RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 SLC10A7Q0GE19 358 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 USP4Q13107 963 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 PUS10Q3MIT2 529 aaKnown RBP9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 Q7L0L9 218 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 RASGEF1CQ8N431 466 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 TBC1D19Q8N5T2 526 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 CNOT10Q9H9A5 744 aaKnown RBP9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 ELOVL2Q9NXB9 296 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 CD84Q9UIB8 345 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 NDST3O95803 873 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 LATS1O95835 1130 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 DLDP09622 509 aaKnown RBP9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 CD151P48509 253 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 SEMG2Q02383 582 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 IMPG1Q17R60 797 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 RAB41Q5JT25 222 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 PRPF38BQ5VTL8 546 aaKnown RBP9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 ARCQ7LC44 396 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 DCAF4L2Q8NA75 395 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 KLK6Q92876 244 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 KLF16Q9BXK1 252 aaPredicted RBP9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 CAPS2Q9BXY5 557 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 NUMBLQ9Y6R0 609 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 SLC31A1O15431 190 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 SLC25A14O95258 325 aaPredicted RBP9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 PIGNO95427 931 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 MZF1P28698 734 aaPredicted RBP9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 SSTR1P30872 391 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 PLEKHG6Q3KR16 790 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 RAB6CQ53S08 254 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 C6orf163Q5TEZ5 329 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 GDPD4Q6W3E5 623 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 ZNF599Q96NL3 588 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 RAB6CQ9H0N0 254 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 PPCSQ9HAB8 311 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 ZDHHC4Q9NPG8 344 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 THEGQ9P2T0 379 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 APPL1Q9UKG1 709 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 NCF1BA6NI72 391 aaPredicted RBP9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 NCF1CA8MVU1 366 aaPredicted RBP9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 PRPF4O43172 522 aaKnown RBP eCLIP9.54□□□□□ -0.889e-6■□□□□ 10.5
GAPVD1-219ENST00000495955 AVILO75366 819 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 ERVK-10P10266 1014 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 NCF1P14598 390 aaPredicted RBP9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 ADRA1DP25100 572 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 FAM83EQ2M2I3 478 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 AFTPHQ6ULP2 937 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 GAREM2Q75VX8 874 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 NUDCD3Q8IVD9 361 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 GPR65Q8IYL9 337 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 ZCCHC9Q8N567 271 aaKnown RBP9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 ABCG8Q9H221 673 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 FAM96AQ9H5X1 160 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 SYBUQ9NX95 663 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 GMNNO75496 209 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 ESRRBO95718 433 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 HALP42357 657 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 PPIDQ08752 370 aaKnown RBP9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 CERCAMQ5T4B2 595 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 ZNF776Q68DI1 518 aaPredicted RBP9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 KLHDC10Q6PID8 442 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 CAMK1DQ8IU85 385 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 PCDH20Q8N6Y1 951 aaKnown RBP9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 OR2AP1Q8NGE2 309 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 SGF29Q96ES7 293 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 CHMP6Q96FZ7 201 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 FEM1AQ9BSK4 669 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 CRISPLD1Q9H336 500 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 PABPC3Q9H361 631 aaKnown RBP9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 GPAMQ9HCL2 828 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 TDRKHQ9Y2W6 561 aaKnown RBP9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 ARIH1Q9Y4X5 557 aaPredicted RBP9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 USP3Q9Y6I4 520 aa9.54□□□□□ -0.88
GAPVD1-219ENST00000495955 BANF1O75531 89 aa9.53□□□□□ -0.88
GAPVD1-219ENST00000495955 PRKCGP05129 697 aa9.53□□□□□ -0.88
GAPVD1-219ENST00000495955 HSD17B3P37058 310 aa9.53□□□□□ -0.88
GAPVD1-219ENST00000495955 PEX5P50542 639 aa9.53□□□□□ -0.88
GAPVD1-219ENST00000495955 TNK2Q07912 1038 aa9.53□□□□□ -0.88
GAPVD1-219ENST00000495955 MRPL58Q14197 206 aaKnown RBP9.53□□□□□ -0.88
GAPVD1-219ENST00000495955 TANGO2Q6ICL3 276 aa9.53□□□□□ -0.88
GAPVD1-219ENST00000495955 NEPROQ6NW34 567 aa9.53□□□□□ -0.88
GAPVD1-219ENST00000495955 C22orf39Q6P5X5 142 aa9.53□□□□□ -0.88
GAPVD1-219ENST00000495955 ARHGAP36Q6ZRI8 547 aa9.53□□□□□ -0.88
GAPVD1-219ENST00000495955 TSEN2Q8NCE0 465 aaKnown RBP9.53□□□□□ -0.88
GAPVD1-219ENST00000495955 SORCS1Q8WY21 1168 aa9.53□□□□□ -0.88
GAPVD1-219ENST00000495955 RNF112Q9ULX5 631 aa9.53□□□□□ -0.88
GAPVD1-219ENST00000495955 DNAJC16Q9Y2G8 782 aa9.53□□□□□ -0.88
GAPVD1-219ENST00000495955 TCRBV21S2A2A0A5A6 115 aa9.53□□□□□ -0.88
GAPVD1-219ENST00000495955 APOA4P06727 396 aa9.53□□□□□ -0.88
GAPVD1-219ENST00000495955 HOXA9P31269 272 aa9.53□□□□□ -0.88
GAPVD1-219ENST00000495955 MC4RP32245 332 aa9.53□□□□□ -0.88
GAPVD1-219ENST00000495955 DHPSP49366 369 aaPredicted RBP9.53□□□□□ -0.88
GAPVD1-219ENST00000495955 STK19P49842 368 aaPredicted RBP9.53□□□□□ -0.88
GAPVD1-219ENST00000495955 STX1BP61266 288 aa9.53□□□□□ -0.88
GAPVD1-219ENST00000495955 SLC7A9P82251 487 aa9.53□□□□□ -0.88
GAPVD1-219ENST00000495955 CCDC121Q6ZUS5 278 aa9.53□□□□□ -0.88
GAPVD1-219ENST00000495955 PAFAH2Q99487 392 aa9.53□□□□□ -0.88
GAPVD1-219ENST00000495955 SUV39H2Q9H5I1 410 aa9.53□□□□□ -0.88
GAPVD1-219ENST00000495955 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.53□□□□□ -0.88
GAPVD1-219ENST00000495955 FBXL12Q9NXK8 326 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms