ 1.1
C9orf3-222ENST00000496567 WNT3AP56704 352 aa21.95■■□□□ 1.1
C9orf3-222ENST00000496567 BASP1P80723 227 aaKnown RBP21.95■■□□□ 1.1
C9orf3-222ENST00000496567 SEMA5AQ13591 1074 aa21.95■■□□□ 1.1
C9orf3-222ENST00000496567 PCSK7Q16549 785 aa21.95■■□□□ 1.1
C9orf3-222ENST00000496567 POM121L1PQ3SYA9 428 aa21.95■■□□□ 1.1
C9orf3-222ENST00000496567 FAXCQ5TGI0 409 aa21.95■■□□□ 1.1
C9orf3-222ENST00000496567 C8orf74Q6P047 294 aa21.95■■□□□ 1.1
C9orf3-222ENST00000496567 KDELC1Q6UW63 502 aa21.95■■□□□ 1.1
C9orf3-222ENST00000496567 MDGA1Q8NFP4 955 aa21.95■■□□□ 1.1
C9orf3-222ENST00000496567 SPOCK2Q92563 424 aa21.95■■□□□ 1.1
C9orf3-222ENST00000496567 IFT43Q96FT9 208 aa21.95■■□□□ 1.1
C9orf3-222ENST00000496567 OMDQ99983 421 aa21.95■■□□□ 1.1
C9orf3-222ENST00000496567 MLPHQ9BV36 600 aaPredicted RBP21.95■■□□□ 1.1
C9orf3-222ENST00000496567 FSD1LQ9BXM9 530 aa21.95■■□□□ 1.1
C9orf3-222ENST00000496567 PRMT8Q9NR22 394 aaPredicted RBP21.95■■□□□ 1.1
C9orf3-222ENST00000496567 PCDHB9Q9Y5E1 797 aa21.95■■□□□ 1.1
C9orf3-222ENST00000496567 ANKRD36A6QL64 1941 aa21.94■■□□□ 1.1
C9orf3-222ENST00000496567 TSPAN11A1L157 253 aa21.94■■□□□ 1.1
C9orf3-222ENST00000496567 K7ESF4 209 aa21.94■■□□□ 1.1
C9orf3-222ENST00000496567 PGLSO95336 258 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms