RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 MAP3K21Q5TCX8 1036 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 ARCQ7LC44 396 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 CDK15Q96Q40 435 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 NPY6RQ99463 290 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 HNRNPABQ99729 332 aaKnown RBP13.57□□□□□ -0.24
GPC1-209ENST00000495100 CCT7Q99832 543 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 BRWD3Q6RI45 1802 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 H3BMM5 538 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 ANGPT2O15123 496 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 GSSP48637 474 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 CPT1AP50416 773 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 RAB10P61026 200 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 MS4A2Q01362 244 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 RBM44Q6ZP01 1051 aaKnown RBP13.57□□□□□ -0.24
GPC1-209ENST00000495100 CHST15Q7LFX5 561 aaPredicted RBP13.57□□□□□ -0.24
GPC1-209ENST00000495100 LRTOMTQ8WZ04 291 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 VPS33AQ96AX1 596 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 TMEM79Q9BSE2 394 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 AP4B1Q9Y6B7 739 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 UNC80Q8N2C7 3258 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 C15orf38-AP3S2A0A0A6YYH1 394 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 STRNO43815 780 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 ME2P23368 584 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 CCNIQ14094 377 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 CCDC153Q494R4 210 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 IQSEC1Q6DN90 963 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 MARK2Q7KZI7 788 aaKnown RBP13.57□□□□□ -0.24
GPC1-209ENST00000495100 ARPINQ7Z6K5 226 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 PTGR2Q8N8N7 351 aaPredicted RBP13.57□□□□□ -0.24
GPC1-209ENST00000495100 SHCBP1Q8NEM2 672 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 ZMIZ2Q8NF64 920 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 OR10Q1Q8NGQ4 319 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 NUDT8Q8WV74 236 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 ARHGAP39Q9C0H5 1083 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 FBXW11Q9UKB1 542 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 HEMK1Q9Y5R4 338 aaPredicted RBP13.57□□□□□ -0.24
GPC1-209ENST00000495100 A0A1B0GTW7 788 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 PIRO00625 290 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 MRASO14807 208 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 SPATA31D3P0C874 917 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 HAPLN1P10915 354 aaPredicted RBP13.56□□□□□ -0.24
GPC1-209ENST00000495100 PRKAA1Q13131 559 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 SPATA31D4Q6ZUB0 917 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 PPP2R3CQ969Q6 453 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 HMCESQ96FZ2 354 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 DCUN1D1Q96GG9 259 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 TEKT5Q96M29 485 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 EGFL8Q99944 293 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 CCDC90BQ9GZT6 254 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 SSU72Q9NP77 194 aaKnown RBP13.56□□□□□ -0.24
GPC1-209ENST00000495100 PCDHGC4Q9Y5F7 938 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 LY75O60449 1722 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 PSMD12O00232 456 aaPredicted RBP13.56□□□□□ -0.24
GPC1-209ENST00000495100 FFAR3O14843 346 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 BIRC5O15392 142 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 GPR42O15529 346 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 FYNP06241 537 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 LHX1P48742 406 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 GATMP50440 423 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 CTXN3Q4LDR2 81 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 LIPMQ5VYY2 423 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 C16orf89Q6UX73 402 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 OFCC1Q8IZS5 231 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 CRYBG2Q8N1P7 616 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 LPCAT1Q8NF37 534 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 ZNF483Q8TF39 744 aaPredicted RBP13.56□□□□□ -0.24
GPC1-209ENST00000495100 VPS50Q96JG6 964 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 NSUN5Q96P11 429 aaKnown RBP13.56□□□□□ -0.24
GPC1-209ENST00000495100 ACOX2Q99424 681 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 PTPN18Q99952 460 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 TBCDQ9BTW9 1192 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 MRPL46Q9H2W6 279 aaKnown RBP13.56□□□□□ -0.24
GPC1-209ENST00000495100 Q9H521 79 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 GLOD4Q9HC38 313 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 GMIPQ9P107 970 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 RGSL1A5PLK6 1076 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 IQCF5A8MTL0 148 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 HACD1B0YJ81 288 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 UBXN8O00124 270 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 NDUFS3O75489 264 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 WFS1O76024 890 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 ANXA9O76027 345 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 CNTFP26441 200 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 LRPAP1P30533 357 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 PSME3P61289 254 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 MAP7Q14244 749 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 PLCL1Q15111 1095 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 ALFQ53S48 1182 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 IL23RQ5VWK5 629 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 GDF6Q6KF10 455 aaPredicted RBP13.56□□□□□ -0.24
GPC1-209ENST00000495100 ZC3HC1Q86WB0 502 aaKnown RBP13.56□□□□□ -0.24
GPC1-209ENST00000495100 TXNDC5Q8NBS9 432 aaKnown RBP13.56□□□□□ -0.24
GPC1-209ENST00000495100 OR7D4Q8NG98 312 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 OR10T2Q8NGX3 314 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 TMEM174Q8WUU8 243 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 CATSPERBQ9H7T0 1116 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 NMUR1Q9HB89 426 aa13.56□□□□□ -0.24
GPC1-209ENST00000495100 EVLQ9UI08 416 aaPredicted RBP13.56□□□□□ -0.24
GPC1-209ENST00000495100 GNEQ9Y223 722 aaKnown RBP13.56□□□□□ -0.24
GPC1-209ENST00000495100 AAR2Q9Y312 384 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms